RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 KRTAP13-3Q3SY46 172 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 CLPSL2Q6UWE3 100 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 Q6ZUT4 128 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 HIST3H2BBQ8N257 126 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 RMI2Q96E14 147 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 CSMD3Q7Z407 3707 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 TRAV12-1A0A0B4J245 112 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 FAM168BA1KXE4 195 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 PSCAO43653 123 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 NDUFS5O43920 106 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 UBE2D1P51668 147 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 KRTDAPP60985 99 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 PRR3P79522 188 aaKnown RBP2.91□□□□□ -1.94
USP48-211ENST00000526044 COX6A2Q02221 97 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 C1orf134Q5TEV5 83 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 OR13C6PQ8NH95 151 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 HIST1H4GQ99525 98 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 HIST1H2BLQ99880 126 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 DNAH1Q9P2D7 4330 aa2.91□□□□□ -1.94
USP48-211ENST00000526044 A0A0J9YXV3 536 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 FAM236DA0A1B0GTK5 79 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 SYS1-DBNDD2H3BUS1 97 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 C3orf79P0CE67 100 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 FAM236CP0DP71 79 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 XCL1P47992 114 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 HERVK_113P63121 156 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 FAM19A3Q7Z5A8 133 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 SPATA12Q7Z6I5 190 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 C5orf38Q86SI9 138 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 C12orf57Q99622 126 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 RBM12B-AS1Q9P1G2 102 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 HYDINQ4G0P3 5121 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 STAB2Q8WWQ8 2551 aa2.9□□□□□ -1.95
USP48-211ENST00000526044 IGHV3OR16-9A0A0B4J2B5 98 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 A0A0U1RQV1 116 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 F8VRH5 84 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 H3BRM9 83 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 COX7A2LO14548 114 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 APOMO95445 188 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 IGLC3P0DOY3 106 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 AKR1D1P51857 326 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 KIAA0087Q14695 138 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 KRTAP26-1Q6PEX3 210 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 OR10D4PQ8NGN7 298 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 PMCHL2Q9BQD1 86 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 TENM2Q9NT68 2774 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 MRPL35Q9NZE8 188 aaKnown RBP2.89□□□□□ -1.95
USP48-211ENST00000526044 ALMS1Q8TCU4 4167 aa2.89□□□□□ -1.95
USP48-211ENST00000526044 IGLV4-69A0A075B6H9 119 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 IGHV1-58A0A0C4DH39 117 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 C20orf202A1L168 122 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 C11orf86A6NJI1 115 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 DPM2O94777 84 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 IGKCP01834 107 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 PLNP26678 52 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 C6orf99Q4VX62 202 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 TMEM170BQ5T4T1 132 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 LINC01545Q5VT33 79 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 Q6ZRN7 208 aaPredicted RBP2.88□□□□□ -1.95
USP48-211ENST00000526044 LINC00337Q8N6G1 96 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 CHAC1Q9BUX1 264 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 CDKN2A-AS1Q9UH64 79 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 DNAH6Q9C0G6 4158 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 SACSQ9NZJ4 4579 aa2.88□□□□□ -1.95
USP48-211ENST00000526044 IGHV3-64A0A075B6Q5 118 aa2.87□□□□□ -1.95
USP48-211ENST00000526044 LRCOL1A6NCL2 159 aa2.87□□□□□ -1.95
USP48-211ENST00000526044 RTL8CO15255 209 aa2.87□□□□□ -1.95
USP48-211ENST00000526044 SPINK8P0C7L1 97 aa2.87□□□□□ -1.95
USP48-211ENST00000526044 SMIM6P0DI80 62 aa2.87□□□□□ -1.95
USP48-211ENST00000526044 ZNF22P17026 224 aaPredicted RBP2.87□□□□□ -1.95
USP48-211ENST00000526044 KRTAP12-2P59991 146 aa2.87□□□□□ -1.95
USP48-211ENST00000526044 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
USP48-211ENST00000526044 A0A087WTM6 91 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 TMEM223A0PJW6 202 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 LECT2O14960 151 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 HERVK_113P61574 105 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 JOSD1Q15040 202 aaPredicted RBP2.86□□□□□ -1.95
USP48-211ENST00000526044 ATOH7Q8N100 152 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 NKAPP1Q8N9T2 125 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 ORAOV1Q8WV07 137 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 TOMM7Q9P0U1 55 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 DNAH2Q9P225 4427 aa2.86□□□□□ -1.95
USP48-211ENST00000526044 LYSTQ99698 3801 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 LEPROTO15243 131 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 PSMB2P49721 201 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 CKS1BP61024 79 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 WFDC2Q14508 124 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 Q8IZM0 81 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 Q8N814 137 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 C15orf56Q8N910 161 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 COX7B2Q8TF08 81 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 LINC00526Q96FQ7 95 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 CAMK2N2Q96S95 79 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 DNAH17Q9UFH2 4485 aa2.85□□□□□ -1.95
USP48-211ENST00000526044 KMT2AQ03164 3969 aa2.84□□□□□ -1.95
USP48-211ENST00000526044 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.84□□□□□ -1.95
USP48-211ENST00000526044 GVQW2A0A096LPI5 108 aaPredicted RBP2.84□□□□□ -1.95
USP48-211ENST00000526044 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.84□□□□□ -1.95
USP48-211ENST00000526044 PSPHP1O15172 72 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms