RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 PKD1L3Q7Z443 1732 aa0.78□□□□□ -2.29
CNOT2-215ENST00000548863 XRN1Q8IZH2 1706 aaKnown RBP0.78□□□□□ -2.29
CNOT2-215ENST00000548863 LINC01549A6NIU2 74 aa0.77□□□□□ -2.29
CNOT2-215ENST00000548863 SSC5DA1L4H1 1573 aa0.77□□□□□ -2.29
CNOT2-215ENST00000548863 ABCA6Q8N139 1617 aa0.77□□□□□ -2.29
CNOT2-215ENST00000548863 RNF17Q9BXT8 1623 aaKnown RBP0.77□□□□□ -2.29
CNOT2-215ENST00000548863 ANKRD36A6QL64 1941 aa0.77□□□□□ -2.29
CNOT2-215ENST00000548863 MYO7AQ13402 2215 aa0.77□□□□□ -2.29
CNOT2-215ENST00000548863 ASCC3Q8N3C0 2202 aaKnown RBP0.77□□□□□ -2.29
CNOT2-215ENST00000548863 CACNA1BQ00975 2339 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 F5P12259 2224 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 WIZO95785 1651 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 ZNF831Q5JPB2 1677 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 NHSQ6T4R5 1651 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 GLI2P10070 1586 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 A0A0D9SFI3 127 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 LCE6AA0A183 80 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 LINC00959A0A1B0GUT2 108 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 COX7BP24311 80 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 FXYD6Q9H0Q3 95 aa0.76□□□□□ -2.29
CNOT2-215ENST00000548863 MAP2P11137 1827 aaKnown RBP0.75□□□□□ -2.29
CNOT2-215ENST00000548863 PAPPA2Q9BXP8 1791 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 TIAM2Q8IVF5 1701 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 KIF1AQ12756 1690 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 ALS2Q96Q42 1657 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 KIAA0556O60303 1618 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 CICQ96RK0 1608 aaPredicted RBP0.75□□□□□ -2.29
CNOT2-215ENST00000548863 CPS1P31327 1500 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 SNRPGP15A8MWD9 76 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 ENHOQ6UWT2 76 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 UBE2DNLQ8IWF7 75 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 UBR3Q6ZT12 1888 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 ITSN2Q9NZM3 1697 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 FBN2P35556 2912 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 NESP48681 1621 aa0.75□□□□□ -2.29
CNOT2-215ENST00000548863 EIF2AK4Q9P2K8 1649 aaKnown RBP0.75□□□□□ -2.29
CNOT2-215ENST00000548863 ERCC6L2Q5T890 1561 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 MAST1Q9Y2H9 1570 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 CLASP1Q7Z460 1538 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 FANCD2Q9BXW9 1451 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 NDUFA4O00483 81 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 FCER1GP30273 86 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 FXYD6P3P58550 94 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 RPL38P63173 70 aaKnown RBP0.74□□□□□ -2.29
CNOT2-215ENST00000548863 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 FMN2Q9NZ56 1722 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 PARP4Q9UKK3 1724 aaKnown RBP0.74□□□□□ -2.29
CNOT2-215ENST00000548863 CFAP43Q8NDM7 1665 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 LAMC1P11047 1609 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 SLIT1O75093 1534 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 SYCP2Q9BX26 1530 aa0.74□□□□□ -2.29
CNOT2-215ENST00000548863 BCORQ6W2J9 1755 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 A0A0G2JMZ2 1700 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 RICTORQ6R327 1708 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 MROH2AA6NES4 1674 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 SPTY2D1-AS1A0A0U1RR47 76 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 ROS1P08922 2347 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 CACNA1CQ13936 2221 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 ASXL3Q9C0F0 2248 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 ABCC6O95255 1503 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 TECTAO75443 2155 aa0.73□□□□□ -2.29
CNOT2-215ENST00000548863 COL14A1Q05707 1796 aaKnown RBP0.73□□□□□ -2.29
CNOT2-215ENST00000548863 CADP27708 2225 aa0.72□□□□□ -2.29
CNOT2-215ENST00000548863 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
CNOT2-215ENST00000548863 K7EIL1 84 aa0.72□□□□□ -2.29
CNOT2-215ENST00000548863 ANKRD17O75179 2603 aaKnown RBP0.72□□□□□ -2.29
CNOT2-215ENST00000548863 POLR1AO95602 1720 aaPredicted RBP0.72□□□□□ -2.29
CNOT2-215ENST00000548863 ZDBF2Q9HCK1 2354 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 TSC2P49815 1807 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 UGGT1Q9NYU2 1555 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 TULP4Q9NRJ4 1543 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 KNTC1P50748 2209 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 CPSF4LA6NMK7 179 aaKnown RBP0.71□□□□□ -2.3
CNOT2-215ENST00000548863 NCBP2-AS2Q69YL0 99 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 LRRC37AA6NMS7 1700 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 NRAPQ86VF7 1730 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 DOT1LQ8TEK3 1739 aa0.71□□□□□ -2.3
CNOT2-215ENST00000548863 AHNAKQ09666 5890 aaKnown RBP0.71□□□□□ -2.3
CNOT2-215ENST00000548863 ZFHX3Q15911 3703 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 CROCC2H7BZ55 1655 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 K7EMI3 77 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 PRH1P02810 166 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 NMES1Q9C002 83 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 TP53AIP1Q9HCN2 124 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 CRIPTQ9P021 101 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 PLXNB2O15031 1838 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 A0A1B0GUL6 1792 aa0.7□□□□□ -2.3
CNOT2-215ENST00000548863 TOP2AP11388 1531 aaKnown RBP0.69□□□□□ -2.3
CNOT2-215ENST00000548863 EFCAB6Q5THR3 1501 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 CNTRLQ7Z7A1 2325 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 ETDCA0A1B0GVM5 59 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 I3L2K1 104 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 I3L3M4 83 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 M0R1W7 72 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 SERF2P84101 59 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 DEFB114Q30KQ6 69 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 PIGYQ3MUY2 71 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 USMG5Q96IX5 58 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 KCNQ1DNQ9H478 68 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 ZNF469Q96JG9 3925 aaPredicted RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms