RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	TRBV30	A0A0K0K1B3	111 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	IGIP	A6NJ69	53 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	NDUFC2-KCTD14	E9PQ53	114 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	MT-ND4L	P03901	98 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	KRTAP1-4	P0C5Y4	121 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	IFITM2	Q01629	132 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071		Q6ZN92	141 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	PACRG	Q96M98	296 aa	Predicted RBP	4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	AMELX	Q99217	191 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	C2orf88	Q9BSF0	95 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	XAGE1A	Q9HD64	81 aa		4.2	□□□□□ -1.74
MARK3-223	ENST00000561071	CKS1B	P61024	79 aa		4.19	□□□□□ -1.74
MARK3-223	ENST00000561071	C6orf226	Q5I0X4	101 aa		4.19	□□□□□ -1.74
MARK3-223	ENST00000561071	CDKN2A-AS1	Q9UH64	79 aa		4.19	□□□□□ -1.74
MARK3-223	ENST00000561071	LAMTOR2	Q9Y2Q5	125 aa		4.19	□□□□□ -1.74
MARK3-223	ENST00000561071	ADCYAP1	P18509	176 aa		4.18	□□□□□ -1.74
MARK3-223	ENST00000561071	ORMDL2	Q53FV1	153 aa		4.18	□□□□□ -1.74
MARK3-223	ENST00000561071	LINC01561	Q8N1V8	128 aa		4.18	□□□□□ -1.74
MARK3-223	ENST00000561071	C22orf24	Q9Y442	160 aa		4.18	□□□□□ -1.74
MARK3-223	ENST00000561071	RAB14	P61106	215 aa		4.17	□□□□□ -1.74
MARK3-223	ENST00000561071	CXCL6	P80162	114 aa		4.17	□□□□□ -1.74
MARK3-223	ENST00000561071		Q8IZM0	81 aa		4.17	□□□□□ -1.74
MARK3-223	ENST00000561071	SLC7A5P1	Q8MH63	180 aa		4.17	□□□□□ -1.74
MARK3-223	ENST00000561071	GEMIN7	Q9H840	131 aa	Known RBP	4.17	□□□□□ -1.74
MARK3-223	ENST00000561071	NXT2	Q9NPJ8	142 aa	Known RBP	4.17	□□□□□ -1.74
MARK3-223	ENST00000561071	IGLV1-50	A0A075B6I6	118 aa		4.16	□□□□□ -1.74
MARK3-223	ENST00000561071	HERVK_113	P63121	156 aa		4.16	□□□□□ -1.74
MARK3-223	ENST00000561071	FAM19A3	Q7Z5A8	133 aa		4.16	□□□□□ -1.74
MARK3-223	ENST00000561071	TOMM6	Q96B49	74 aa		4.16	□□□□□ -1.74
MARK3-223	ENST00000561071	SCGB3A1	Q96QR1	104 aa		4.16	□□□□□ -1.74
MARK3-223	ENST00000561071	KRTAP9-6	A8MVA2	160 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071		F8VRH5	84 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071	ZNF861P	O60384	105 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071	TSPAN13	O95857	204 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071	RAB5B	P61020	215 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071	PRR4	Q16378	134 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071	ERAS	Q7Z444	233 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071	TIMM17A	Q99595	171 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071	ANAPC11	Q9NYG5	84 aa		4.15	□□□□□ -1.75
MARK3-223	ENST00000561071		K7EMI3	77 aa		4.14	□□□□□ -1.75
MARK3-223	ENST00000561071	SCO1	O75880	301 aa		4.14	□□□□□ -1.75
MARK3-223	ENST00000561071	SPINK8	P0C7L1	97 aa		4.14	□□□□□ -1.75
MARK3-223	ENST00000561071	CLLU1	Q5K131	121 aa		4.14	□□□□□ -1.75
MARK3-223	ENST00000561071	MRPL55	Q7Z7F7	128 aa	Known RBP	4.14	□□□□□ -1.75
MARK3-223	ENST00000561071	COX7B2	Q8TF08	81 aa		4.14	□□□□□ -1.75
MARK3-223	ENST00000561071	LINC00167	Q96N53	147 aa		4.14	□□□□□ -1.75
MARK3-223	ENST00000561071	CST9L	Q9H4G1	147 aa		4.14	□□□□□ -1.75
MARK3-223	ENST00000561071	TINCR	A0A1B0GVN0	87 aa		4.13	□□□□□ -1.75
MARK3-223	ENST00000561071	TMEM218	A2RU14	115 aa		4.13	□□□□□ -1.75
MARK3-223	ENST00000561071	G0S2	P27469	103 aa		4.13	□□□□□ -1.75
MARK3-223	ENST00000561071	SEC11A	P67812	179 aa		4.13	□□□□□ -1.75
MARK3-223	ENST00000561071	PDZD11	Q5EBL8	140 aa		4.13	□□□□□ -1.75
MARK3-223	ENST00000561071	MUC2	Q02817	5179 aa		4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	LOC105371267	A0A1B0GV96	52 aa		4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	LINC01546	A6NGU7	62 aa		4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	NUPR1	O60356	82 aa		4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	BCE1	O60756	84 aa		4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	RPL13A	P40429	203 aa	Known RBP	4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	FABP9	Q0Z7S8	132 aa		4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	GNB1L	Q9BYB4	327 aa		4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.12	□□□□□ -1.75
MARK3-223	ENST00000561071	S100P	P25815	95 aa		4.11	□□□□□ -1.75
MARK3-223	ENST00000561071	PFN2	P35080	140 aa		4.11	□□□□□ -1.75
MARK3-223	ENST00000561071	CXCL5	P42830	114 aa		4.11	□□□□□ -1.75
MARK3-223	ENST00000561071	RPL28	P46779	137 aa	Known RBP	4.11	□□□□□ -1.75
MARK3-223	ENST00000561071	NDUFA6	P56556	154 aa		4.11	□□□□□ -1.75
MARK3-223	ENST00000561071	PMVK	Q15126	192 aa		4.11	□□□□□ -1.75
MARK3-223	ENST00000561071	FA2H	Q7L5A8	372 aa		4.11	□□□□□ -1.75
MARK3-223	ENST00000561071	TP73-AS1	Q9UF72	201 aa		4.11	□□□□□ -1.75
MARK3-223	ENST00000561071	IGKV2-28	A0A075B6P5	120 aa		4.1	□□□□□ -1.75
MARK3-223	ENST00000561071	TRAV9-1	A0A075B6T8	112 aa		4.1	□□□□□ -1.75
MARK3-223	ENST00000561071		A0A096LNJ9	63 aa		4.1	□□□□□ -1.75
MARK3-223	ENST00000561071	IGKV2D-28	P01615	120 aa		4.1	□□□□□ -1.75
MARK3-223	ENST00000561071	PMCHL1	Q16048	86 aa		4.1	□□□□□ -1.75
MARK3-223	ENST00000561071	UQCC3	Q6UW78	93 aa		4.1	□□□□□ -1.75
MARK3-223	ENST00000561071	SMCO4	Q9NRQ5	59 aa		4.1	□□□□□ -1.75
MARK3-223	ENST00000561071		A8MU10	97 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	CRYGA	P11844	174 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	UBE2A	P49459	152 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	KRTAP13-2	Q52LG2	175 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	COMMD7	Q86VX2	200 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	KRTAP13-1	Q8IUC0	172 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	NKAPP1	Q8N9T2	125 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071		Q8NDZ9	215 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	ZNF625	Q96I27	306 aa	Predicted RBP	4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	SEC11C	Q9BY50	192 aa		4.09	□□□□□ -1.75
MARK3-223	ENST00000561071	TMEM238	C9JI98	176 aa		4.08	□□□□□ -1.76
MARK3-223	ENST00000561071		H3BRM9	83 aa		4.08	□□□□□ -1.76
MARK3-223	ENST00000561071	ATP5L	O75964	103 aa		4.08	□□□□□ -1.76
MARK3-223	ENST00000561071	IGLC3	P0DOY3	106 aa		4.08	□□□□□ -1.76
MARK3-223	ENST00000561071	ZNF22	P17026	224 aa	Predicted RBP	4.08	□□□□□ -1.76
MARK3-223	ENST00000561071	PRLH	P81277	87 aa		4.08	□□□□□ -1.76
MARK3-223	ENST00000561071	RETNLB	Q9BQ08	111 aa		4.08	□□□□□ -1.76
MARK3-223	ENST00000561071	SND1-IT1	Q9HBX3	110 aa		4.08	□□□□□ -1.76
MARK3-223	ENST00000561071	LINC01549	A6NIU2	74 aa		4.07	□□□□□ -1.76
MARK3-223	ENST00000561071	C11orf86	A6NJI1	115 aa		4.07	□□□□□ -1.76
MARK3-223	ENST00000561071	S100A12	P80511	92 aa		4.07	□□□□□ -1.76
MARK3-223	ENST00000561071	C10orf91	Q5T1B1	145 aa		4.07	□□□□□ -1.76
MARK3-223	ENST00000561071	LCE3E	Q5T5B0	92 aa		4.07	□□□□□ -1.76
MARK3-223	ENST00000561071	C18orf32	Q8TCD1	76 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 127 ms