RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ZNF706Q9Y5V0 76 aaPredicted RBP3.61□□□□□ -1.83
PABPC1-220ENST00000522658 SRP19P09132 144 aaKnown RBP3.6□□□□□ -1.83
PABPC1-220ENST00000522658 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
PABPC1-220ENST00000522658 RAB5BP61020 215 aa3.6□□□□□ -1.83
PABPC1-220ENST00000522658 PRLHP81277 87 aa3.6□□□□□ -1.83
PABPC1-220ENST00000522658 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
PABPC1-220ENST00000522658 COX7B2Q8TF08 81 aa3.6□□□□□ -1.83
PABPC1-220ENST00000522658 CDKN2A-AS1Q9UH64 79 aa3.6□□□□□ -1.83
PABPC1-220ENST00000522658 H3BRM9 83 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 K7EMI3 77 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 RPL24P83731 157 aaKnown RBP3.59□□□□□ -1.83
PABPC1-220ENST00000522658 PEA15Q15121 130 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 ZC2HC1BQ5TFG8 222 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 AKAP14Q86UN6 197 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 CBLN2Q8IUK8 224 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 FAM19A2Q8N3H0 131 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 Q8N8P6 123 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 HIGD2AQ9BW72 106 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 GNB1LQ9BYB4 327 aa3.59□□□□□ -1.83
PABPC1-220ENST00000522658 NXT2Q9NPJ8 142 aaKnown RBP3.59□□□□□ -1.83
PABPC1-220ENST00000522658 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
PABPC1-220ENST00000522658 PDZD11Q5EBL8 140 aa3.58□□□□□ -1.84
PABPC1-220ENST00000522658 DAND5Q8N907 189 aa3.58□□□□□ -1.84
PABPC1-220ENST00000522658 FAM104AQ969W3 186 aa3.58□□□□□ -1.84
PABPC1-220ENST00000522658 AMELXQ99217 191 aa3.58□□□□□ -1.84
PABPC1-220ENST00000522658 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
PABPC1-220ENST00000522658 IGLV5-37A0A075B6J1 123 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 A0A1B0GXF2 115 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 LINC01549A6NIU2 74 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 SMIM1B2RUZ4 78 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 PFN2P35080 140 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 S100A12P80511 92 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 SCGB3A1Q96QR1 104 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
PABPC1-220ENST00000522658 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
PABPC1-220ENST00000522658 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
PABPC1-220ENST00000522658 FAM19A3Q7Z5A8 133 aa3.56□□□□□ -1.84
PABPC1-220ENST00000522658 C3orf22Q8N5N4 141 aa3.56□□□□□ -1.84
PABPC1-220ENST00000522658 FAT4Q6V0I7 4981 aa3.56□□□□□ -1.84
PABPC1-220ENST00000522658 TMEM238C9JI98 176 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 ATP6V1G1O75348 118 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 SCO1O75880 301 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 RAB14P61106 215 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 SFTA2Q6UW10 78 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 ERASQ7Z444 233 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 KRTAP13-1Q8IUC0 172 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 TOMM6Q96B49 74 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 SMCO4Q9NRQ5 59 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 CRCT1Q9UGL9 99 aa3.55□□□□□ -1.84
PABPC1-220ENST00000522658 hCG_2014768A0A024R1R8 64 aa3.54□□□□□ -1.84
PABPC1-220ENST00000522658 ETDCA0A1B0GVM5 59 aa3.54□□□□□ -1.84
PABPC1-220ENST00000522658 IGIPA6NJ69 53 aa3.54□□□□□ -1.84
PABPC1-220ENST00000522658 SPINK1P00995 79 aa3.54□□□□□ -1.84
PABPC1-220ENST00000522658 MT-ND4LP03901 98 aa3.54□□□□□ -1.84
PABPC1-220ENST00000522658 NDUFA6P56556 154 aa3.54□□□□□ -1.84
PABPC1-220ENST00000522658 Q8NBF4 154 aa3.54□□□□□ -1.84
PABPC1-220ENST00000522658 PLEKHB2Q96CS7 222 aa3.54□□□□□ -1.84
PABPC1-220ENST00000522658 COX17Q14061 63 aa3.53□□□□□ -1.84
PABPC1-220ENST00000522658 FA2HQ7L5A8 372 aa3.53□□□□□ -1.84
PABPC1-220ENST00000522658 SPRR4Q96PI1 79 aa3.53□□□□□ -1.84
PABPC1-220ENST00000522658 SND1-IT1Q9HBX3 110 aa3.53□□□□□ -1.84
PABPC1-220ENST00000522658 ERG28Q9UKR5 140 aa3.53□□□□□ -1.84
PABPC1-220ENST00000522658 IGLV9-49A0A0B4J1Y8 123 aa3.52□□□□□ -1.85
PABPC1-220ENST00000522658 M0R378 163 aa3.52□□□□□ -1.85
PABPC1-220ENST00000522658 CFC1BP0CG36 223 aa3.52□□□□□ -1.85
PABPC1-220ENST00000522658 VPREB1P12018 145 aa3.52□□□□□ -1.85
PABPC1-220ENST00000522658 LINC00158P58513 81 aa3.52□□□□□ -1.85
PABPC1-220ENST00000522658 PMVKQ15126 192 aa3.52□□□□□ -1.85
PABPC1-220ENST00000522658 KRTAP13-3Q3SY46 172 aa3.52□□□□□ -1.85
PABPC1-220ENST00000522658 ZNF625Q96I27 306 aaPredicted RBP3.52□□□□□ -1.85
PABPC1-220ENST00000522658 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
PABPC1-220ENST00000522658 IGLV5-45A0A087WSX0 123 aa3.51□□□□□ -1.85
PABPC1-220ENST00000522658 MOBPQ13875 183 aa3.51□□□□□ -1.85
PABPC1-220ENST00000522658 C9orf153Q5TBE3 101 aa3.51□□□□□ -1.85
PABPC1-220ENST00000522658 CST9LQ9H4G1 147 aa3.51□□□□□ -1.85
PABPC1-220ENST00000522658 C9JQL5 133 aa3.5□□□□□ -1.85
PABPC1-220ENST00000522658 NCR3O14931 201 aa3.5□□□□□ -1.85
PABPC1-220ENST00000522658 SLC25A20O43772 301 aa3.5□□□□□ -1.85
PABPC1-220ENST00000522658 S100PP25815 95 aa3.5□□□□□ -1.85
PABPC1-220ENST00000522658 MEIG1Q5JSS6 88 aa3.5□□□□□ -1.85
PABPC1-220ENST00000522658 TMEM170BQ5T4T1 132 aa3.5□□□□□ -1.85
PABPC1-220ENST00000522658 M0R2T5 61 aa3.49□□□□□ -1.85
PABPC1-220ENST00000522658 ADCYAP1P18509 176 aa3.49□□□□□ -1.85
PABPC1-220ENST00000522658 RPS29P62273 56 aaKnown RBP3.49□□□□□ -1.85
PABPC1-220ENST00000522658 KIAA1644Q3SXP7 199 aa3.49□□□□□ -1.85
PABPC1-220ENST00000522658 GAGE2AQ6NT46 116 aa3.49□□□□□ -1.85
PABPC1-220ENST00000522658 A0A0U1RRA0 63 aa3.48□□□□□ -1.85
PABPC1-220ENST00000522658 IGLC3P0DOY3 106 aa3.48□□□□□ -1.85
PABPC1-220ENST00000522658 BOD1L2Q8IYS8 172 aa3.48□□□□□ -1.85
PABPC1-220ENST00000522658 SMCR5Q8TEV8 140 aa3.48□□□□□ -1.85
PABPC1-220ENST00000522658 LIMD2Q9BT23 127 aa3.48□□□□□ -1.85
PABPC1-220ENST00000522658 LINC00587B1AMM8 73 aa3.47□□□□□ -1.85
PABPC1-220ENST00000522658 ZNF22P17026 224 aaPredicted RBP3.47□□□□□ -1.85
PABPC1-220ENST00000522658 COX6B2Q6YFQ2 88 aa3.47□□□□□ -1.85
PABPC1-220ENST00000522658 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
PABPC1-220ENST00000522658 Q8N377 158 aa3.47□□□□□ -1.85
PABPC1-220ENST00000522658 MIEN1Q9BRT3 115 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms