RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
ACTN1-221ENST00000556571 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
ACTN1-221ENST00000556571 FABP4P15090 132 aa6.92□□□□□ -1.3
ACTN1-221ENST00000556571 IGLV7-46A0A075B6I9 117 aa6.91□□□□□ -1.3
ACTN1-221ENST00000556571 LINC00304Q8N9R0 145 aa6.91□□□□□ -1.3
ACTN1-221ENST00000556571 ANAPC11Q9NYG5 84 aa6.91□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BKO60814 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BJP06899 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BOP23527 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 PLNP26678 52 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BBP33778 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 PFN2P35080 140 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BDP58876 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 LINC00310P59036 64 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BCP62807 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST2H2BEQ16778 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BHQ93079 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BNQ99877 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 HIST1H2BMQ99879 126 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 MAP1LC3CQ9BXW4 147 aa6.9□□□□□ -1.3
ACTN1-221ENST00000556571 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
ACTN1-221ENST00000556571 CTAG1AP78358 180 aa6.89□□□□□ -1.31
ACTN1-221ENST00000556571 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
ACTN1-221ENST00000556571 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
ACTN1-221ENST00000556571 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
ACTN1-221ENST00000556571 COX17Q14061 63 aa6.88□□□□□ -1.31
ACTN1-221ENST00000556571 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
ACTN1-221ENST00000556571 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
ACTN1-221ENST00000556571 ATP6V1G1O75348 118 aa6.87□□□□□ -1.31
ACTN1-221ENST00000556571 DPM2O94777 84 aa6.87□□□□□ -1.31
ACTN1-221ENST00000556571 S100A1P23297 94 aa6.87□□□□□ -1.31
ACTN1-221ENST00000556571 UBE2AP49459 152 aa6.87□□□□□ -1.31
ACTN1-221ENST00000556571 HERVK_113P61574 105 aa6.87□□□□□ -1.31
ACTN1-221ENST00000556571 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
ACTN1-221ENST00000556571 IGKV2D-26A0A0A0MRZ7 120 aa6.86□□□□□ -1.31
ACTN1-221ENST00000556571 LINC00158P58513 81 aa6.86□□□□□ -1.31
ACTN1-221ENST00000556571 KRTAP13-1Q8IUC0 172 aa6.86□□□□□ -1.31
ACTN1-221ENST00000556571 GAGE10A6NGK3 116 aa6.85□□□□□ -1.31
ACTN1-221ENST00000556571 LINC00587B1AMM8 73 aa6.85□□□□□ -1.31
ACTN1-221ENST00000556571 IGKCP01834 107 aa6.85□□□□□ -1.31
ACTN1-221ENST00000556571 PMCHL2Q9BQD1 86 aa6.85□□□□□ -1.31
ACTN1-221ENST00000556571 MYMXA0A1B0GTQ4 84 aa6.84□□□□□ -1.31
ACTN1-221ENST00000556571 HERV-K104P63124 156 aa6.84□□□□□ -1.31
ACTN1-221ENST00000556571 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
ACTN1-221ENST00000556571 PLEKHB2Q96CS7 222 aa6.84□□□□□ -1.31
ACTN1-221ENST00000556571 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
ACTN1-221ENST00000556571 SND1-IT1Q9HBX3 110 aa6.84□□□□□ -1.31
ACTN1-221ENST00000556571 NDUFA12Q9UI09 145 aa6.84□□□□□ -1.31
ACTN1-221ENST00000556571 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
ACTN1-221ENST00000556571 RPL24P83731 157 aaKnown RBP6.83□□□□□ -1.32
ACTN1-221ENST00000556571 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
ACTN1-221ENST00000556571 A0A0U1RRA0 63 aa6.82□□□□□ -1.32
ACTN1-221ENST00000556571 SYS1-DBNDD2H3BUS1 97 aa6.82□□□□□ -1.32
ACTN1-221ENST00000556571 LEPROTO15243 131 aa6.82□□□□□ -1.32
ACTN1-221ENST00000556571 LGALS3P17931 250 aaKnown RBP6.82□□□□□ -1.32
ACTN1-221ENST00000556571 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
ACTN1-221ENST00000556571 J3QQQ9 107 aa6.81□□□□□ -1.32
ACTN1-221ENST00000556571 LINC01547P58512 204 aaPredicted RBP6.81□□□□□ -1.32
ACTN1-221ENST00000556571 SMIM13P0DJ93 91 aa6.8□□□□□ -1.32
ACTN1-221ENST00000556571 NMUP48645 174 aa6.8□□□□□ -1.32
ACTN1-221ENST00000556571 COA6Q5JTJ3 125 aaKnown RBP6.8□□□□□ -1.32
ACTN1-221ENST00000556571 PET117Q6UWS5 81 aa6.8□□□□□ -1.32
ACTN1-221ENST00000556571 IGKV2-28A0A075B6P5 120 aa6.79□□□□□ -1.32
ACTN1-221ENST00000556571 C20orf202A1L168 122 aa6.79□□□□□ -1.32
ACTN1-221ENST00000556571 IGKV2D-28P01615 120 aa6.79□□□□□ -1.32
ACTN1-221ENST00000556571 KRTDAPP60985 99 aa6.79□□□□□ -1.32
ACTN1-221ENST00000556571 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
ACTN1-221ENST00000556571 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
ACTN1-221ENST00000556571 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
ACTN1-221ENST00000556571 VPREB1P12018 145 aa6.78□□□□□ -1.32
ACTN1-221ENST00000556571 PRLHP81277 87 aa6.78□□□□□ -1.32
ACTN1-221ENST00000556571 MIR7-3HGQ8N6C7 128 aa6.78□□□□□ -1.32
ACTN1-221ENST00000556571 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
ACTN1-221ENST00000556571 TSPEAR-AS2P59090 65 aa6.77□□□□□ -1.33
ACTN1-221ENST00000556571 ASB16-AS1Q495Z4 193 aa6.77□□□□□ -1.33
ACTN1-221ENST00000556571 LINC01545Q5VT33 79 aa6.77□□□□□ -1.33
ACTN1-221ENST00000556571 FAM19A1Q7Z5A9 133 aa6.77□□□□□ -1.33
ACTN1-221ENST00000556571 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
ACTN1-221ENST00000556571 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
ACTN1-221ENST00000556571 E9PLD3 99 aa6.76□□□□□ -1.33
ACTN1-221ENST00000556571 C3orf79P0CE67 100 aa6.76□□□□□ -1.33
ACTN1-221ENST00000556571 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
ACTN1-221ENST00000556571 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
ACTN1-221ENST00000556571 M0R378 163 aa6.75□□□□□ -1.33
ACTN1-221ENST00000556571 S100A6P06703 90 aa6.75□□□□□ -1.33
ACTN1-221ENST00000556571 S100A2P29034 98 aa6.75□□□□□ -1.33
ACTN1-221ENST00000556571 AKR1D1P51857 326 aa6.75□□□□□ -1.33
ACTN1-221ENST00000556571 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
ACTN1-221ENST00000556571 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
ACTN1-221ENST00000556571 TMEM238C9JI98 176 aa6.74□□□□□ -1.33
ACTN1-221ENST00000556571 S100A12P80511 92 aa6.74□□□□□ -1.33
ACTN1-221ENST00000556571 NCR3O14931 201 aa6.73□□□□□ -1.33
ACTN1-221ENST00000556571 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
ACTN1-221ENST00000556571 DAND5Q8N907 189 aa6.73□□□□□ -1.33
ACTN1-221ENST00000556571 Q8NDZ9 215 aa6.72□□□□□ -1.33
ACTN1-221ENST00000556571 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
ACTN1-221ENST00000556571 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
ACTN1-221ENST00000556571 ZNF815PA8K554 130 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms