RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CLPSL2Q6UWE3 100 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 Q6ZR54 194 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 C6orf223Q8N319 242 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 C20orf203Q8NBC4 194 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 UBE2WQ96B02 151 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 LINC01600Q96MT4 127 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 TIMM21Q9BVV7 248 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 SPANXA1Q9NS26 97 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 DNHD1Q96M86 4753 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 IGLV4-3A0A075B6K6 122 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 IGKV2D-24A0A075B6R9 120 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 IGLV9-49A0A0B4J1Y8 123 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 IGKV3OR2-268A0A0C4DH90 116 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 A0A0J9YXY3 114 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 TRBV30A0A0K0K1B3 111 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 TRBV10-2A0A0K0K1G8 114 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 H3BT86 120 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 H7C2G1 150 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 COX6CP09669 75 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 REG3AQ06141 175 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 MIAQ16674 131 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 Q6Q795 121 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 LINC00269Q8N2A0 174 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 SPANXDQ9BXN6 97 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 SPANXCQ9NY87 97 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 PYGO1Q9Y3Y4 419 aa2.88□□□□□ -1.95
SNHG1-208ENST00000538266 CSDC2Q9Y534 153 aaKnown RBP2.88□□□□□ -1.95
SNHG1-208ENST00000538266 IGLV4-60A0A075B6I1 120 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 IGLV10-54A0A075B6I4 117 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 A0A0J9YXV3 536 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 FAM240AA0A1B0GVK7 77 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 TINCRA0A1B0GVN0 87 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 TIMM17BO60830 172 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 IFITM1P13164 125 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 SS18Q15532 418 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 C2orf82Q6UX34 121 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 LINC00336Q6ZUF6 198 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 MUSTN1Q8IVN3 82 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 COPS9Q8WXC6 57 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 PRKDCP78527 4128 aaKnown RBP2.87□□□□□ -1.95
SNHG1-208ENST00000538266 TENM2Q9NT68 2774 aa2.87□□□□□ -1.95
SNHG1-208ENST00000538266 IGHV3-64A0A075B6Q5 118 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 TRAV13-1A0A0B4J241 112 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 IGHV1-58A0A0C4DH39 117 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 XCL1P47992 114 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 NDUFV3P56181 108 aaKnown RBP2.86□□□□□ -1.95
SNHG1-208ENST00000538266 MRPS36P82909 103 aaKnown RBP2.86□□□□□ -1.95
SNHG1-208ENST00000538266 RNASE13Q5GAN3 156 aaKnown RBP2.86□□□□□ -1.95
SNHG1-208ENST00000538266 ENHOQ6UWT2 76 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 LITAFQ99732 161 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 OPRPNQ99935 248 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-208ENST00000538266 CDC42SE2Q9NRR3 84 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 PRR34Q9NV39 138 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 NDUFA12Q9UI09 145 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 DNAH3Q8TD57 4116 aa2.86□□□□□ -1.95
SNHG1-208ENST00000538266 LINC00959A0A1B0GUT2 108 aa2.85□□□□□ -1.95
SNHG1-208ENST00000538266 LST1O00453 97 aa2.85□□□□□ -1.95
SNHG1-208ENST00000538266 NDUFA1O15239 70 aa2.85□□□□□ -1.95
SNHG1-208ENST00000538266 RTL8CO15255 209 aa2.85□□□□□ -1.95
SNHG1-208ENST00000538266 CHCHD10Q8WYQ3 142 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-208ENST00000538266 SS18L2Q9UHA2 77 aa2.85□□□□□ -1.95
SNHG1-208ENST00000538266 CMYA5Q8N3K9 4069 aa2.84□□□□□ -1.95
SNHG1-208ENST00000538266 TRBV7-7A0A0K0K1E9 115 aa2.84□□□□□ -1.95
SNHG1-208ENST00000538266 TEX49A0A1B0GTD5 131 aa2.84□□□□□ -1.95
SNHG1-208ENST00000538266 COX7A2LO14548 114 aa2.84□□□□□ -1.95
SNHG1-208ENST00000538266 LECT2O14960 151 aa2.84□□□□□ -1.95
SNHG1-208ENST00000538266 ACYP1P07311 99 aa2.84□□□□□ -1.95
SNHG1-208ENST00000538266 CIRBPQ14011 172 aaKnown RBP2.84□□□□□ -1.95
SNHG1-208ENST00000538266 C14orf177Q52M58 125 aa2.84□□□□□ -1.95
SNHG1-208ENST00000538266 CD164L2Q6UWJ8 174 aa2.84□□□□□ -1.95
SNHG1-208ENST00000538266 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-208ENST00000538266 A0A087WTM6 91 aa2.83□□□□□ -1.96
SNHG1-208ENST00000538266 HERVK_113P63121 156 aa2.83□□□□□ -1.96
SNHG1-208ENST00000538266 ADAMTSL4-AS1Q5T5F5 129 aa2.83□□□□□ -1.96
SNHG1-208ENST00000538266 CLEC2BQ92478 149 aa2.83□□□□□ -1.96
SNHG1-208ENST00000538266 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-208ENST00000538266 CCDC179H3BU77 68 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 NPC2P61916 151 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 HERV-K104P63124 156 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 LINC00242Q5T6M2 205 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 NOTCH2NLQ7Z3S9 236 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 C5orf38Q86SI9 138 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 Q8N814 137 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 DAND5Q8N907 189 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 FAM104AQ969W3 186 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 PPDPFQ9H3Y8 114 aa2.82□□□□□ -1.96
SNHG1-208ENST00000538266 A0A087WZ39 114 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 GVQW2A0A096LPI5 108 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-208ENST00000538266 IGHV3OR16-9A0A0B4J2B5 98 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 LRCOL1A6NCL2 159 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 TRACP01848 142 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 INAFM2P0DMQ5 153 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 HIGD2BQ4VC39 106 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 MEIG1Q5JSS6 88 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 KRTAP26-1Q6PEX3 210 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 FAM19A3Q7Z5A8 133 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 LINC00643Q86TS7 51 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 LINC00308Q8TCZ7 52 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms