RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 NOP10Q9NPE3 64 aaKnown RBP2.58□□□□□ -2
RAB5B-207ENST00000549915 DMXL2Q8TDJ6 3036 aa2.58□□□□□ -2
RAB5B-207ENST00000549915 CACNA1HO95180 2353 aa2.58□□□□□ -2
RAB5B-207ENST00000549915 ACACAQ13085 2346 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 GVQW2A0A096LPI5 108 aaPredicted RBP2.57□□□□□ -2
RAB5B-207ENST00000549915 IGKV3OR2-268A0A0C4DH90 116 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 A0A0J9YWU9 116 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 C19orf84I3L1E1 186 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 IGHV4-30-4P0DP06 118 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 COX7BP24311 80 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 KIAA0087Q14695 138 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 DEFB136Q30KP8 78 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 WFDC9Q8NEX5 89 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 RMI2Q96E14 147 aa2.57□□□□□ -2
RAB5B-207ENST00000549915 SMG1Q96Q15 3661 aaKnown RBP2.57□□□□□ -2
RAB5B-207ENST00000549915 HRNRQ86YZ3 2850 aaPredicted RBP2.56□□□□□ -2
RAB5B-207ENST00000549915 MED13LQ71F56 2210 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 TRAV10A0A0B4J240 114 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 A0A0U1RQV1 116 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 BPY2O14599 106 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 MT3P25713 68 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 FUSP35637 526 aaKnown RBP eCLIP2.56□□□□□ -2
RAB5B-207ENST00000549915 ESRGQ1W209 222 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 C1orf195Q5TG92 126 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 Q6ZQY7 126 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 C18orf65Q6ZTR6 163 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 ESM1Q9NQ30 184 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 SNURFQ9Y675 71 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 ZNF292O60281 2723 aa2.56□□□□□ -2
RAB5B-207ENST00000549915 EP300Q09472 2414 aaPredicted RBP2.56□□□□□ -2
RAB5B-207ENST00000549915 BSNQ9UPA5 3926 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 TACC2O95359 2948 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 GIG44P09565 113 aaPredicted RBP2.55□□□□□ -2
RAB5B-207ENST00000549915 RPL35AP18077 110 aaKnown RBP2.55□□□□□ -2
RAB5B-207ENST00000549915 NOTCH1P46531 2555 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 ELOF1P60002 83 aaKnown RBP2.55□□□□□ -2
RAB5B-207ENST00000549915 SPAG11BQ08648 103 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 ZNF843Q8N446 348 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 CSNK1G2-AS1Q8NCQ2 148 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 CHCHD10Q8WYQ3 142 aaPredicted RBP2.55□□□□□ -2
RAB5B-207ENST00000549915 DCHS1Q96JQ0 3298 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 TM2D3Q9BRN9 247 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 OCR1Q9BZK8 76 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 PRO0255Q9UI72 69 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 TLN1Q9Y490 2541 aaKnown RBP2.55□□□□□ -2
RAB5B-207ENST00000549915 V9GYY9 64 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 BOD1L1Q8NFC6 3051 aa2.55□□□□□ -2
RAB5B-207ENST00000549915 CCDC168Q8NDH2 2452 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 LCE6AA0A183 80 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 LYRM9A8MSI8 78 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 IGLV1-51P01701 117 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 IGKV4-1P06312 121 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 GNLYP22749 145 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 PRR15Q8IV56 129 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 WFDC11Q8NEX6 87 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 BRK1Q8WUW1 75 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 CELA1Q9UNI1 258 aa2.54□□□□□ -2
RAB5B-207ENST00000549915 PTPRZ1P23471 2315 aaPredicted RBP2.54□□□□□ -2
RAB5B-207ENST00000549915 PTPRQQ9UMZ3 2332 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 DCHS2Q6V1P9 2916 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 M0R2N4 97 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 ZNF73O43830 326 aaPredicted RBP2.53□□□□□ -2
RAB5B-207ENST00000549915 KRTAP10-9P60411 292 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 PRR3P79522 188 aaKnown RBP2.53□□□□□ -2
RAB5B-207ENST00000549915 REG3AQ06141 175 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 Q1T7F1 81 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 LINC00269Q8N2A0 174 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 PKIGQ9Y2B9 76 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 MGAQ8IWI9 3026 aa2.53□□□□□ -2
RAB5B-207ENST00000549915 SPTBN1Q01082 2364 aaKnown RBP2.53□□□□□ -2
RAB5B-207ENST00000549915 LRRK2Q5S007 2527 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 COL6A6A6NMZ7 2263 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 hDV103S1A0JD37 113 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 M0R378 163 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 NDUFB1O75438 58 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 ANGP03950 147 aaKnown RBP2.52□□□□□ -2.01
RAB5B-207ENST00000549915 EGFEM1PQ0D2K5 195 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 HIGD2BQ4VC39 106 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 LELP1Q5T871 98 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 Q6ZRU5 148 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 Q6ZTC4 211 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 Q8NDZ9 215 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 LINC01006Q8NI28 216 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 CYP4F30PQ9H0H9 118 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 PRR34Q9NV39 138 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 LINC00474Q9P2X8 69 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 AKAP13Q12802 2813 aa2.52□□□□□ -2.01
RAB5B-207ENST00000549915 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.52□□□□□ -2.018e-7■□□□□ 10.7
RAB5B-207ENST00000549915 LRBAP50851 2863 aa2.51□□□□□ -2.01
RAB5B-207ENST00000549915 CYSRT1A8MQ03 144 aa2.51□□□□□ -2.01
RAB5B-207ENST00000549915 VPREB1P12018 145 aa2.51□□□□□ -2.01
RAB5B-207ENST00000549915 SEC61GP60059 68 aa2.51□□□□□ -2.01
RAB5B-207ENST00000549915 C9orf116Q5BN46 136 aaPredicted RBP2.51□□□□□ -2.01
RAB5B-207ENST00000549915 CLPSL2Q6UWE3 100 aa2.51□□□□□ -2.01
RAB5B-207ENST00000549915 UNQ6190/PRO20217Q6UXQ8 127 aa2.51□□□□□ -2.01
RAB5B-207ENST00000549915 SCXQ7RTU7 201 aa2.51□□□□□ -2.01
RAB5B-207ENST00000549915 SPTA1P02549 2419 aa2.51□□□□□ -2.01
RAB5B-207ENST00000549915 IGLV5-48A0A075B6I7 105 aa2.5□□□□□ -2.01
RAB5B-207ENST00000549915 ETDCA0A1B0GVM5 59 aa2.5□□□□□ -2.01
RAB5B-207ENST00000549915 DEFB130BP0DP73 79 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms