RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
PTPRK-219ENST00000531050 ABCA2Q9BZC7 2435 aa5.23□□□□□ -1.57
PTPRK-219ENST00000531050 C2CD3Q4AC94 2353 aa5.23□□□□□ -1.57
PTPRK-219ENST00000531050 EPG5Q9HCE0 2579 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 DEFB114Q30KQ6 69 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 Q75L30 129 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 KLK12Q9UKR0 248 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 IGHV4-30-2A0A087WSY4 118 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 TRGV1A0A0A0MS02 117 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 DEFB131AP59861 70 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 BRD3OSQ6XYD6 125 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 ST20-AS1Q8NBB2 130 aa5.22□□□□□ -1.57
PTPRK-219ENST00000531050 COL12A1Q99715 3063 aa5.21□□□□□ -1.57
PTPRK-219ENST00000531050 LINC00959A0A1B0GUT2 108 aa5.21□□□□□ -1.58
PTPRK-219ENST00000531050 IGLV6-57P01721 117 aa5.21□□□□□ -1.58
PTPRK-219ENST00000531050 IGHV4-30-4P0DP06 118 aa5.21□□□□□ -1.58
PTPRK-219ENST00000531050 TRGV4A0A0C4DH28 118 aa5.21□□□□□ -1.58
PTPRK-219ENST00000531050 IGHV4-61A0A0C4DH41 118 aa5.21□□□□□ -1.58
PTPRK-219ENST00000531050 COX17Q14061 63 aa5.21□□□□□ -1.58
PTPRK-219ENST00000531050 C9orf116Q5BN46 136 aaPredicted RBP5.21□□□□□ -1.58
PTPRK-219ENST00000531050 LOC100131303A0A0U1RQF7 123 aa5.2□□□□□ -1.58
PTPRK-219ENST00000531050 ETDCA0A1B0GVM5 59 aa5.2□□□□□ -1.58
PTPRK-219ENST00000531050 A6NED7 52 aa5.2□□□□□ -1.58
PTPRK-219ENST00000531050 MOBPQ13875 183 aa5.2□□□□□ -1.58
PTPRK-219ENST00000531050 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
PTPRK-219ENST00000531050 OXLD1Q5BKU9 147 aa5.2□□□□□ -1.58
PTPRK-219ENST00000531050 B9D2Q9BPU9 175 aa5.2□□□□□ -1.58
PTPRK-219ENST00000531050 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
PTPRK-219ENST00000531050 LY6EQ16553 131 aa5.19□□□□□ -1.58
PTPRK-219ENST00000531050 LOC101927531A0A1B0GV80 90 aa5.19□□□□□ -1.58
PTPRK-219ENST00000531050 C3orf84H3BNL1 204 aa5.19□□□□□ -1.58
PTPRK-219ENST00000531050 A6NDX4 124 aa5.18□□□□□ -1.58
PTPRK-219ENST00000531050 INSP01308 110 aa5.18□□□□□ -1.58
PTPRK-219ENST00000531050 ELOF1P60002 83 aaKnown RBP5.18□□□□□ -1.58
PTPRK-219ENST00000531050 CCL19Q99731 98 aa5.18□□□□□ -1.58
PTPRK-219ENST00000531050 ZFYVE26Q68DK2 2539 aa5.18□□□□□ -1.58
PTPRK-219ENST00000531050 H3BUX3 64 aa5.18□□□□□ -1.58
PTPRK-219ENST00000531050 WNK1Q9H4A3 2382 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 CR1P17927 2039 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 IGHV4-28A0A0C4DH34 117 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 HIGD2BQ4VC39 106 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 PRR26Q8N8Z3 221 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 LINC00208Q96KT6 92 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 IGSF10Q6WRI0 2623 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 NDUFB1O75438 58 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 NKAPP1Q8N9T2 125 aa5.17□□□□□ -1.58
PTPRK-219ENST00000531050 CREBBPQ92793 2442 aa5.16□□□□□ -1.58
PTPRK-219ENST00000531050 CCL24O00175 119 aa5.16□□□□□ -1.58
PTPRK-219ENST00000531050 IGHV4-59P01825 116 aa5.16□□□□□ -1.58
PTPRK-219ENST00000531050 C10orf99Q6UWK7 81 aa5.16□□□□□ -1.58
PTPRK-219ENST00000531050 Q9BRP9 147 aa5.16□□□□□ -1.58
PTPRK-219ENST00000531050 MSMBP08118 114 aa5.15□□□□□ -1.58
PTPRK-219ENST00000531050 KMT2BQ9UMN6 2715 aaPredicted RBP5.15□□□□□ -1.58
PTPRK-219ENST00000531050 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.14□□□□□ -1.596e-9■■■□□ 16.5
PTPRK-219ENST00000531050 CHD6Q8TD26 2715 aa5.14□□□□□ -1.59
PTPRK-219ENST00000531050 CELSR1Q9NYQ6 3014 aa5.14□□□□□ -1.59
PTPRK-219ENST00000531050 CLPSL2Q6UWE3 100 aa5.14□□□□□ -1.59
PTPRK-219ENST00000531050 MAP6D1Q9H9H5 199 aa5.14□□□□□ -1.59
PTPRK-219ENST00000531050 DSCR10P59022 87 aa5.13□□□□□ -1.59
PTPRK-219ENST00000531050 SPANXA2-OT1Q8N9U9 137 aa5.13□□□□□ -1.59
PTPRK-219ENST00000531050 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
PTPRK-219ENST00000531050 MAP1AP78559 2803 aaPredicted RBP5.13□□□□□ -1.59
PTPRK-219ENST00000531050 CFAP46Q8IYW2 2715 aa5.13□□□□□ -1.59
PTPRK-219ENST00000531050 LINC00313P59037 77 aa5.13□□□□□ -1.59
PTPRK-219ENST00000531050 SPTAN1Q13813 2472 aaKnown RBP5.12□□□□□ -1.59
PTPRK-219ENST00000531050 B4DSR2 109 aa5.12□□□□□ -1.59
PTPRK-219ENST00000531050 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
PTPRK-219ENST00000531050 NOP10Q9NPE3 64 aaKnown RBP5.12□□□□□ -1.59
PTPRK-219ENST00000531050 MDFIQ99750 246 aa5.12□□□□□ -1.59
PTPRK-219ENST00000531050 K7EQZ3 153 aa5.11□□□□□ -1.59
PTPRK-219ENST00000531050 VPREB1P12018 145 aa5.11□□□□□ -1.59
PTPRK-219ENST00000531050 DSCR9P59020 149 aa5.11□□□□□ -1.59
PTPRK-219ENST00000531050 LINC01554Q52M75 96 aa5.11□□□□□ -1.59
PTPRK-219ENST00000531050 FAM208BQ5VWN6 2430 aa5.11□□□□□ -1.59
PTPRK-219ENST00000531050 DEFB112Q30KQ8 113 aa5.11□□□□□ -1.59
PTPRK-219ENST00000531050 UNQ6190/PRO20217Q6UXQ8 127 aa5.11□□□□□ -1.59
PTPRK-219ENST00000531050 VPS13CQ709C8 3753 aa5.1□□□□□ -1.59
PTPRK-219ENST00000531050 LINC00528Q8N1L1 170 aa5.09□□□□□ -1.59
PTPRK-219ENST00000531050 PLAC8Q9NZF1 115 aa5.09□□□□□ -1.59
PTPRK-219ENST00000531050 A0A1W2PNM2 257 aa5.09□□□□□ -1.59
PTPRK-219ENST00000531050 ODF3L2Q3SX64 289 aa5.09□□□□□ -1.59
PTPRK-219ENST00000531050 A0A1B0GUV1 79 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 MP68P56378 58 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 KPRPQ5T749 579 aaPredicted RBP5.08□□□□□ -1.6
PTPRK-219ENST00000531050 WFDC10AQ9H1F0 79 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 DOPEY1Q5JWR5 2465 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 IGLV5-48A0A075B6I7 105 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 NBPF19A0A087WUL8 3843 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 SPINK7P58062 85 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 COA5Q86WW8 74 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 ZNF462Q96JM2 2506 aa5.08□□□□□ -1.6
PTPRK-219ENST00000531050 A0A0J9YWU9 116 aa5.07□□□□□ -1.6
PTPRK-219ENST00000531050 SLURP1P55000 103 aa5.07□□□□□ -1.6
PTPRK-219ENST00000531050 ADM2Q7Z4H4 148 aa5.07□□□□□ -1.6
PTPRK-219ENST00000531050 CHCHD10Q8WYQ3 142 aaPredicted RBP5.07□□□□□ -1.6
PTPRK-219ENST00000531050 NOTCH3Q9UM47 2321 aa5.07□□□□□ -1.6
PTPRK-219ENST00000531050 A0A1B0GW54 56 aa5.07□□□□□ -1.6
PTPRK-219ENST00000531050 KHDC1LQ5JSQ8 128 aa5.07□□□□□ -1.6
PTPRK-219ENST00000531050 LINC01558Q9Y6Z2 57 aa5.07□□□□□ -1.6
PTPRK-219ENST00000531050 IGLV10-54A0A075B6I4 117 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms