RNA–Protein interactions for RNA: ENST00000553829.1

LINC01578-201, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 732 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-201ENST00000553829 HIST2H2BEQ16778 126 aa17.47■□□□□ 0.39
LINC01578-201ENST00000553829 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.47■□□□□ 0.39
LINC01578-201ENST00000553829 HIST1H2BHQ93079 126 aa17.47■□□□□ 0.39
LINC01578-201ENST00000553829 HIST1H2BNQ99877 126 aa17.47■□□□□ 0.39
LINC01578-201ENST00000553829 HIST1H2BMQ99879 126 aa17.47■□□□□ 0.39
LINC01578-201ENST00000553829 KRTAP1-4P0C5Y4 121 aa17.45■□□□□ 0.38
LINC01578-201ENST00000553829 HERV-K104P63124 156 aa17.45■□□□□ 0.38
LINC01578-201ENST00000553829 DPM2O94777 84 aa17.44■□□□□ 0.38
LINC01578-201ENST00000553829 A0A0U1RRA0 63 aa17.43■□□□□ 0.38
LINC01578-201ENST00000553829 RPL28P46779 137 aaKnown RBP17.43■□□□□ 0.38
LINC01578-201ENST00000553829 PRR26Q8N8Z3 221 aa17.43■□□□□ 0.38
LINC01578-201ENST00000553829 MAP1LC3CQ9BXW4 147 aa17.43■□□□□ 0.38
LINC01578-201ENST00000553829 NDUFA12Q9UI09 145 aa17.43■□□□□ 0.38
LINC01578-201ENST00000553829 LEPROTO15243 131 aa17.42■□□□□ 0.38
LINC01578-201ENST00000553829 SMIM13P0DJ93 91 aa17.42■□□□□ 0.38
LINC01578-201ENST00000553829 Q8NDZ9 215 aa17.42■□□□□ 0.38
LINC01578-201ENST00000553829 IGLV1-50A0A075B6I6 118 aa17.41■□□□□ 0.38
LINC01578-201ENST00000553829 PMCHL2Q9BQD1 86 aa17.41■□□□□ 0.38
LINC01578-201ENST00000553829 IGKV2-28A0A075B6P5 120 aa17.4■□□□□ 0.38
LINC01578-201ENST00000553829 MYMXA0A1B0GTQ4 84 aa17.4■□□□□ 0.38
LINC01578-201ENST00000553829 LINC00587B1AMM8 73 aa17.4■□□□□ 0.38
LINC01578-201ENST00000553829 IGKV2D-28P01615 120 aa17.4■□□□□ 0.38
LINC01578-201ENST00000553829 IGKCP01834 107 aa17.4■□□□□ 0.38
LINC01578-201ENST00000553829 MEIG1Q5JSS6 88 aa17.4■□□□□ 0.38
LINC01578-201ENST00000553829 PLEKHB2Q96CS7 222 aa17.4■□□□□ 0.38
LINC01578-201ENST00000553829 ATP6V1G1O75348 118 aa17.39■□□□□ 0.37
LINC01578-201ENST00000553829 TSPEAR-AS2P59090 65 aa17.37■□□□□ 0.37
LINC01578-201ENST00000553829 HERVK_113P61574 105 aa17.36■□□□□ 0.37
LINC01578-201ENST00000553829 KRTAP13-1Q8IUC0 172 aa17.35■□□□□ 0.37
LINC01578-201ENST00000553829 MIR7-3HGQ8N6C7 128 aa17.35■□□□□ 0.37
LINC01578-201ENST00000553829 J3QQQ9 107 aa17.34■□□□□ 0.37
LINC01578-201ENST00000553829 SYS1-DBNDD2H3BUS1 97 aa17.32■□□□□ 0.36
LINC01578-201ENST00000553829 UBE2AP49459 152 aa17.32■□□□□ 0.36
LINC01578-201ENST00000553829 TMEM126AQ9H061 195 aa17.31■□□□□ 0.36
LINC01578-201ENST00000553829 M0R378 163 aa17.3■□□□□ 0.36
LINC01578-201ENST00000553829 BOD1L2Q8IYS8 172 aa17.3■□□□□ 0.36
LINC01578-201ENST00000553829 TMEM238C9JI98 176 aa17.29■□□□□ 0.36
LINC01578-201ENST00000553829 RPL13AP40429 203 aaKnown RBP17.29■□□□□ 0.36
LINC01578-201ENST00000553829 NMUP48645 174 aa17.29■□□□□ 0.36
LINC01578-201ENST00000553829 COA6Q5JTJ3 125 aaKnown RBP17.28■□□□□ 0.36
LINC01578-201ENST00000553829 LGALS3P17931 250 aaKnown RBP17.27■□□□□ 0.36
LINC01578-201ENST00000553829 FAM19A1Q7Z5A9 133 aa17.25■□□□□ 0.35
LINC01578-201ENST00000553829 LOC107984156A0A0G2JMH3 177 aa17.24■□□□□ 0.35
LINC01578-201ENST00000553829 E9PLD3 99 aa17.24■□□□□ 0.35
LINC01578-201ENST00000553829 LINC01545Q5VT33 79 aa17.24■□□□□ 0.35
LINC01578-201ENST00000553829 PET117Q6UWS5 81 aa17.24■□□□□ 0.35
LINC01578-201ENST00000553829 ARL17AQ8IVW1 177 aa17.24■□□□□ 0.35
LINC01578-201ENST00000553829 IGKV2D-26A0A0A0MRZ7 120 aa17.23■□□□□ 0.35
LINC01578-201ENST00000553829 PRLHP81277 87 aa17.22■□□□□ 0.35
LINC01578-201ENST00000553829 DAND5Q8N907 189 aa17.21■□□□□ 0.35
LINC01578-201ENST00000553829 UBR4Q5T4S7 5183 aa17.19■□□□□ 0.34
LINC01578-201ENST00000553829 NCR3O14931 201 aa17.18■□□□□ 0.34
LINC01578-201ENST00000553829 C3orf79P0CE67 100 aa17.18■□□□□ 0.34
LINC01578-201ENST00000553829 LRP2P98164 4655 aa17.17■□□□□ 0.34
LINC01578-201ENST00000553829 A0A087X002 238 aa17.17■□□□□ 0.34
LINC01578-201ENST00000553829 CRYGAP11844 174 aa17.17■□□□□ 0.34
LINC01578-201ENST00000553829 A0A0J9YXY3 114 aa17.15■□□□□ 0.34
LINC01578-201ENST00000553829 PRYO14603 147 aa17.15■□□□□ 0.34
LINC01578-201ENST00000553829 KCNQ1DNQ9H478 68 aa17.15■□□□□ 0.34
LINC01578-201ENST00000553829 ANAPC11Q9NYG5 84 aa17.14■□□□□ 0.33
LINC01578-201ENST00000553829 S100A1P23297 94 aa17.13■□□□□ 0.33
LINC01578-201ENST00000553829 FAM229BQ4G0N7 80 aa17.12■□□□□ 0.33
LINC01578-201ENST00000553829 MIEN1Q9BRT3 115 aa17.12■□□□□ 0.33
LINC01578-201ENST00000553829 TRBV10-3A0A0K0K1G6 114 aa17.11■□□□□ 0.33
LINC01578-201ENST00000553829 TRBV10-2A0A0K0K1G8 114 aa17.11■□□□□ 0.33
LINC01578-201ENST00000553829 SPRR1AP35321 89 aa17.11■□□□□ 0.33
LINC01578-201ENST00000553829 KRTDAPP60985 99 aa17.11■□□□□ 0.33
LINC01578-201ENST00000553829 ADAMTSL4-AS1Q5T5F5 129 aa17.11■□□□□ 0.33
LINC01578-201ENST00000553829 LINC00337Q8N6G1 96 aa17.1■□□□□ 0.33
LINC01578-201ENST00000553829 TYMSOSQ8TAI1 123 aa17.09■□□□□ 0.33
LINC01578-201ENST00000553829 NDUFC2O95298 119 aa17.08■□□□□ 0.32
LINC01578-201ENST00000553829 HIGD2AQ9BW72 106 aa17.08■□□□□ 0.32
LINC01578-201ENST00000553829 KRTAP4-16G5E9R7 235 aaPredicted RBP17.07■□□□□ 0.32
LINC01578-201ENST00000553829 S100A12P80511 92 aa17.06■□□□□ 0.32
LINC01578-201ENST00000553829 KRTAP13-2Q52LG2 175 aa17.06■□□□□ 0.32
LINC01578-201ENST00000553829 SOSTDC1Q6X4U4 206 aa17.06■□□□□ 0.32
LINC01578-201ENST00000553829 SPANXB1Q9NS25 103 aaPredicted RBP17.06■□□□□ 0.32
LINC01578-201ENST00000553829 EIF4EBP3O60516 100 aaPredicted RBP17.04■□□□□ 0.32
LINC01578-201ENST00000553829 DDTP30046 118 aa17.04■□□□□ 0.32
LINC01578-201ENST00000553829 ETDCA0A1B0GVM5 59 aa17.02■□□□□ 0.32
LINC01578-201ENST00000553829 TIMM17BO60830 172 aa17.02■□□□□ 0.32
LINC01578-201ENST00000553829 NPC2P61916 151 aa17.02■□□□□ 0.32
LINC01578-201ENST00000553829 LITAFQ99732 161 aa17.02■□□□□ 0.32
LINC01578-201ENST00000553829 C20orf202A1L168 122 aa17.01■□□□□ 0.31
LINC01578-201ENST00000553829 ZNF815PA8K554 130 aa17.01■□□□□ 0.31
LINC01578-201ENST00000553829 IGLV6-57P01721 117 aa16.99■□□□□ 0.31
LINC01578-201ENST00000553829 S100A7L2Q5SY68 101 aa16.98■□□□□ 0.31
LINC01578-201ENST00000553829 SMCR5Q8TEV8 140 aa16.98■□□□□ 0.31
LINC01578-201ENST00000553829 SPRR4Q96PI1 79 aa16.98■□□□□ 0.31
LINC01578-201ENST00000553829 TTTY13Q9BZ97 58 aa16.98■□□□□ 0.31
LINC01578-201ENST00000553829 LPAP08519 4548 aa16.97■□□□□ 0.31
LINC01578-201ENST00000553829 LINC00308Q8TCZ7 52 aa16.97■□□□□ 0.31
LINC01578-201ENST00000553829 B5MCH6 92 aa16.96■□□□□ 0.31
LINC01578-201ENST00000553829 TSPAN13O95857 204 aa16.95■□□□□ 0.3
LINC01578-201ENST00000553829 AKR1D1P51857 326 aa16.95■□□□□ 0.3
LINC01578-201ENST00000553829 ZNF706Q9Y5V0 76 aaPredicted RBP16.95■□□□□ 0.3
LINC01578-201ENST00000553829 ANKRD39Q53RE8 183 aa16.93■□□□□ 0.3
LINC01578-201ENST00000553829 HIST3H2BBQ8N257 126 aa16.92■□□□□ 0.3
LINC01578-201ENST00000553829 SPANXCQ9NY87 97 aa16.92■□□□□ 0.3
LINC01578-201ENST00000553829 ATOH7Q8N100 152 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms