RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CCKP06307 115 aa10.84□□□□□ -0.67
CHMP1A-202ENST00000535997 ENHOQ6UWT2 76 aa10.84□□□□□ -0.67
CHMP1A-202ENST00000535997 LYPD5Q6UWN5 251 aa10.83□□□□□ -0.68
CHMP1A-202ENST00000535997 GVQW2A0A096LPI5 108 aaPredicted RBP10.83□□□□□ -0.68
CHMP1A-202ENST00000535997 Q6JHZ5 121 aa10.83□□□□□ -0.68
CHMP1A-202ENST00000535997 LINC00575Q6W349 94 aa10.82□□□□□ -0.68
CHMP1A-202ENST00000535997 LINC00526Q96FQ7 95 aa10.81□□□□□ -0.68
CHMP1A-202ENST00000535997 HIST1H4AP62805 103 aaKnown RBP10.81□□□□□ -0.68
CHMP1A-202ENST00000535997 IGLV6-57P01721 117 aa10.8□□□□□ -0.68
CHMP1A-202ENST00000535997 HIVEP1P15822 2718 aa10.79□□□□□ -0.68
CHMP1A-202ENST00000535997 H3BNG1 76 aa10.78□□□□□ -0.68
CHMP1A-202ENST00000535997 UQCRQO14949 82 aa10.78□□□□□ -0.68
CHMP1A-202ENST00000535997 C3orf22Q8N5N4 141 aa10.78□□□□□ -0.68
CHMP1A-202ENST00000535997 IGKV3D-7A0A0C4DH55 119 aa10.78□□□□□ -0.68
CHMP1A-202ENST00000535997 hADV29S1A0JD25 119 aa10.78□□□□□ -0.68
CHMP1A-202ENST00000535997 ATOX1O00244 68 aa10.77□□□□□ -0.69
CHMP1A-202ENST00000535997 RPL18AQ02543 176 aaKnown RBP10.77□□□□□ -0.69
CHMP1A-202ENST00000535997 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
CHMP1A-202ENST00000535997 COX7CP15954 63 aa10.74□□□□□ -0.69
CHMP1A-202ENST00000535997 KPRPQ5T749 579 aaPredicted RBP10.74□□□□□ -0.69
CHMP1A-202ENST00000535997 H3BQ85 93 aa10.73□□□□□ -0.69
CHMP1A-202ENST00000535997 ZNF561-AS1K7EIQ3 104 aa10.73□□□□□ -0.69
CHMP1A-202ENST00000535997 RBM3P98179 157 aaKnown RBP10.73□□□□□ -0.69
CHMP1A-202ENST00000535997 C9orf153Q5TBE3 101 aa10.73□□□□□ -0.69
CHMP1A-202ENST00000535997 ATP5EP2Q5VTU8 51 aa10.72□□□□□ -0.69
CHMP1A-202ENST00000535997 WFDC10BQ8IUB3 73 aa10.72□□□□□ -0.69
CHMP1A-202ENST00000535997 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
CHMP1A-202ENST00000535997 TRBV10-3A0A0K0K1G6 114 aa10.71□□□□□ -0.69
CHMP1A-202ENST00000535997 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
CHMP1A-202ENST00000535997 TRAV23DV6A0A075B6W5 121 aa10.7□□□□□ -0.7
CHMP1A-202ENST00000535997 LOC110117498A0A087WWA1 95 aa10.7□□□□□ -0.7
CHMP1A-202ENST00000535997 KRTAP26-1Q6PEX3 210 aa10.7□□□□□ -0.7
CHMP1A-202ENST00000535997 OXLD1Q5BKU9 147 aa10.69□□□□□ -0.7
CHMP1A-202ENST00000535997 CAMK2N2Q96S95 79 aa10.69□□□□□ -0.7
CHMP1A-202ENST00000535997 LAMTOR3Q9UHA4 124 aa10.69□□□□□ -0.7
CHMP1A-202ENST00000535997 EGFEM1PQ0D2K5 195 aa10.69□□□□□ -0.7
CHMP1A-202ENST00000535997 Q6ZQT0 140 aa10.69□□□□□ -0.7
CHMP1A-202ENST00000535997 DIRC1Q969H9 104 aa10.69□□□□□ -0.7
CHMP1A-202ENST00000535997 UBL5Q9BZL1 73 aa10.69□□□□□ -0.7
CHMP1A-202ENST00000535997 A0A087WVE0 104 aa10.68□□□□□ -0.7
CHMP1A-202ENST00000535997 SMIM20Q8N5G0 67 aa10.68□□□□□ -0.7
CHMP1A-202ENST00000535997 Q6ZQY7 126 aa10.68□□□□□ -0.7
CHMP1A-202ENST00000535997 Q6ZTC4 211 aa10.68□□□□□ -0.7
CHMP1A-202ENST00000535997 TRBV7-6A0A0J9YX20 115 aa10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 ZNF73O43830 326 aaPredicted RBP10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 CRYGAP11844 174 aa10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 KRTAP10-11P60412 298 aa10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 C3orf56Q8N813 242 aa10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 GHRHP01286 108 aa10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 PDE6GP18545 87 aa10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 HIGD2BQ4VC39 106 aa10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 RETNQ9HD89 108 aa10.67□□□□□ -0.7
CHMP1A-202ENST00000535997 USP17L23D6RBM5 183 aa10.66□□□□□ -0.7
CHMP1A-202ENST00000535997 ESRGQ1W209 222 aa10.65□□□□□ -0.7
CHMP1A-202ENST00000535997 DSCR8Q96T75 97 aa10.65□□□□□ -0.7
CHMP1A-202ENST00000535997 VPREB1P12018 145 aa10.65□□□□□ -0.7
CHMP1A-202ENST00000535997 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.65□□□□□ -0.7
CHMP1A-202ENST00000535997 SERP2Q8N6R1 65 aa10.65□□□□□ -0.7
CHMP1A-202ENST00000535997 NDUFC2-KCTD14E9PQ53 114 aa10.64□□□□□ -0.71
CHMP1A-202ENST00000535997 COX7BP24311 80 aa10.64□□□□□ -0.71
CHMP1A-202ENST00000535997 M0R378 163 aa10.64□□□□□ -0.71
CHMP1A-202ENST00000535997 ELOF1P60002 83 aaKnown RBP10.64□□□□□ -0.71
CHMP1A-202ENST00000535997 Q6ZRU5 148 aa10.64□□□□□ -0.71
CHMP1A-202ENST00000535997 C15orf56Q8N910 161 aa10.64□□□□□ -0.71
CHMP1A-202ENST00000535997 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
CHMP1A-202ENST00000535997 F8WDY8 70 aa10.63□□□□□ -0.71
CHMP1A-202ENST00000535997 C1orf43Q9BWL3 253 aa10.63□□□□□ -0.71
CHMP1A-202ENST00000535997 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
CHMP1A-202ENST00000535997 ANK2Q01484 3957 aa10.61□□□□□ -0.71
CHMP1A-202ENST00000535997 DEFB131BA0A096LNP1 70 aa10.59□□□□□ -0.71
CHMP1A-202ENST00000535997 FAM19A1Q7Z5A9 133 aa10.59□□□□□ -0.71
CHMP1A-202ENST00000535997 C11orf45Q8TAV5 145 aa10.58□□□□□ -0.72
CHMP1A-202ENST00000535997 IGKV2D-24A0A075B6R9 120 aa10.57□□□□□ -0.72
CHMP1A-202ENST00000535997 TRBV7-4A0A0J9YYF1 115 aa10.57□□□□□ -0.72
CHMP1A-202ENST00000535997 Q6ZRP5 223 aa10.57□□□□□ -0.72
CHMP1A-202ENST00000535997 M0R2N4 97 aa10.56□□□□□ -0.72
CHMP1A-202ENST00000535997 UPK3BQ9BT76 320 aa10.56□□□□□ -0.72
CHMP1A-202ENST00000535997 LINC00528Q8N1L1 170 aa10.56□□□□□ -0.72
CHMP1A-202ENST00000535997 SYCNQ0VAF6 134 aa10.55□□□□□ -0.72
CHMP1A-202ENST00000535997 Q6ZVQ6 151 aa10.55□□□□□ -0.72
CHMP1A-202ENST00000535997 LINC01547P58512 204 aaPredicted RBP10.55□□□□□ -0.72
CHMP1A-202ENST00000535997 TENM3Q9P273 2699 aa10.54□□□□□ -0.72
CHMP1A-202ENST00000535997 DNAH10OSP0CZ25 163 aa10.53□□□□□ -0.72
CHMP1A-202ENST00000535997 F8P00451 2351 aa10.53□□□□□ -0.72
CHMP1A-202ENST00000535997 CXCL6P80162 114 aa10.53□□□□□ -0.72
CHMP1A-202ENST00000535997 HAMPP81172 84 aa10.53□□□□□ -0.72
CHMP1A-202ENST00000535997 BCE1O60756 84 aa10.51□□□□□ -0.73
CHMP1A-202ENST00000535997 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
CHMP1A-202ENST00000535997 CMYA5Q8N3K9 4069 aa10.51□□□□□ -0.73
CHMP1A-202ENST00000535997 CYSTM1Q9H1C7 97 aa10.5□□□□□ -0.73
CHMP1A-202ENST00000535997 KCNQ1DNQ9H478 68 aa10.5□□□□□ -0.73
CHMP1A-202ENST00000535997 STAB1Q9NY15 2570 aa10.5□□□□□ -0.73
CHMP1A-202ENST00000535997 TLX1NBP0CAT3 122 aa10.48□□□□□ -0.73
CHMP1A-202ENST00000535997 TMEM258P61165 79 aa10.48□□□□□ -0.73
CHMP1A-202ENST00000535997 NKAPP1Q8N9T2 125 aa10.48□□□□□ -0.73
CHMP1A-202ENST00000535997 RPS28P62857 69 aaKnown RBP10.46□□□□□ -0.73
CHMP1A-202ENST00000535997 PLA2G2DQ9UNK4 145 aa10.46□□□□□ -0.74
CHMP1A-202ENST00000535997 FBN1P35555 2871 aaKnown RBP10.45□□□□□ -0.74
CHMP1A-202ENST00000535997 DNAH3Q8TD57 4116 aa10.45□□□□□ -0.74
CHMP1A-202ENST00000535997 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms