RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 CCL18P55774 89 aa1.98□□□□□ -2.09
SOX6-212ENST00000529469 CNBPP62633 177 aaKnown RBP1.98□□□□□ -2.09
SOX6-212ENST00000529469 PDE6HQ13956 83 aa1.98□□□□□ -2.09
SOX6-212ENST00000529469 DEFB106AQ8N104 65 aa1.98□□□□□ -2.09
SOX6-212ENST00000529469 FREM1Q5H8C1 2179 aa1.98□□□□□ -2.09
SOX6-212ENST00000529469 CR1P17927 2039 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 IGKV3-7A0A075B6H7 116 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 IGHV3-64A0A075B6Q5 118 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 UQCR11O14957 56 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 PRB3Q04118 309 aaPredicted RBP1.97□□□□□ -2.09
SOX6-212ENST00000529469 Q6ZTI0 123 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 COA5Q86WW8 74 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 LINC00308Q8TCZ7 52 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 MALRD1Q5VYJ5 2156 aa1.97□□□□□ -2.09
SOX6-212ENST00000529469 TRGV4A0A0C4DH28 118 aa1.96□□□□□ -2.1
SOX6-212ENST00000529469 ETDCA0A1B0GVM5 59 aa1.96□□□□□ -2.1
SOX6-212ENST00000529469 A0A1W2PNN7 141 aa1.96□□□□□ -2.1
SOX6-212ENST00000529469 IGKV2-29A2NJV5 120 aaPredicted RBP1.96□□□□□ -2.1
SOX6-212ENST00000529469 CCL3L1P16619 93 aa1.96□□□□□ -2.1
SOX6-212ENST00000529469 R4GN34 69 aa1.96□□□□□ -2.1
SOX6-212ENST00000529469 TRGV2A0A075B6R0 118 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 FREM3P0C091 2139 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 HRES1P13985 223 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 PIGYQ3MUY2 71 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 KRTAP26-1Q6PEX3 210 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 CNFNQ9BYD5 112 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 MED12Q93074 2177 aa1.95□□□□□ -2.1
SOX6-212ENST00000529469 SSC5DA1L4H1 1573 aa1.94□□□□□ -2.1
SOX6-212ENST00000529469 KIAA0100Q14667 2235 aaKnown RBP1.94□□□□□ -2.1
SOX6-212ENST00000529469 TNRC6CQ9HCJ0 1690 aaKnown RBP1.94□□□□□ -2.1
SOX6-212ENST00000529469 IGKV3OR2-268A0A0C4DH90 116 aa1.94□□□□□ -2.1
SOX6-212ENST00000529469 A0A1B0GU33 70 aa1.94□□□□□ -2.1
SOX6-212ENST00000529469 LINC00959A0A1B0GUT2 108 aa1.94□□□□□ -2.1
SOX6-212ENST00000529469 NDUFA1O15239 70 aa1.94□□□□□ -2.1
SOX6-212ENST00000529469 CRIP1P50238 77 aa1.94□□□□□ -2.1
SOX6-212ENST00000529469 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.93□□□□□ -2.1
SOX6-212ENST00000529469 DEFB114Q30KQ6 69 aa1.93□□□□□ -2.1
SOX6-212ENST00000529469 C9orf163Q8N9P6 203 aa1.93□□□□□ -2.1
SOX6-212ENST00000529469 SMIM11BQ8TCY0 68 aa1.93□□□□□ -2.1
SOX6-212ENST00000529469 SPRR4Q96PI1 79 aa1.93□□□□□ -2.1
SOX6-212ENST00000529469 TRBV6-4A0A1B0GX49 114 aa1.92□□□□□ -2.1
SOX6-212ENST00000529469 TRIOBPQ9H2D6 2365 aa1.91□□□□□ -2.1
SOX6-212ENST00000529469 ALPK2Q86TB3 2170 aa1.91□□□□□ -2.1
SOX6-212ENST00000529469 A0A1B0GU69 56 aa1.91□□□□□ -2.1
SOX6-212ENST00000529469 COX7BP24311 80 aa1.91□□□□□ -2.1
SOX6-212ENST00000529469 DEFB134Q4QY38 66 aa1.91□□□□□ -2.1
SOX6-212ENST00000529469 KCNQ1DNQ9H478 68 aa1.91□□□□□ -2.1
SOX6-212ENST00000529469 SDK1Q7Z5N4 2213 aa1.9□□□□□ -2.1
SOX6-212ENST00000529469 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
SOX6-212ENST00000529469 IGLV3-1P01715 115 aa1.9□□□□□ -2.11
SOX6-212ENST00000529469 IGLV6-57P01721 117 aa1.9□□□□□ -2.11
SOX6-212ENST00000529469 LINC00158P58513 81 aa1.9□□□□□ -2.11
SOX6-212ENST00000529469 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
SOX6-212ENST00000529469 RPL39P62891 51 aaKnown RBP1.9□□□□□ -2.11
SOX6-212ENST00000529469 RPL39LQ96EH5 51 aaKnown RBP1.9□□□□□ -2.11
SOX6-212ENST00000529469 TNCP24821 2201 aa1.9□□□□□ -2.11
SOX6-212ENST00000529469 A0A087WTM6 91 aa1.89□□□□□ -2.11
SOX6-212ENST00000529469 TRGV1A0A0A0MS02 117 aa1.89□□□□□ -2.11
SOX6-212ENST00000529469 M0R2N4 97 aa1.89□□□□□ -2.11
SOX6-212ENST00000529469 Q6ZQY7 126 aa1.89□□□□□ -2.11
SOX6-212ENST00000529469 LEAP2Q969E1 77 aa1.89□□□□□ -2.11
SOX6-212ENST00000529469 CUL9Q8IWT3 2517 aa1.89□□□□□ -2.11
SOX6-212ENST00000529469 PRCDQ00LT1 54 aa1.88□□□□□ -2.11
SOX6-212ENST00000529469 COX17Q14061 63 aa1.88□□□□□ -2.11
SOX6-212ENST00000529469 PATE1Q8WXA2 126 aa1.88□□□□□ -2.11
SOX6-212ENST00000529469 LINC00472Q9H8W2 130 aa1.88□□□□□ -2.11
SOX6-212ENST00000529469 PRRC2BQ5JSZ5 2229 aaKnown RBP1.87□□□□□ -2.11
SOX6-212ENST00000529469 RPL37AP61513 92 aaKnown RBP1.87□□□□□ -2.11
SOX6-212ENST00000529469 SPAG17Q6Q759 2223 aa1.87□□□□□ -2.11
SOX6-212ENST00000529469 ABCA4P78363 2273 aa1.86□□□□□ -2.11
SOX6-212ENST00000529469 IGKV2-40A0A087WW87 121 aaPredicted RBP1.86□□□□□ -2.11
SOX6-212ENST00000529469 NBDYA0A0U1RRE5 68 aa1.86□□□□□ -2.11
SOX6-212ENST00000529469 IGKV2D-40P01614 121 aaPredicted RBP1.86□□□□□ -2.11
SOX6-212ENST00000529469 ACYP2P14621 99 aa1.86□□□□□ -2.11
SOX6-212ENST00000529469 POLR2KP53803 58 aaKnown RBP1.86□□□□□ -2.11
SOX6-212ENST00000529469 C4orf3Q8WVX3 66 aa1.86□□□□□ -2.11
SOX6-212ENST00000529469 Q96NJ1 140 aa1.86□□□□□ -2.11
SOX6-212ENST00000529469 BPTFQ12830 3046 aa1.86□□□□□ -2.11
SOX6-212ENST00000529469 MRPL33O75394 65 aaKnown RBP1.85□□□□□ -2.11
SOX6-212ENST00000529469 SSBP3-AS1Q7Z2R9 100 aa1.85□□□□□ -2.11
SOX6-212ENST00000529469 CDKN2A-AS1Q9UH64 79 aa1.85□□□□□ -2.11
SOX6-212ENST00000529469 RP1P56715 2156 aa1.85□□□□□ -2.11
SOX6-212ENST00000529469 H3BRN7 92 aa1.84□□□□□ -2.11
SOX6-212ENST00000529469 LINC00575Q6W349 94 aa1.84□□□□□ -2.11
SOX6-212ENST00000529469 C5orf56Q8N8D9 126 aa1.84□□□□□ -2.11
SOX6-212ENST00000529469 UNC13CQ8NB66 2214 aa1.84□□□□□ -2.11
SOX6-212ENST00000529469 DEFB131BA0A096LNP1 70 aa1.83□□□□□ -2.12
SOX6-212ENST00000529469 Q8IZM0 81 aa1.83□□□□□ -2.12
SOX6-212ENST00000529469 PRO3102Q9H379 93 aa1.83□□□□□ -2.12
SOX6-212ENST00000529469 COL4A5P29400 1685 aa1.83□□□□□ -2.12
SOX6-212ENST00000529469 KNTC1P50748 2209 aa1.82□□□□□ -2.12
SOX6-212ENST00000529469 CACNA1CQ13936 2221 aa1.82□□□□□ -2.12
SOX6-212ENST00000529469 STATHP02808 62 aa1.82□□□□□ -2.12
SOX6-212ENST00000529469 DEFB104AQ8WTQ1 72 aa1.82□□□□□ -2.12
SOX6-212ENST00000529469 CCL19Q99731 98 aa1.82□□□□□ -2.12
SOX6-212ENST00000529469 PRO2289Q9P1D8 64 aa1.82□□□□□ -2.12
SOX6-212ENST00000529469 MED13LQ71F56 2210 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms