RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 CSPG4Q6UVK1 2322 aa5.81□□□□□ -1.48
LINC00641-201ENST00000555379 PTPN13Q12923 2485 aa5.81□□□□□ -1.48
LINC00641-201ENST00000555379 RTL8CO15255 209 aa5.81□□□□□ -1.48
LINC00641-201ENST00000555379 C1orf64Q8NEQ6 169 aa5.81□□□□□ -1.48
LINC00641-201ENST00000555379 ELOF1P60002 83 aaKnown RBP5.81□□□□□ -1.48
LINC00641-201ENST00000555379 TSPEAR-AS2P59090 65 aa5.8□□□□□ -1.48
LINC00641-201ENST00000555379 SMCR5Q8TEV8 140 aa5.8□□□□□ -1.48
LINC00641-201ENST00000555379 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
LINC00641-201ENST00000555379 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
LINC00641-201ENST00000555379 TM2D3Q9BRN9 247 aa5.79□□□□□ -1.48
LINC00641-201ENST00000555379 A0A096LNJ9 63 aa5.79□□□□□ -1.48
LINC00641-201ENST00000555379 SMIM29Q86T20 159 aa5.79□□□□□ -1.48
LINC00641-201ENST00000555379 ACYP2P14621 99 aa5.79□□□□□ -1.48
LINC00641-201ENST00000555379 LINC00315P59091 139 aa5.78□□□□□ -1.48
LINC00641-201ENST00000555379 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
LINC00641-201ENST00000555379 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
LINC00641-201ENST00000555379 LINC00612Q8N6U2 182 aa5.77□□□□□ -1.49
LINC00641-201ENST00000555379 PCSK5Q92824 1860 aa5.77□□□□□ -1.49
LINC00641-201ENST00000555379 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
LINC00641-201ENST00000555379 PRR14LQ5THK1 2151 aa5.77□□□□□ -1.49
LINC00641-201ENST00000555379 H7BZZ5 65 aa5.77□□□□□ -1.49
LINC00641-201ENST00000555379 Q1T7F1 81 aa5.77□□□□□ -1.49
LINC00641-201ENST00000555379 Q6ZSN1 163 aa5.77□□□□□ -1.49
LINC00641-201ENST00000555379 PLA2G2DQ9UNK4 145 aa5.77□□□□□ -1.49
LINC00641-201ENST00000555379 COL27A1Q8IZC6 1860 aaPredicted RBP5.76□□□□□ -1.49
LINC00641-201ENST00000555379 ADAMTSL4-AS1Q5T5F5 129 aa5.76□□□□□ -1.49
LINC00641-201ENST00000555379 Q5XG85 94 aa5.76□□□□□ -1.49
LINC00641-201ENST00000555379 LINC00588Q9Y4M8 146 aa5.76□□□□□ -1.49
LINC00641-201ENST00000555379 SSBP3-AS1Q7Z2R9 100 aa5.75□□□□□ -1.49
LINC00641-201ENST00000555379 IGF2RP11717 2491 aa5.75□□□□□ -1.49
LINC00641-201ENST00000555379 LINC00167Q96N53 147 aa5.74□□□□□ -1.49
LINC00641-201ENST00000555379 TLX1NBP0CAT3 122 aa5.74□□□□□ -1.49
LINC00641-201ENST00000555379 Q6ZRX8 168 aa5.74□□□□□ -1.49
LINC00641-201ENST00000555379 HIVEP3Q5T1R4 2406 aa5.74□□□□□ -1.49
LINC00641-201ENST00000555379 SORL1Q92673 2214 aa5.74□□□□□ -1.49
LINC00641-201ENST00000555379 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
LINC00641-201ENST00000555379 C6orf48Q9UBA6 75 aa5.73□□□□□ -1.49
LINC00641-201ENST00000555379 A0A087WSZ3 146 aa5.73□□□□□ -1.49
LINC00641-201ENST00000555379 UQCR11O14957 56 aa5.73□□□□□ -1.49
LINC00641-201ENST00000555379 MOBPQ13875 183 aa5.73□□□□□ -1.49
LINC00641-201ENST00000555379 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
LINC00641-201ENST00000555379 GAS8-AS1O95177 125 aa5.72□□□□□ -1.49
LINC00641-201ENST00000555379 K7EIL1 84 aa5.72□□□□□ -1.49
LINC00641-201ENST00000555379 SONP18583 2426 aaKnown RBP5.72□□□□□ -1.49
LINC00641-201ENST00000555379 COA5Q86WW8 74 aa5.72□□□□□ -1.49
LINC00641-201ENST00000555379 CSNK1G2-AS1Q8NCQ2 148 aa5.72□□□□□ -1.49
LINC00641-201ENST00000555379 WNK1Q9H4A3 2382 aa5.71□□□□□ -1.49
LINC00641-201ENST00000555379 J3QL48 77 aa5.71□□□□□ -1.5
LINC00641-201ENST00000555379 Q6ZQT0 140 aa5.71□□□□□ -1.5
LINC00641-201ENST00000555379 PRR34Q9NV39 138 aa5.7□□□□□ -1.5
LINC00641-201ENST00000555379 TLN1Q9Y490 2541 aaKnown RBP5.7□□□□□ -1.5
LINC00641-201ENST00000555379 CCDC168Q8NDH2 2452 aa5.7□□□□□ -1.5
LINC00641-201ENST00000555379 TRBV7-4A0A0J9YYF1 115 aa5.7□□□□□ -1.5
LINC00641-201ENST00000555379 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
LINC00641-201ENST00000555379 PRLHP81277 87 aa5.68□□□□□ -1.5
LINC00641-201ENST00000555379 CNBPP62633 177 aaKnown RBP5.67□□□□□ -1.5
LINC00641-201ENST00000555379 KCNQ1DNQ9H478 68 aa5.67□□□□□ -1.5
LINC00641-201ENST00000555379 LINC00313P59037 77 aa5.65□□□□□ -1.5
LINC00641-201ENST00000555379 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
LINC00641-201ENST00000555379 C9orf163Q8N9P6 203 aa5.65□□□□□ -1.5
LINC00641-201ENST00000555379 ABCA2Q9BZC7 2435 aa5.65□□□□□ -1.5
LINC00641-201ENST00000555379 EPM2AB3EWF7 344 aa5.65□□□□□ -1.5
LINC00641-201ENST00000555379 KRTAP1-3Q8IUG1 177 aa5.65□□□□□ -1.5
LINC00641-201ENST00000555379 IGLV6-57P01721 117 aa5.65□□□□□ -1.51
LINC00641-201ENST00000555379 DOPEY1Q5JWR5 2465 aa5.65□□□□□ -1.51
LINC00641-201ENST00000555379 PLXNB1O43157 2135 aa5.65□□□□□ -1.51
LINC00641-201ENST00000555379 ARHGAP32A7KAX9 2087 aa5.64□□□□□ -1.51
LINC00641-201ENST00000555379 A0A087WTM6 91 aa5.64□□□□□ -1.51
LINC00641-201ENST00000555379 ZNF861PO60384 105 aa5.63□□□□□ -1.51
LINC00641-201ENST00000555379 Q75L30 129 aa5.63□□□□□ -1.51
LINC00641-201ENST00000555379 ZNF575Q86XF7 245 aa5.63□□□□□ -1.51
LINC00641-201ENST00000555379 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
LINC00641-201ENST00000555379 AGRNO00468 2067 aa5.63□□□□□ -1.51
LINC00641-201ENST00000555379 CRIPTQ9P021 101 aa5.63□□□□□ -1.51
LINC00641-201ENST00000555379 APLNQ9ULZ1 77 aa5.63□□□□□ -1.51
LINC00641-201ENST00000555379 FAM218AQ96MZ4 157 aa5.63□□□□□ -1.51
LINC00641-201ENST00000555379 IGLV1-50A0A075B6I6 118 aa5.62□□□□□ -1.51
LINC00641-201ENST00000555379 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
LINC00641-201ENST00000555379 KRTAP10-11P60412 298 aa5.62□□□□□ -1.51
LINC00641-201ENST00000555379 LRRK2Q5S007 2527 aa5.62□□□□□ -1.51
LINC00641-201ENST00000555379 IGLV5-37A0A075B6J1 123 aa5.62□□□□□ -1.51
LINC00641-201ENST00000555379 KRTAP1-1Q07627 177 aa5.62□□□□□ -1.51
LINC00641-201ENST00000555379 SPACA4Q8TDM5 124 aa5.61□□□□□ -1.51
LINC00641-201ENST00000555379 LINC00476Q8WZB0 136 aa5.61□□□□□ -1.51
LINC00641-201ENST00000555379 LINC00304Q8N9R0 145 aa5.61□□□□□ -1.51
LINC00641-201ENST00000555379 LINC01600Q96MT4 127 aa5.61□□□□□ -1.51
LINC00641-201ENST00000555379 PRR3P79522 188 aaKnown RBP5.61□□□□□ -1.51
LINC00641-201ENST00000555379 PHF5AQ7RTV0 110 aaKnown RBP5.61□□□□□ -1.51
LINC00641-201ENST00000555379 SPINK1P00995 79 aa5.6□□□□□ -1.51
LINC00641-201ENST00000555379 A8MWP4 228 aa5.59□□□□□ -1.51
LINC00641-201ENST00000555379 EIF4EBP3O60516 100 aaPredicted RBP5.59□□□□□ -1.51
LINC00641-201ENST00000555379 ASB16-AS1Q495Z4 193 aa5.58□□□□□ -1.52
LINC00641-201ENST00000555379 DEFB116Q30KQ4 102 aa5.58□□□□□ -1.52
LINC00641-201ENST00000555379 ST20-AS1Q8NBB2 130 aa5.57□□□□□ -1.52
LINC00641-201ENST00000555379 MYO18BQ8IUG5 2567 aa5.57□□□□□ -1.52
LINC00641-201ENST00000555379 FAM229BQ4G0N7 80 aa5.57□□□□□ -1.52
LINC00641-201ENST00000555379 PSORS1C2Q9UIG4 136 aa5.56□□□□□ -1.52
LINC00641-201ENST00000555379 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
LINC00641-201ENST00000555379 LINC00528Q8N1L1 170 aa5.56□□□□□ -1.52
LINC00641-201ENST00000555379 DMAC1Q96GE9 116 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms