RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 LRRC9Q6ZRR7 1453 aa0.56□□□□□ -2.32
SNHG1-210ENST00000539303 TRAV21A0A0B4J279 112 aa0.56□□□□□ -2.32
SNHG1-210ENST00000539303 SPTY2D1-AS1A0A0U1RR47 76 aa0.56□□□□□ -2.32
SNHG1-210ENST00000539303 SPINK1P00995 79 aa0.56□□□□□ -2.32
SNHG1-210ENST00000539303 SPRR1BP22528 89 aa0.56□□□□□ -2.32
SNHG1-210ENST00000539303 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
SNHG1-210ENST00000539303 WFDC9Q8NEX5 89 aa0.56□□□□□ -2.32
SNHG1-210ENST00000539303 CHD9Q3L8U1 2897 aa0.55□□□□□ -2.32
SNHG1-210ENST00000539303 LTN1O94822 1766 aa0.55□□□□□ -2.32
SNHG1-210ENST00000539303 CPSF4LA6NMK7 179 aaKnown RBP0.55□□□□□ -2.32
SNHG1-210ENST00000539303 COX7BP24311 80 aa0.55□□□□□ -2.32
SNHG1-210ENST00000539303 Q5VSD8 79 aa0.55□□□□□ -2.32
SNHG1-210ENST00000539303 FXYD6Q9H0Q3 95 aa0.55□□□□□ -2.32
SNHG1-210ENST00000539303 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
SNHG1-210ENST00000539303 PPRC1Q5VV67 1664 aaKnown RBP0.55□□□□□ -2.32
SNHG1-210ENST00000539303 FRAS1Q86XX4 4008 aa0.55□□□□□ -2.32
SNHG1-210ENST00000539303 TPRP12270 2363 aaKnown RBP0.55□□□□□ -2.32
SNHG1-210ENST00000539303 RRBP1Q9P2E9 1410 aaKnown RBP0.55□□□□□ -2.32
SNHG1-210ENST00000539303 ABCC1P33527 1531 aa0.54□□□□□ -2.32
SNHG1-210ENST00000539303 A0A087WXM4 84 aa0.54□□□□□ -2.32
SNHG1-210ENST00000539303 SPRR1AP35321 89 aa0.54□□□□□ -2.32
SNHG1-210ENST00000539303 DEFB109BQ30KR1 87 aa0.54□□□□□ -2.32
SNHG1-210ENST00000539303 QSER1Q2KHR3 1735 aa0.54□□□□□ -2.32
SNHG1-210ENST00000539303 RGPD8O14715 1765 aaPredicted RBP0.54□□□□□ -2.32
SNHG1-210ENST00000539303 RGPD5Q99666 1765 aa0.54□□□□□ -2.32
SNHG1-210ENST00000539303 PTPRQQ9UMZ3 2332 aa0.54□□□□□ -2.32
SNHG1-210ENST00000539303 URB2Q14146 1524 aaKnown RBP0.54□□□□□ -2.32
SNHG1-210ENST00000539303 NDUFB1O75438 58 aa0.53□□□□□ -2.32
SNHG1-210ENST00000539303 RPL38P63173 70 aaKnown RBP0.53□□□□□ -2.32
SNHG1-210ENST00000539303 DEFB121Q5J5C9 76 aa0.53□□□□□ -2.32
SNHG1-210ENST00000539303 C18orf32Q8TCD1 76 aa0.53□□□□□ -2.32
SNHG1-210ENST00000539303 PIEZO2Q9H5I5 2752 aa0.53□□□□□ -2.32
SNHG1-210ENST00000539303 NKTRP30414 1462 aaKnown RBP0.53□□□□□ -2.33
SNHG1-210ENST00000539303 PIK3C2BO00750 1634 aa0.53□□□□□ -2.33
SNHG1-210ENST00000539303 SMIM13P0DJ93 91 aa0.52□□□□□ -2.33
SNHG1-210ENST00000539303 ATP5EP2Q5VTU8 51 aa0.52□□□□□ -2.33
SNHG1-210ENST00000539303 APLNQ9ULZ1 77 aa0.52□□□□□ -2.33
SNHG1-210ENST00000539303 ANKARQ7Z5J8 1434 aa0.52□□□□□ -2.33
SNHG1-210ENST00000539303 NCOA2Q15596 1464 aa0.52□□□□□ -2.33
SNHG1-210ENST00000539303 CFAP74Q9C0B2 1584 aa0.52□□□□□ -2.33
SNHG1-210ENST00000539303 BCORQ6W2J9 1755 aa0.52□□□□□ -2.33
SNHG1-210ENST00000539303 PTPRZ1P23471 2315 aaPredicted RBP0.52□□□□□ -2.33
SNHG1-210ENST00000539303 POLR1AO95602 1720 aaPredicted RBP0.51□□□□□ -2.33
SNHG1-210ENST00000539303 ZNF831Q5JPB2 1677 aa0.51□□□□□ -2.33
SNHG1-210ENST00000539303 DEFB105AQ8NG35 78 aa0.51□□□□□ -2.33
SNHG1-210ENST00000539303 LRRIQ1Q96JM4 1722 aa0.51□□□□□ -2.33
SNHG1-210ENST00000539303 MRPL34Q9BQ48 92 aaKnown RBP0.51□□□□□ -2.33
SNHG1-210ENST00000539303 PTPN23Q9H3S7 1636 aa0.5□□□□□ -2.33
SNHG1-210ENST00000539303 UMAD1C9J7I0 102 aa0.5□□□□□ -2.33
SNHG1-210ENST00000539303 KLK9Q2XQG4 91 aa0.5□□□□□ -2.33
SNHG1-210ENST00000539303 USP32Q8NFA0 1604 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 MAP3K1Q13233 1512 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 PKDREJQ9NTG1 2253 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 CLIP1P30622 1438 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 CCL22O00626 93 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 SPINK4O60575 86 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 IFI6P09912 130 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 IFI27P40305 119 aaPredicted RBP0.49□□□□□ -2.33
SNHG1-210ENST00000539303 U3KQA8 63 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 PIEZO1Q92508 2521 aa0.49□□□□□ -2.33
SNHG1-210ENST00000539303 SCN11AQ9UI33 1791 aa0.48□□□□□ -2.33
SNHG1-210ENST00000539303 ARFGEF2Q9Y6D5 1785 aa0.48□□□□□ -2.33
SNHG1-210ENST00000539303 TIAM2Q8IVF5 1701 aa0.48□□□□□ -2.33
SNHG1-210ENST00000539303 DOT1LQ8TEK3 1739 aa0.48□□□□□ -2.33
SNHG1-210ENST00000539303 HEPN1Q6WQI6 88 aa0.48□□□□□ -2.33
SNHG1-210ENST00000539303 SMCO4Q9NRQ5 59 aa0.48□□□□□ -2.33
SNHG1-210ENST00000539303 IGF2RP11717 2491 aa0.48□□□□□ -2.33
SNHG1-210ENST00000539303 CEP170BQ9Y4F5 1589 aaPredicted RBP0.48□□□□□ -2.33
SNHG1-210ENST00000539303 MYO5CQ9NQX4 1742 aa0.47□□□□□ -2.33
SNHG1-210ENST00000539303 NREPQ16612 68 aa0.47□□□□□ -2.33
SNHG1-210ENST00000539303 ABCA8O94911 1581 aa0.47□□□□□ -2.33
SNHG1-210ENST00000539303 SPTBN1Q01082 2364 aaKnown RBP0.47□□□□□ -2.33
SNHG1-210ENST00000539303 MUC5BQ9HC84 5762 aaPredicted RBP0.46□□□□□ -2.34
SNHG1-210ENST00000539303 AKAP6Q13023 2319 aa0.46□□□□□ -2.34
SNHG1-210ENST00000539303 PDCD5O14737 125 aa0.46□□□□□ -2.34
SNHG1-210ENST00000539303 DEFA5Q01523 94 aa0.46□□□□□ -2.34
SNHG1-210ENST00000539303 H1FX-AS1Q4G0G2 97 aa0.46□□□□□ -2.34
SNHG1-210ENST00000539303 MAGI3Q5TCQ9 1506 aa0.46□□□□□ -2.34
SNHG1-210ENST00000539303 PREX1Q8TCU6 1659 aa0.46□□□□□ -2.34
SNHG1-210ENST00000539303 USP24Q9UPU5 2620 aa0.46□□□□□ -2.34
SNHG1-210ENST00000539303 OTOGQ6ZRI0 2925 aa0.45□□□□□ -2.34
SNHG1-210ENST00000539303 CFAP43Q8NDM7 1665 aa0.45□□□□□ -2.34
SNHG1-210ENST00000539303 IQGAP3Q86VI3 1631 aa0.45□□□□□ -2.34
SNHG1-210ENST00000539303 TENM3Q9P273 2699 aa0.44□□□□□ -2.34
SNHG1-210ENST00000539303 UGGT2Q9NYU1 1516 aa0.44□□□□□ -2.34
SNHG1-210ENST00000539303 H3BVH4 76 aa0.44□□□□□ -2.34
SNHG1-210ENST00000539303 CDKN2A-AS1Q9UH64 79 aa0.44□□□□□ -2.34
SNHG1-210ENST00000539303 NAV2Q8IVL1 2488 aa0.43□□□□□ -2.34
SNHG1-210ENST00000539303 AHNAKQ09666 5890 aaKnown RBP0.43□□□□□ -2.34
SNHG1-210ENST00000539303 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
SNHG1-210ENST00000539303 LELP1Q5T871 98 aa0.43□□□□□ -2.34
SNHG1-210ENST00000539303 ZFYVE26Q68DK2 2539 aa0.43□□□□□ -2.34
SNHG1-210ENST00000539303 NWD1Q149M9 1564 aa0.43□□□□□ -2.34
SNHG1-210ENST00000539303 GVINP1Q7Z2Y8 2422 aa0.43□□□□□ -2.34
SNHG1-210ENST00000539303 AHNAK2Q8IVF2 5795 aa0.42□□□□□ -2.34
SNHG1-210ENST00000539303 CCDC88BA6NC98 1476 aa0.42□□□□□ -2.34
SNHG1-210ENST00000539303 TNRC6CQ9HCJ0 1690 aaKnown RBP0.42□□□□□ -2.34
SNHG1-210ENST00000539303 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.42□□□□□ -2.343e-19■■■■■ 75.3
SNHG1-210ENST00000539303 NCOR1O75376 2440 aa0.42□□□□□ -2.34
SNHG1-210ENST00000539303 VWFP04275 2813 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 236.2 ms