RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 KRTAP10-4P60372 401 aaPredicted RBP5.9□□□□□ -1.46
GTF2H3-207ENST00000539429 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
GTF2H3-207ENST00000539429 XAGE1AQ9HD64 81 aa5.9□□□□□ -1.46
GTF2H3-207ENST00000539429 HSPB8Q9UJY1 196 aa5.9□□□□□ -1.46
GTF2H3-207ENST00000539429 TRAV12-1A0A0B4J245 112 aa5.89□□□□□ -1.47
GTF2H3-207ENST00000539429 M0QXV9 152 aa5.89□□□□□ -1.47
GTF2H3-207ENST00000539429 PFN2P35080 140 aa5.89□□□□□ -1.47
GTF2H3-207ENST00000539429 C1orf137Q5JT78 98 aa5.89□□□□□ -1.47
GTF2H3-207ENST00000539429 OXTP01178 125 aa5.88□□□□□ -1.47
GTF2H3-207ENST00000539429 HNRNPA3P51991 378 aaKnown RBP5.88□□□□□ -1.47
GTF2H3-207ENST00000539429 C9orf129Q5T035 196 aaKnown RBP5.88□□□□□ -1.47
GTF2H3-207ENST00000539429 ZNF625Q96I27 306 aaPredicted RBP5.88□□□□□ -1.47
GTF2H3-207ENST00000539429 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
GTF2H3-207ENST00000539429 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
GTF2H3-207ENST00000539429 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
GTF2H3-207ENST00000539429 ATP6V1G1O75348 118 aa5.87□□□□□ -1.47
GTF2H3-207ENST00000539429 LBHQ53QV2 105 aaPredicted RBP5.87□□□□□ -1.47
GTF2H3-207ENST00000539429 SFTA2Q6UW10 78 aa5.87□□□□□ -1.47
GTF2H3-207ENST00000539429 MAP1LC3CQ9BXW4 147 aa5.87□□□□□ -1.47
GTF2H3-207ENST00000539429 PSORS1C2Q9UIG4 136 aa5.87□□□□□ -1.47
GTF2H3-207ENST00000539429 NUPR1O60356 82 aa5.86□□□□□ -1.47
GTF2H3-207ENST00000539429 NKAPP1Q8N9T2 125 aa5.86□□□□□ -1.47
GTF2H3-207ENST00000539429 ERG28Q9UKR5 140 aa5.86□□□□□ -1.47
GTF2H3-207ENST00000539429 TMEM223A0PJW6 202 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BKO60814 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 DPM2O94777 84 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BJP06899 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BOP23527 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BBP33778 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 LINC00158P58513 81 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BDP58876 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 SEC61BP60468 96 aaKnown RBP5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HERVK_113P61574 105 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BCP62807 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST2H2BEQ16778 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 MEIG1Q5JSS6 88 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 SPINK6Q6UWN8 80 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BHQ93079 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BNQ99877 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 HIST1H2BMQ99879 126 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 C22orf24Q9Y442 160 aa5.85□□□□□ -1.47
GTF2H3-207ENST00000539429 IGLV5-37A0A075B6J1 123 aa5.84□□□□□ -1.47
GTF2H3-207ENST00000539429 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
GTF2H3-207ENST00000539429 PLNP26678 52 aa5.84□□□□□ -1.47
GTF2H3-207ENST00000539429 COX17Q14061 63 aa5.84□□□□□ -1.47
GTF2H3-207ENST00000539429 IGKCP01834 107 aa5.83□□□□□ -1.48
GTF2H3-207ENST00000539429 S100A1P23297 94 aa5.83□□□□□ -1.48
GTF2H3-207ENST00000539429 MRPL55Q7Z7F7 128 aaKnown RBP5.83□□□□□ -1.48
GTF2H3-207ENST00000539429 PMCHL2Q9BQD1 86 aa5.83□□□□□ -1.48
GTF2H3-207ENST00000539429 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
GTF2H3-207ENST00000539429 RPL24P83731 157 aaKnown RBP5.82□□□□□ -1.48
GTF2H3-207ENST00000539429 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
GTF2H3-207ENST00000539429 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
GTF2H3-207ENST00000539429 MYMXA0A1B0GTQ4 84 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 LINC00587B1AMM8 73 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 LGALS3P17931 250 aaKnown RBP5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 HERV-K104P63124 156 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 KRTAP7-1Q8IUC3 87 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 DIRC1Q969H9 104 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 PLEKHB2Q96CS7 222 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 SND1-IT1Q9HBX3 110 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 TP73-AS1Q9UF72 201 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 NDUFA12Q9UI09 145 aa5.81□□□□□ -1.48
GTF2H3-207ENST00000539429 RPL37AP8A6NKH3 93 aa5.8□□□□□ -1.48
GTF2H3-207ENST00000539429 LEPROTO15243 131 aa5.8□□□□□ -1.48
GTF2H3-207ENST00000539429 SMIM13P0DJ93 91 aa5.8□□□□□ -1.48
GTF2H3-207ENST00000539429 LINC00167Q96N53 147 aa5.8□□□□□ -1.48
GTF2H3-207ENST00000539429 IGKV2D-30A0A075B6S6 120 aa5.79□□□□□ -1.48
GTF2H3-207ENST00000539429 SYS1-DBNDD2H3BUS1 97 aa5.79□□□□□ -1.48
GTF2H3-207ENST00000539429 J3QQQ9 107 aa5.79□□□□□ -1.48
GTF2H3-207ENST00000539429 SRSF9Q13242 221 aaKnown RBP eCLIP5.79□□□□□ -1.48
GTF2H3-207ENST00000539429 KRTAP11-1Q8IUC1 163 aa5.79□□□□□ -1.48
GTF2H3-207ENST00000539429 IGKV2-28A0A075B6P5 120 aa5.78□□□□□ -1.48
GTF2H3-207ENST00000539429 IGKV2D-28P01615 120 aa5.78□□□□□ -1.48
GTF2H3-207ENST00000539429 KRTDAPP60985 99 aa5.78□□□□□ -1.48
GTF2H3-207ENST00000539429 C20orf202A1L168 122 aa5.77□□□□□ -1.49
GTF2H3-207ENST00000539429 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
GTF2H3-207ENST00000539429 MIR7-3HGQ8N6C7 128 aa5.77□□□□□ -1.49
GTF2H3-207ENST00000539429 LINC01600Q96MT4 127 aa5.77□□□□□ -1.49
GTF2H3-207ENST00000539429 MIEN1Q9BRT3 115 aa5.77□□□□□ -1.49
GTF2H3-207ENST00000539429 HERC1Q15751 4861 aa5.77□□□□□ -1.49
GTF2H3-207ENST00000539429 H0Y9J4 135 aa5.76□□□□□ -1.49
GTF2H3-207ENST00000539429 BCE1O60756 84 aa5.76□□□□□ -1.49
GTF2H3-207ENST00000539429 VPREB1P12018 145 aa5.76□□□□□ -1.49
GTF2H3-207ENST00000539429 S100A2P29034 98 aa5.76□□□□□ -1.49
GTF2H3-207ENST00000539429 RPL28P46779 137 aaKnown RBP5.76□□□□□ -1.49
GTF2H3-207ENST00000539429 NMUP48645 174 aa5.76□□□□□ -1.49
GTF2H3-207ENST00000539429 UBE2AP49459 152 aa5.76□□□□□ -1.49
GTF2H3-207ENST00000539429 BOD1L2Q8IYS8 172 aa5.76□□□□□ -1.49
GTF2H3-207ENST00000539429 ZNF861PO60384 105 aa5.75□□□□□ -1.49
GTF2H3-207ENST00000539429 S100A6P06703 90 aa5.75□□□□□ -1.49
GTF2H3-207ENST00000539429 C3orf79P0CE67 100 aa5.75□□□□□ -1.49
GTF2H3-207ENST00000539429 TSPEAR-AS2P59090 65 aa5.75□□□□□ -1.49
GTF2H3-207ENST00000539429 S100A12P80511 92 aa5.75□□□□□ -1.49
GTF2H3-207ENST00000539429 E9PLD3 99 aa5.74□□□□□ -1.49
GTF2H3-207ENST00000539429 M0R378 163 aa5.74□□□□□ -1.49
GTF2H3-207ENST00000539429 COA6Q5JTJ3 125 aaKnown RBP5.74□□□□□ -1.49
GTF2H3-207ENST00000539429 LINC01545Q5VT33 79 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms