RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 IGHV3-38A0A0C4DH36 116 aa4.57□□□□□ -1.68
CASC18-202ENST00000548557 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
CASC18-202ENST00000548557 Q6ZTI0 123 aa4.57□□□□□ -1.68
CASC18-202ENST00000548557 NDUFA12Q9UI09 145 aa4.57□□□□□ -1.68
CASC18-202ENST00000548557 MEGF8Q7Z7M0 2845 aa4.57□□□□□ -1.68
CASC18-202ENST00000548557 TRGV2A0A075B6R0 118 aa4.56□□□□□ -1.68
CASC18-202ENST00000548557 ZNF706Q9Y5V0 76 aaPredicted RBP4.56□□□□□ -1.68
CASC18-202ENST00000548557 IGHV3OR16-9A0A0B4J2B5 98 aa4.56□□□□□ -1.68
CASC18-202ENST00000548557 DEFB4AO15263 64 aa4.56□□□□□ -1.68
CASC18-202ENST00000548557 ADAMTSL4-AS1Q5T5F5 129 aa4.56□□□□□ -1.68
CASC18-202ENST00000548557 FAM218AQ96MZ4 157 aa4.56□□□□□ -1.68
CASC18-202ENST00000548557 IGLV5-45A0A087WSX0 123 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 A0A0J9YWU9 116 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 TRBV30A0A0K0K1B3 111 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 H7C2G1 150 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 SLC25A20O43772 301 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 CDK2AP2O75956 126 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 DEFB130BP0DP73 79 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 DEFB130AP0DP74 79 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 REG3AQ06141 175 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 MIAQ16674 131 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 CHCHD10Q8WYQ3 142 aaPredicted RBP4.55□□□□□ -1.68
CASC18-202ENST00000548557 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
CASC18-202ENST00000548557 PRSS2P07478 247 aa4.54□□□□□ -1.68
CASC18-202ENST00000548557 CELA1Q9UNI1 258 aa4.54□□□□□ -1.68
CASC18-202ENST00000548557 ATOX1O00244 68 aa4.54□□□□□ -1.68
CASC18-202ENST00000548557 TIMM17BO60830 172 aa4.54□□□□□ -1.68
CASC18-202ENST00000548557 Q1RN00 199 aa4.54□□□□□ -1.68
CASC18-202ENST00000548557 TRBV10-1A0A0K0K1A3 114 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 NDUFA1O15239 70 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 COX6A2Q02221 97 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 ATXN8Q156A1 80 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 LINC01600Q96MT4 127 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 TRBV6-4A0A1B0GX49 114 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 K7EQD1 137 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 PSPHP1O15172 72 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 RPL36AP83881 106 aaKnown RBP4.53□□□□□ -1.68
CASC18-202ENST00000548557 LINC00242Q5T6M2 205 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 NTM-AS1Q6ZSK4 140 aa4.53□□□□□ -1.68
CASC18-202ENST00000548557 RPL36ALQ969Q0 106 aaKnown RBP4.53□□□□□ -1.68
CASC18-202ENST00000548557 IGHV6-1A0A0B4J1U7 121 aa4.52□□□□□ -1.69
CASC18-202ENST00000548557 TRGV4A0A0C4DH28 118 aa4.52□□□□□ -1.69
CASC18-202ENST00000548557 FHL2Q14192 279 aa4.52□□□□□ -1.69
CASC18-202ENST00000548557 PHF5AQ7RTV0 110 aaKnown RBP4.52□□□□□ -1.69
CASC18-202ENST00000548557 PRO0255Q9UI72 69 aa4.52□□□□□ -1.69
CASC18-202ENST00000548557 LINC00588Q9Y4M8 146 aa4.52□□□□□ -1.69
CASC18-202ENST00000548557 ICOSQ9Y6W8 199 aa4.52□□□□□ -1.69
CASC18-202ENST00000548557 NKAPP1Q8N9T2 125 aa4.52□□□□□ -1.69
CASC18-202ENST00000548557 TENM3Q9P273 2699 aa4.52□□□□□ -1.69
CASC18-202ENST00000548557 TRBV10-2A0A0K0K1G8 114 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 Q6ZTC4 211 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 H3BNG1 76 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 NANOS2P60321 138 aaKnown RBP4.51□□□□□ -1.69
CASC18-202ENST00000548557 UBE2BP63146 152 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 DAND5Q8N907 189 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 CDC42SE2Q9NRR3 84 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 COL7A1Q02388 2944 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 FBN3Q75N90 2809 aa4.51□□□□□ -1.69
CASC18-202ENST00000548557 TRAV10A0A0B4J240 114 aa4.5□□□□□ -1.69
CASC18-202ENST00000548557 COX6CP09669 75 aa4.5□□□□□ -1.69
CASC18-202ENST00000548557 CIRBPQ14011 172 aaKnown RBP4.5□□□□□ -1.69
CASC18-202ENST00000548557 DEFB131BA0A096LNP1 70 aa4.5□□□□□ -1.69
CASC18-202ENST00000548557 LINC00308Q8TCZ7 52 aa4.5□□□□□ -1.69
CASC18-202ENST00000548557 UPK3BQ9BT76 320 aa4.5□□□□□ -1.69
CASC18-202ENST00000548557 TMEM243Q9BU79 118 aa4.5□□□□□ -1.69
CASC18-202ENST00000548557 IGLV9-49A0A0B4J1Y8 123 aa4.49□□□□□ -1.69
CASC18-202ENST00000548557 ZNF625Q96I27 306 aaPredicted RBP4.49□□□□□ -1.69
CASC18-202ENST00000548557 H7C423 109 aa4.49□□□□□ -1.69
CASC18-202ENST00000548557 HTN3P15516 51 aa4.49□□□□□ -1.69
CASC18-202ENST00000548557 CLEC2BQ92478 149 aa4.49□□□□□ -1.69
CASC18-202ENST00000548557 PRKDCP78527 4128 aaKnown RBP4.49□□□□□ -1.69
CASC18-202ENST00000548557 DNAH9Q9NYC9 4486 aa4.49□□□□□ -1.69
CASC18-202ENST00000548557 HUWE1Q7Z6Z7 4374 aaKnown RBP4.49□□□□□ -1.69
CASC18-202ENST00000548557 RBM3P98179 157 aaKnown RBP4.48□□□□□ -1.69
CASC18-202ENST00000548557 C2orf82Q6UX34 121 aa4.48□□□□□ -1.69
CASC18-202ENST00000548557 SOSTDC1Q6X4U4 206 aa4.48□□□□□ -1.69
CASC18-202ENST00000548557 SERP2Q8N6R1 65 aa4.48□□□□□ -1.69
CASC18-202ENST00000548557 TEX49A0A1B0GTD5 131 aa4.48□□□□□ -1.69
CASC18-202ENST00000548557 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
CASC18-202ENST00000548557 LINC01554Q52M75 96 aa4.47□□□□□ -1.69
CASC18-202ENST00000548557 UBE2WQ96B02 151 aa4.47□□□□□ -1.69
CASC18-202ENST00000548557 S100A7L2Q5SY68 101 aa4.47□□□□□ -1.69
CASC18-202ENST00000548557 C7orf65Q6ZTY9 151 aa4.47□□□□□ -1.69
CASC18-202ENST00000548557 NUPR2A6NF83 97 aa4.46□□□□□ -1.69
CASC18-202ENST00000548557 FUSP35637 526 aaKnown RBP eCLIP4.46□□□□□ -1.7
CASC18-202ENST00000548557 KIAA0087Q14695 138 aa4.46□□□□□ -1.7
CASC18-202ENST00000548557 A0A096LPF7 62 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 TRBV6-8A0A0A6YYG3 113 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 C5orf38Q86SI9 138 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 DIRC1Q969H9 104 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 WWC2-AS2Q96NR7 200 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 LINC00474Q9P2X8 69 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 IGLV4-60A0A075B6I1 120 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 CCKP06307 115 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 COX7B2Q8TF08 81 aa4.45□□□□□ -1.7
CASC18-202ENST00000548557 HIST1H4AP62805 103 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms