RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 C3orf22Q8N5N4 141 aa5.4□□□□□ -1.54
SPIDR-223ENST00000524033 SMIM11BQ8TCY0 68 aa5.4□□□□□ -1.54
SPIDR-223ENST00000524033 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
SPIDR-223ENST00000524033 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
SPIDR-223ENST00000524033 SND1-IT1Q9HBX3 110 aa5.4□□□□□ -1.54
SPIDR-223ENST00000524033 IGLV4-60A0A075B6I1 120 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 A0A087WYN8 130 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 H0YGX0 51 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 UQCRQO14949 82 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 LINC01561Q8N1V8 128 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 LINC00612Q8N6U2 182 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 CSNK1G2-AS1Q8NCQ2 148 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 LINC00526Q96FQ7 95 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 HYDINQ4G0P3 5121 aa5.39□□□□□ -1.55
SPIDR-223ENST00000524033 LCE6AA0A183 80 aa5.38□□□□□ -1.55
SPIDR-223ENST00000524033 UBE2L6O14933 153 aa5.38□□□□□ -1.55
SPIDR-223ENST00000524033 FHL2Q14192 279 aa5.38□□□□□ -1.55
SPIDR-223ENST00000524033 C9orf129Q5T035 196 aaKnown RBP5.38□□□□□ -1.55
SPIDR-223ENST00000524033 SMIM20Q8N5G0 67 aa5.38□□□□□ -1.55
SPIDR-223ENST00000524033 Q9HAA7 133 aa5.38□□□□□ -1.55
SPIDR-223ENST00000524033 NOP10Q9NPE3 64 aaKnown RBP5.38□□□□□ -1.55
SPIDR-223ENST00000524033 KLK5Q9Y337 293 aaPredicted RBP5.38□□□□□ -1.55
SPIDR-223ENST00000524033 TRBV6-8A0A0A6YYG3 113 aa5.37□□□□□ -1.55
SPIDR-223ENST00000524033 KRTAP9-6A0A140TA67 174 aa5.37□□□□□ -1.55
SPIDR-223ENST00000524033 COX7CP15954 63 aa5.37□□□□□ -1.55
SPIDR-223ENST00000524033 PLECQ15149 4684 aaKnown RBP5.37□□□□□ -1.55
SPIDR-223ENST00000524033 SS18Q15532 418 aa5.37□□□□□ -1.55
SPIDR-223ENST00000524033 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
SPIDR-223ENST00000524033 RETNQ9HD89 108 aa5.37□□□□□ -1.55
SPIDR-223ENST00000524033 A0A1B0GX51 115 aa5.36□□□□□ -1.55
SPIDR-223ENST00000524033 GAGE2AQ6NT46 116 aa5.36□□□□□ -1.55
SPIDR-223ENST00000524033 WFDC10AQ9H1F0 79 aa5.36□□□□□ -1.55
SPIDR-223ENST00000524033 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
SPIDR-223ENST00000524033 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.35□□□□□ -1.55
SPIDR-223ENST00000524033 ATOX1O00244 68 aa5.35□□□□□ -1.55
SPIDR-223ENST00000524033 CRYGAP11844 174 aa5.35□□□□□ -1.55
SPIDR-223ENST00000524033 LINC00158P58513 81 aa5.35□□□□□ -1.55
SPIDR-223ENST00000524033 NANOS2P60321 138 aaKnown RBP5.35□□□□□ -1.55
SPIDR-223ENST00000524033 C9orf153Q5TBE3 101 aa5.35□□□□□ -1.55
SPIDR-223ENST00000524033 Q8IZM0 81 aa5.35□□□□□ -1.55
SPIDR-223ENST00000524033 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
SPIDR-223ENST00000524033 LECT2O14960 151 aa5.34□□□□□ -1.55
SPIDR-223ENST00000524033 DNAL4O96015 105 aa5.34□□□□□ -1.55
SPIDR-223ENST00000524033 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
SPIDR-223ENST00000524033 KIR2DL5BQ8NHK3 375 aa5.34□□□□□ -1.55
SPIDR-223ENST00000524033 UPK3BQ9BT76 320 aa5.34□□□□□ -1.55
SPIDR-223ENST00000524033 C14orf132Q9NPU4 83 aa5.34□□□□□ -1.55
SPIDR-223ENST00000524033 LINC00846Q9NV44 126 aa5.34□□□□□ -1.55
SPIDR-223ENST00000524033 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
SPIDR-223ENST00000524033 TRGV2A0A075B6R0 118 aa5.33□□□□□ -1.56
SPIDR-223ENST00000524033 TRGV4A0A0C4DH28 118 aa5.33□□□□□ -1.56
SPIDR-223ENST00000524033 A0A1B0GUV1 79 aa5.33□□□□□ -1.56
SPIDR-223ENST00000524033 NDUFC2O95298 119 aa5.33□□□□□ -1.56
SPIDR-223ENST00000524033 RPL35AP18077 110 aaKnown RBP5.32□□□□□ -1.56
SPIDR-223ENST00000524033 APOC4P55056 127 aa5.32□□□□□ -1.56
SPIDR-223ENST00000524033 KIAA0087Q14695 138 aa5.32□□□□□ -1.56
SPIDR-223ENST00000524033 LYPD5Q6UWN5 251 aa5.32□□□□□ -1.56
SPIDR-223ENST00000524033 ORMDL1Q9P0S3 153 aa5.32□□□□□ -1.56
SPIDR-223ENST00000524033 CCKP06307 115 aa5.31□□□□□ -1.56
SPIDR-223ENST00000524033 IGKV3OR2-268A0A0C4DH90 116 aa5.3□□□□□ -1.56
SPIDR-223ENST00000524033 A0A0J9YWU9 116 aa5.3□□□□□ -1.56
SPIDR-223ENST00000524033 NCR3O14931 201 aa5.3□□□□□ -1.56
SPIDR-223ENST00000524033 PFN2P35080 140 aa5.3□□□□□ -1.56
SPIDR-223ENST00000524033 ATP5EP2Q5VTU8 51 aa5.3□□□□□ -1.56
SPIDR-223ENST00000524033 SERP2Q8N6R1 65 aa5.3□□□□□ -1.56
SPIDR-223ENST00000524033 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
SPIDR-223ENST00000524033 IGHV4-28A0A0C4DH34 117 aa5.29□□□□□ -1.56
SPIDR-223ENST00000524033 IGKV3D-7A0A0C4DH55 119 aa5.29□□□□□ -1.56
SPIDR-223ENST00000524033 SLPIP03973 132 aa5.29□□□□□ -1.56
SPIDR-223ENST00000524033 COX17Q14061 63 aa5.29□□□□□ -1.56
SPIDR-223ENST00000524033 DEFB135Q30KP9 77 aa5.29□□□□□ -1.56
SPIDR-223ENST00000524033 CYSTM1Q9H1C7 97 aa5.29□□□□□ -1.56
SPIDR-223ENST00000524033 ALMS1Q8TCU4 4167 aa5.29□□□□□ -1.56
SPIDR-223ENST00000524033 KMT2AQ03164 3969 aa5.28□□□□□ -1.56
SPIDR-223ENST00000524033 JMJD7-PLA2G4BH0Y9G9 81 aa5.28□□□□□ -1.56
SPIDR-223ENST00000524033 LY6G6CO95867 125 aa5.28□□□□□ -1.56
SPIDR-223ENST00000524033 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
SPIDR-223ENST00000524033 C6orf226Q5I0X4 101 aa5.28□□□□□ -1.56
SPIDR-223ENST00000524033 Q8N814 137 aa5.28□□□□□ -1.56
SPIDR-223ENST00000524033 Q8NDZ9 215 aa5.28□□□□□ -1.56
SPIDR-223ENST00000524033 TRBV10-3A0A0K0K1G6 114 aa5.27□□□□□ -1.57
SPIDR-223ENST00000524033 hADV29S1A0JD25 119 aa5.27□□□□□ -1.57
SPIDR-223ENST00000524033 NUPR2A6NF83 97 aa5.27□□□□□ -1.57
SPIDR-223ENST00000524033 USP17L23D6RBM5 183 aa5.27□□□□□ -1.57
SPIDR-223ENST00000524033 J3KT08 172 aa5.27□□□□□ -1.57
SPIDR-223ENST00000524033 S100A7L2Q5SY68 101 aa5.27□□□□□ -1.57
SPIDR-223ENST00000524033 CD164L2Q6UWJ8 174 aa5.27□□□□□ -1.57
SPIDR-223ENST00000524033 OR13C6PQ8NH95 151 aa5.27□□□□□ -1.57
SPIDR-223ENST00000524033 A0A087WVE0 104 aa5.26□□□□□ -1.57
SPIDR-223ENST00000524033 SMIM9A6NGZ8 99 aa5.26□□□□□ -1.57
SPIDR-223ENST00000524033 XCL1P47992 114 aa5.26□□□□□ -1.57
SPIDR-223ENST00000524033 TMEM258P61165 79 aa5.26□□□□□ -1.57
SPIDR-223ENST00000524033 C6orf223Q8N319 242 aa5.26□□□□□ -1.57
SPIDR-223ENST00000524033 LINC00476Q8WZB0 136 aa5.26□□□□□ -1.57
SPIDR-223ENST00000524033 C11orf68Q9H3H3 251 aaKnown RBP5.26□□□□□ -1.57
SPIDR-223ENST00000524033 PRO0255Q9UI72 69 aa5.26□□□□□ -1.57
SPIDR-223ENST00000524033 HECTD4Q9Y4D8 3996 aa5.25□□□□□ -1.57
SPIDR-223ENST00000524033 LOC110117498A0A087WWA1 95 aa5.25□□□□□ -1.57
SPIDR-223ENST00000524033 TMEM256-PLSCR3K7ERE1 68 aa5.25□□□□□ -1.57
SPIDR-223ENST00000524033 BCE1O60756 84 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms