RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 UBR1Q8IWV7 1749 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 CCDC141Q6ZP82 1450 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 LTN1O94822 1766 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 MAP3K1Q13233 1512 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 LOC100130705A0A1B0GUX0 176 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 LOC285095A0A1B0GVY8 99 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 J3QR89 54 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 M0R2Z0 102 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 B2MP61769 119 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 MT1HP80294 61 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 SMCO1Q147U7 214 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 TCEAL4Q96EI5 215 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 RERGLQ9H628 205 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 TPT1P8Q9HAU6 139 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 MYO9AB2RTY4 2548 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 A2ML1A8K2U0 1454 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 ALKQ9UM73 1620 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 CELSR3Q9NYQ7 3312 aa-0.67□□□□□ -2.52
CSDE1-210ENST00000525878 MAPKBP1O60336 1514 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 CHKB-CPT1BH3BT56 60 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 SSSCA1O60232 199 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 UBE2D3P61077 147 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 COPZ1P61923 177 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 UBE2D2P62837 147 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 BTG2P78543 158 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 WHAMMP3Q1A5X7 153 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 SMIM21Q3B7S5 101 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 NRKQ7Z2Y5 1582 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 COMMD6Q7Z4G1 85 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 C5orf38Q86SI9 138 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 TSTD1Q8NFU3 115 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 ANP32BQ92688 251 aaKnown RBP-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 MRPL34Q9BQ48 92 aaKnown RBP-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 PDCD10Q9BUL8 212 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 SNRNP25Q9BV90 132 aaKnown RBP-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 PRO1933Q9H354 126 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 LINC00846Q9NV44 126 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 CCDC167Q9P0B6 97 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 NESP48681 1621 aa-0.68□□□□□ -2.52
CSDE1-210ENST00000525878 SPTAN1Q13813 2472 aaKnown RBP-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 PLXNC1O60486 1568 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 COL6A5A8TX70 2615 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 PIGBOS1A0A0B4J2F0 54 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 A0A1B0GU69 56 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 FAM223BA6NKX1 122 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 H0YGG7 62 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 H3BNG1 76 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 UBA52P62987 128 aaKnown RBP-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 SEC11AP67812 179 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 DR1Q01658 176 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 KRTAP19-5Q3LI72 72 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 WFDC13Q8IUB5 93 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 FDCSPQ8NFU4 85 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 SELENOSQ9BQE4 189 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 FAIMQ9NVQ4 179 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 COPZ2Q9P299 210 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 ARL2-SNX15V9GYD0 113 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 ADGRG4Q8IZF6 3080 aa-0.69□□□□□ -2.52
CSDE1-210ENST00000525878 SAMD9Q5K651 1589 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 ANKRD36CQ5JPF3 1778 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 CFAP46Q8IYW2 2715 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 C9orf92A6NGG3 77 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 MIF4GDA9UHW6 222 aaKnown RBP-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 SAA2P0DJI9 122 aaPredicted RBP-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 ARPC4P59998 168 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 Q0VG73 95 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 CATR1Q13166 79 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 AKAP14Q86UN6 197 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 COPS9Q8WXC6 57 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 PPP3R2Q96LZ3 170 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 DOT1LQ8TEK3 1739 aa-0.7□□□□□ -2.52
CSDE1-210ENST00000525878 USP32Q8NFA0 1604 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 SCAPERQ9BY12 1400 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 ANKRD50Q9ULJ7 1429 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 WIZO95785 1651 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 CLTCQ00610 1675 aaKnown RBP-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 MGAQ8IWI9 3026 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 MYOM2P54296 1465 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 A0A087WVE0 104 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 OOSP1A8MZH6 123 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 I3L3M4 83 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 CCL22O00626 93 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 Q56UQ5 140 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 MEIG1Q5JSS6 88 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 C6orf201Q7Z4U5 140 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 C8orf59Q8N0T1 100 aaPredicted RBP-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 PYDC1Q8WXC3 89 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 ARL11Q969Q4 196 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 LINC00470Q9BZP3 86 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 UQCR10Q9UDW1 63 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 ARHGAP5Q13017 1502 aa-0.71□□□□□ -2.52
CSDE1-210ENST00000525878 A0A1B0GWA3 101 aa-0.72□□□□□ -2.52
CSDE1-210ENST00000525878 F6UZH7 168 aa-0.72□□□□□ -2.52
CSDE1-210ENST00000525878 SFTA2Q6UW10 78 aa-0.72□□□□□ -2.52
CSDE1-210ENST00000525878 HIGD1BQ9P298 99 aa-0.72□□□□□ -2.52
CSDE1-210ENST00000525878 CDKN2A-AS1Q9UH64 79 aa-0.72□□□□□ -2.52
CSDE1-210ENST00000525878 ZNF831Q5JPB2 1677 aa-0.72□□□□□ -2.53
CSDE1-210ENST00000525878 DDX60LQ5H9U9 1706 aaKnown RBP-0.72□□□□□ -2.53
CSDE1-210ENST00000525878 CLIP1P30622 1438 aa-0.72□□□□□ -2.53
CSDE1-210ENST00000525878 TRAV30A0A087WSZ9 112 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms