RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
LINC00554-201ENST00000564841 JMJD7-PLA2G4BH0Y9G9 81 aa11.25□□□□□ -0.61
LINC00554-201ENST00000564841 STAB1Q9NY15 2570 aa11.25□□□□□ -0.61
LINC00554-201ENST00000564841 MAST4O15021 2626 aa11.24□□□□□ -0.61
LINC00554-201ENST00000564841 TRGV2A0A075B6R0 118 aa11.23□□□□□ -0.61
LINC00554-201ENST00000564841 LINC01547P58512 204 aaPredicted RBP11.23□□□□□ -0.61
LINC00554-201ENST00000564841 C9orf116Q5BN46 136 aaPredicted RBP11.23□□□□□ -0.61
LINC00554-201ENST00000564841 Q8NDZ9 215 aa11.23□□□□□ -0.61
LINC00554-201ENST00000564841 TMEM256-PLSCR3K7ERE1 68 aa11.23□□□□□ -0.61
LINC00554-201ENST00000564841 C6orf99Q4VX62 202 aa11.23□□□□□ -0.61
LINC00554-201ENST00000564841 TRAV7A0A075B6U4 112 aa11.22□□□□□ -0.61
LINC00554-201ENST00000564841 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
LINC00554-201ENST00000564841 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
LINC00554-201ENST00000564841 TM2D3Q9BRN9 247 aa11.22□□□□□ -0.61
LINC00554-201ENST00000564841 TRBV10-1A0A0K0K1A3 114 aa11.22□□□□□ -0.61
LINC00554-201ENST00000564841 KRTAP10-3P60369 221 aa11.22□□□□□ -0.61
LINC00554-201ENST00000564841 BRK1Q8WUW1 75 aa11.22□□□□□ -0.61
LINC00554-201ENST00000564841 A0A096LPF7 62 aa11.21□□□□□ -0.61
LINC00554-201ENST00000564841 A0A087WZ39 114 aa11.21□□□□□ -0.62
LINC00554-201ENST00000564841 LINC00167Q96N53 147 aa11.21□□□□□ -0.62
LINC00554-201ENST00000564841 LAMTOR3Q9UHA4 124 aa11.2□□□□□ -0.62
LINC00554-201ENST00000564841 Q6ZQT0 140 aa11.19□□□□□ -0.62
LINC00554-201ENST00000564841 Q6ZVQ6 151 aa11.19□□□□□ -0.62
LINC00554-201ENST00000564841 MPLKIPQ8TAP9 179 aa11.19□□□□□ -0.62
LINC00554-201ENST00000564841 TRBV7-6A0A0J9YX20 115 aa11.19□□□□□ -0.62
LINC00554-201ENST00000564841 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
LINC00554-201ENST00000564841 KLKP1Q107X0 134 aa11.18□□□□□ -0.62
LINC00554-201ENST00000564841 DEFB130BP0DP73 79 aa11.18□□□□□ -0.62
LINC00554-201ENST00000564841 DEFB130AP0DP74 79 aa11.18□□□□□ -0.62
LINC00554-201ENST00000564841 Q8N3U1 123 aa11.18□□□□□ -0.62
LINC00554-201ENST00000564841 IL17DQ8TAD2 202 aa11.17□□□□□ -0.62
LINC00554-201ENST00000564841 SMIM26A0A096LP01 95 aa11.17□□□□□ -0.62
LINC00554-201ENST00000564841 LINC00959A0A1B0GUT2 108 aa11.17□□□□□ -0.62
LINC00554-201ENST00000564841 TRBV10-3A0A0K0K1G6 114 aa11.16□□□□□ -0.62
LINC00554-201ENST00000564841 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
LINC00554-201ENST00000564841 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
LINC00554-201ENST00000564841 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.62
LINC00554-201ENST00000564841 GIG44P09565 113 aaPredicted RBP11.14□□□□□ -0.63
LINC00554-201ENST00000564841 Q8N9L7 120 aa11.14□□□□□ -0.63
LINC00554-201ENST00000564841 BAHCC1Q9P281 2608 aa11.13□□□□□ -0.63
LINC00554-201ENST00000564841 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
LINC00554-201ENST00000564841 IGLV10-54A0A075B6I4 117 aa11.13□□□□□ -0.63
LINC00554-201ENST00000564841 NOTCH1P46531 2555 aa11.13□□□□□ -0.63
LINC00554-201ENST00000564841 DEFB4AO15263 64 aa11.12□□□□□ -0.63
LINC00554-201ENST00000564841 LINC00269Q8N2A0 174 aa11.12□□□□□ -0.63
LINC00554-201ENST00000564841 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
LINC00554-201ENST00000564841 LINC00575Q6W349 94 aa11.11□□□□□ -0.63
LINC00554-201ENST00000564841 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
LINC00554-201ENST00000564841 PLAC8L1A1L4L8 177 aa11.11□□□□□ -0.63
LINC00554-201ENST00000564841 Q6ZQY7 126 aa11.1□□□□□ -0.63
LINC00554-201ENST00000564841 FBN1P35555 2871 aaKnown RBP11.09□□□□□ -0.63
LINC00554-201ENST00000564841 MIFP14174 115 aa11.08□□□□□ -0.64
LINC00554-201ENST00000564841 TRBV7-4A0A0J9YYF1 115 aa11.07□□□□□ -0.64
LINC00554-201ENST00000564841 ZNF561-AS1K7EIQ3 104 aa11.06□□□□□ -0.64
LINC00554-201ENST00000564841 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.06□□□□□ -0.64
LINC00554-201ENST00000564841 DAD1P61803 113 aa11.06□□□□□ -0.64
LINC00554-201ENST00000564841 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
LINC00554-201ENST00000564841 NREPQ16612 68 aa11.05□□□□□ -0.64
LINC00554-201ENST00000564841 Q8IZM0 81 aa11.05□□□□□ -0.64
LINC00554-201ENST00000564841 C6orf223Q8N319 242 aa11.05□□□□□ -0.64
LINC00554-201ENST00000564841 C10orf25Q5T742 122 aa11.04□□□□□ -0.64
LINC00554-201ENST00000564841 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
LINC00554-201ENST00000564841 LOC110117498A0A087WWA1 95 aa11.04□□□□□ -0.64
LINC00554-201ENST00000564841 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
LINC00554-201ENST00000564841 C1orf195Q5TG92 126 aa11.03□□□□□ -0.64
LINC00554-201ENST00000564841 TMEM254Q8TBM7 123 aa11.03□□□□□ -0.64
LINC00554-201ENST00000564841 MUC7Q8TAX7 377 aa11.03□□□□□ -0.64
LINC00554-201ENST00000564841 NBEAL1Q6ZS30 2694 aa11.03□□□□□ -0.64
LINC00554-201ENST00000564841 BPY2O14599 106 aa11.01□□□□□ -0.65
LINC00554-201ENST00000564841 F8WDY8 70 aa11.01□□□□□ -0.65
LINC00554-201ENST00000564841 GYPEP15421 78 aa11□□□□□ -0.65
LINC00554-201ENST00000564841 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
LINC00554-201ENST00000564841 BCE1O60756 84 aa10.99□□□□□ -0.65
LINC00554-201ENST00000564841 CXCL6P80162 114 aa10.99□□□□□ -0.65
LINC00554-201ENST00000564841 C16orf74Q96GX8 76 aa10.99□□□□□ -0.65
LINC00554-201ENST00000564841 SEC61GP60059 68 aa10.98□□□□□ -0.65
LINC00554-201ENST00000564841 DEFB135Q30KP9 77 aa10.98□□□□□ -0.65
LINC00554-201ENST00000564841 CSNK1G2-AS1Q8NCQ2 148 aa10.97□□□□□ -0.65
LINC00554-201ENST00000564841 HIGD2AQ9BW72 106 aa10.97□□□□□ -0.65
LINC00554-201ENST00000564841 V9GYY9 64 aa10.97□□□□□ -0.65
LINC00554-201ENST00000564841 XAGE1AQ9HD64 81 aa10.96□□□□□ -0.65
LINC00554-201ENST00000564841 CHCHD10Q8WYQ3 142 aaPredicted RBP10.96□□□□□ -0.66
LINC00554-201ENST00000564841 HTN3P15516 51 aa10.95□□□□□ -0.66
LINC00554-201ENST00000564841 CMC4P56277 68 aaPredicted RBP10.95□□□□□ -0.66
LINC00554-201ENST00000564841 NDUFC1O43677 76 aa10.94□□□□□ -0.66
LINC00554-201ENST00000564841 CD164L2Q6UWJ8 174 aa10.94□□□□□ -0.66
LINC00554-201ENST00000564841 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
LINC00554-201ENST00000564841 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
LINC00554-201ENST00000564841 C9orf66Q5T8R8 295 aa10.93□□□□□ -0.66
LINC00554-201ENST00000564841 CELA1Q9UNI1 258 aa10.92□□□□□ -0.66
LINC00554-201ENST00000564841 MGAM2Q2M2H8 2515 aa10.91□□□□□ -0.66
LINC00554-201ENST00000564841 PRYO14603 147 aa10.91□□□□□ -0.66
LINC00554-201ENST00000564841 FUSP35637 526 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC00554-201ENST00000564841 CYSRT1A8MQ03 144 aa10.9□□□□□ -0.66
LINC00554-201ENST00000564841 C3orf84H3BNL1 204 aa10.9□□□□□ -0.66
LINC00554-201ENST00000564841 COX17Q14061 63 aa10.9□□□□□ -0.66
LINC00554-201ENST00000564841 Q6ZTC4 211 aa10.9□□□□□ -0.66
LINC00554-201ENST00000564841 PRB2P02812 416 aaPredicted RBP10.9□□□□□ -0.66
LINC00554-201ENST00000564841 ESRGQ1W209 222 aa10.9□□□□□ -0.66
LINC00554-201ENST00000564841 IGLV6-57P01721 117 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms