RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PTPRQQ9UMZ3 2332 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 MED13LQ71F56 2210 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 DOCK11Q5JSL3 2073 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 MYH7P12883 1935 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 LAMB1P07942 1786 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 WDFY3Q8IZQ1 3526 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 LY75O60449 1722 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 KNDC1Q76NI1 1749 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 KIAA1551Q9HCM1 1747 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 NRXN2Q9P2S2 1712 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 CRYBG1Q9Y4K1 1723 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 QRICH2Q9H0J4 1663 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 FAM208AQ9UK61 1670 aaKnown RBP0.5□□□□□ -2.33
LINC00557-201ENST00000563184 LOC400499M0QZD8 3231 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 PDZD2O15018 2839 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 NBEAL2Q6ZNJ1 2754 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 NSD1Q96L73 2696 aaPredicted RBP0.5□□□□□ -2.33
LINC00557-201ENST00000563184 GVQW2A0A096LPI5 108 aaPredicted RBP0.5□□□□□ -2.33
LINC00557-201ENST00000563184 TRGV1A0A0A0MS02 117 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 NDUFC1O43677 76 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 LY6G6CO95867 125 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 APOC3P02656 99 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 ACYP2P14621 99 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 CCL18P55774 89 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 GNG11P61952 73 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 COX17Q14061 63 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 Q6ZRX8 168 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 FAM167A-AS1Q96KT0 104 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 Q96NJ1 140 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 DPY30Q9C005 99 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 PLAC8Q9NZF1 115 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 Q9Y3F1 56 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 TLN2Q9Y4G6 2542 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 RELNP78509 3460 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 ABCA1O95477 2261 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 VPS13CQ709C8 3753 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 AKAP13Q12802 2813 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 UTP20O75691 2785 aaKnown RBP0.5□□□□□ -2.33
LINC00557-201ENST00000563184 BTAF1O14981 1849 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 SPEF2Q9C093 1822 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 HIVEP1P15822 2718 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 KDM3BQ7LBC6 1761 aa0.5□□□□□ -2.33
LINC00557-201ENST00000563184 GCC2Q8IWJ2 1684 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 DUOX1Q9NRD9 1551 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 NBPF19A0A087WUL8 3843 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 AHCTF1Q8WYP5 2266 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 CADP27708 2225 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 CELSR3Q9NYQ7 3312 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 FLNAP21333 2647 aaKnown RBP0.49□□□□□ -2.33
LINC00557-201ENST00000563184 F8VRH5 84 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 M0R135 149 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 UQCR11O14957 56 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 COX6CP09669 75 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 GCHFRP30047 84 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 S100A3P33764 101 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 SPINK7P58062 85 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 PKIAP61925 76 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 BAGE2Q86Y30 109 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 RYR1P21817 5038 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 UBR3Q6ZT12 1888 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 ATMQ13315 3056 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 MAP2P11137 1827 aaKnown RBP0.49□□□□□ -2.33
LINC00557-201ENST00000563184 HIVEP3Q5T1R4 2406 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 MGAQ8IWI9 3026 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 SPTBN1Q01082 2364 aaKnown RBP0.49□□□□□ -2.33
LINC00557-201ENST00000563184 RGPD8O14715 1765 aaPredicted RBP0.49□□□□□ -2.33
LINC00557-201ENST00000563184 RGPD5Q99666 1765 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 APC2O95996 2303 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 ACACAQ13085 2346 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 ITSN1Q15811 1721 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 ANK2Q01484 3957 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 SCN7AQ01118 1682 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 LAMA1P25391 3075 aa0.49□□□□□ -2.33
LINC00557-201ENST00000563184 CELSR2Q9HCU4 2923 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 BIRC6Q9NR09 4857 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 F8P00451 2351 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 MAP1AP78559 2803 aaPredicted RBP0.48□□□□□ -2.33
LINC00557-201ENST00000563184 CSPG4Q6UVK1 2322 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 AFDNP55196 1824 aaKnown RBP0.48□□□□□ -2.33
LINC00557-201ENST00000563184 BCORQ6W2J9 1755 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 BOD1L1Q8NFC6 3051 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 TOGARAM1Q9Y4F4 1720 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 CHKB-CPT1BH3BT56 60 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 HMGN4O00479 90 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 SFT2D2O95562 160 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 SNCAP37840 140 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 COL5A1-AS1Q5SY13 56 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 CRYBG3Q68DQ2 2970 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 CDC42SE2Q9NRR3 84 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 NDUFA4L2Q9NRX3 87 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 PRO1854Q9UHT4 67 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 LINC01558Q9Y6Z2 57 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 MGAM2Q2M2H8 2515 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 TACC2O95359 2948 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 PRRC2CQ9Y520 2896 aaKnown RBP0.48□□□□□ -2.33
LINC00557-201ENST00000563184 ACANP16112 2415 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 MEGF8Q7Z7M0 2845 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 CSMD1Q96PZ7 3565 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 ADGRG4Q8IZF6 3080 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 URB1O60287 2271 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms