RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TOMM7Q9P0U1 55 aa4.07□□□□□ -1.76
SCFD1-212ENST00000554486 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
SCFD1-212ENST00000554486 HERVK_113P61574 105 aa4.06□□□□□ -1.76
SCFD1-212ENST00000554486 C2orf82Q6UX34 121 aa4.06□□□□□ -1.76
SCFD1-212ENST00000554486 UNQ6190/PRO20217Q6UXQ8 127 aa4.06□□□□□ -1.76
SCFD1-212ENST00000554486 LINC00336Q6ZUF6 198 aa4.06□□□□□ -1.76
SCFD1-212ENST00000554486 Q8N814 137 aa4.06□□□□□ -1.76
SCFD1-212ENST00000554486 PLEKHB2Q96CS7 222 aa4.06□□□□□ -1.76
SCFD1-212ENST00000554486 DNAH5Q8TE73 4624 aa4.05□□□□□ -1.76
SCFD1-212ENST00000554486 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-212ENST00000554486 J3QQQ9 107 aa4.05□□□□□ -1.76
SCFD1-212ENST00000554486 C6orf226Q5I0X4 101 aa4.05□□□□□ -1.76
SCFD1-212ENST00000554486 Q6ZRU5 148 aa4.05□□□□□ -1.76
SCFD1-212ENST00000554486 ZNF625Q96I27 306 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-212ENST00000554486 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
SCFD1-212ENST00000554486 TTTY13Q9BZ97 58 aa4.05□□□□□ -1.76
SCFD1-212ENST00000554486 A0A1B0GVY2 172 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 HSBP1L1C9JCN9 74 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 F8WDY8 70 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 NDUFA1O15239 70 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 SMIM6P0DI80 62 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 CXCL5P42830 114 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 CNBPP62633 177 aaKnown RBP4.04□□□□□ -1.76
SCFD1-212ENST00000554486 SYCNQ0VAF6 134 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCFD1-212ENST00000554486 CARD19Q96LW7 228 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 CAMK2N2Q96S95 79 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 VAMP8Q9BV40 100 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 C6orf48Q9UBA6 75 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 NDUFA12Q9UI09 145 aa4.04□□□□□ -1.76
SCFD1-212ENST00000554486 DNAH8Q96JB1 4490 aa4.03□□□□□ -1.76
SCFD1-212ENST00000554486 LGALS3P17931 250 aaKnown RBP4.03□□□□□ -1.76
SCFD1-212ENST00000554486 NMUP48645 174 aa4.03□□□□□ -1.76
SCFD1-212ENST00000554486 XGP55808 180 aa4.03□□□□□ -1.76
SCFD1-212ENST00000554486 CKS1BP61024 79 aa4.03□□□□□ -1.76
SCFD1-212ENST00000554486 SPATA45Q537H7 98 aa4.03□□□□□ -1.76
SCFD1-212ENST00000554486 C9orf116Q5BN46 136 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-212ENST00000554486 PCP2Q8IVA1 136 aa4.03□□□□□ -1.76
SCFD1-212ENST00000554486 DYNC1H1Q14204 4646 aaKnown RBP4.02□□□□□ -1.77
SCFD1-212ENST00000554486 TRBV30A0A0K0K1B3 111 aa4.02□□□□□ -1.77
SCFD1-212ENST00000554486 MYMXA0A1B0GTQ4 84 aa4.02□□□□□ -1.77
SCFD1-212ENST00000554486 ZNF815PA8K554 130 aa4.02□□□□□ -1.77
SCFD1-212ENST00000554486 COX8AP10176 69 aa4.02□□□□□ -1.77
SCFD1-212ENST00000554486 LINC01620Q4KN68 170 aa4.02□□□□□ -1.77
SCFD1-212ENST00000554486 C9orf163Q8N9P6 203 aa4.02□□□□□ -1.77
SCFD1-212ENST00000554486 TP73-AS1Q9UF72 201 aa4.02□□□□□ -1.77
SCFD1-212ENST00000554486 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-212ENST00000554486 A0A0J9YXY3 114 aa4.01□□□□□ -1.77
SCFD1-212ENST00000554486 HERV-K104P63124 156 aa4.01□□□□□ -1.77
SCFD1-212ENST00000554486 SFTA2Q6UW10 78 aa4.01□□□□□ -1.77
SCFD1-212ENST00000554486 SDIM1Q6ZPB5 146 aa4.01□□□□□ -1.77
SCFD1-212ENST00000554486 C14orf144Q96I85 54 aa4.01□□□□□ -1.77
SCFD1-212ENST00000554486 ERG28Q9UKR5 140 aa4.01□□□□□ -1.77
SCFD1-212ENST00000554486 LOC107984640A0A0U1RRK4 108 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 KRTAP16-1A8MUX0 517 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 DLEU1O43261 78 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 TLX1NBP0CAT3 122 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 SMIM13P0DJ93 91 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 S100A12P80511 92 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 LCE1FQ5T754 118 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 BOD1L2Q8IYS8 172 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 LINC00518Q8N0U6 118 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 C12orf57Q99622 126 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 LRP1BQ9NZR2 4599 aa4□□□□□ -1.77
SCFD1-212ENST00000554486 A0A0U1RRA0 63 aa3.99□□□□□ -1.77
SCFD1-212ENST00000554486 NDUFC2-KCTD14E9PQ53 114 aa3.99□□□□□ -1.77
SCFD1-212ENST00000554486 TIMM17BO60830 172 aa3.99□□□□□ -1.77
SCFD1-212ENST00000554486 PFN2P35080 140 aa3.99□□□□□ -1.77
SCFD1-212ENST00000554486 KRTAP10-1P60331 282 aa3.99□□□□□ -1.77
SCFD1-212ENST00000554486 MEIG1Q5JSS6 88 aa3.99□□□□□ -1.77
SCFD1-212ENST00000554486 A0A096LNI7 61 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 A4D1N5 150 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 PANO1I0J062 215 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 CHTF8P0CG12 524 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 LINC00158P58513 81 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 RPL18AQ02543 176 aaKnown RBP3.98□□□□□ -1.77
SCFD1-212ENST00000554486 COX17Q14061 63 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 SLC25A34Q6PIV7 304 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 C2orf91Q6ZV80 131 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 MIR7-3HGQ8N6C7 128 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 DAND5Q8N907 189 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 PRO1933Q9H354 126 aa3.98□□□□□ -1.77
SCFD1-212ENST00000554486 IGKV2-24A0A0C4DH68 120 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 C16orf90A8MZG2 172 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 LINC00587B1AMM8 73 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 CIRBPQ14011 172 aaKnown RBP3.97□□□□□ -1.77
SCFD1-212ENST00000554486 C9orf129Q5T035 196 aaKnown RBP3.97□□□□□ -1.77
SCFD1-212ENST00000554486 SOSTDC1Q6X4U4 206 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 Q6ZSA8 131 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 SPANXDQ9BXN6 97 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 SND1-IT1Q9HBX3 110 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 XAGE1AQ9HD64 81 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 SPANXCQ9NY87 97 aa3.97□□□□□ -1.77
SCFD1-212ENST00000554486 Q8NDZ9 215 aa3.96□□□□□ -1.78
SCFD1-212ENST00000554486 SPACA4Q8TDM5 124 aa3.96□□□□□ -1.78
SCFD1-212ENST00000554486 SPANXB1Q9NS25 103 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-212ENST00000554486 HIGD1BQ9P298 99 aa3.96□□□□□ -1.78
SCFD1-212ENST00000554486 UQCR10Q9UDW1 63 aa3.96□□□□□ -1.78
SCFD1-212ENST00000554486 PKIGQ9Y2B9 76 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 524 ms