RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 C20orf202A1L168 122 aa7.38□□□□□ -1.23
HPS4-218ENST00000519774 J3QQQ9 107 aa7.38□□□□□ -1.23
HPS4-218ENST00000519774 LGALS3P17931 250 aaKnown RBP7.38□□□□□ -1.23
HPS4-218ENST00000519774 LINC00158P58513 81 aa7.38□□□□□ -1.23
HPS4-218ENST00000519774 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
HPS4-218ENST00000519774 FAT1Q14517 4588 aa7.37□□□□□ -1.23
HPS4-218ENST00000519774 HERV-K104P63124 156 aa7.37□□□□□ -1.23
HPS4-218ENST00000519774 UBE2BP63146 152 aa7.37□□□□□ -1.23
HPS4-218ENST00000519774 COX17Q14061 63 aa7.37□□□□□ -1.23
HPS4-218ENST00000519774 HIST1H2BLQ99880 126 aa7.37□□□□□ -1.23
HPS4-218ENST00000519774 E9PLD3 99 aa7.36□□□□□ -1.23
HPS4-218ENST00000519774 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
HPS4-218ENST00000519774 HNRNPA3P51991 378 aaKnown RBP7.36□□□□□ -1.23
HPS4-218ENST00000519774 SNRPEP62304 92 aaKnown RBP7.36□□□□□ -1.23
HPS4-218ENST00000519774 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
HPS4-218ENST00000519774 NMUP48645 174 aa7.35□□□□□ -1.23
HPS4-218ENST00000519774 ATOH7Q8N100 152 aa7.35□□□□□ -1.23
HPS4-218ENST00000519774 C22orf24Q9Y442 160 aa7.35□□□□□ -1.23
HPS4-218ENST00000519774 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
HPS4-218ENST00000519774 ABCA13Q86UQ4 5058 aa7.34□□□□□ -1.23
HPS4-218ENST00000519774 KRTAP11-1Q8IUC1 163 aa7.34□□□□□ -1.23
HPS4-218ENST00000519774 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
HPS4-218ENST00000519774 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
HPS4-218ENST00000519774 GAGE10A6NGK3 116 aa7.33□□□□□ -1.24
HPS4-218ENST00000519774 LBHQ53QV2 105 aaPredicted RBP7.33□□□□□ -1.24
HPS4-218ENST00000519774 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
HPS4-218ENST00000519774 MIR7-3HGQ8N6C7 128 aa7.33□□□□□ -1.24
HPS4-218ENST00000519774 PLA2G2DQ9UNK4 145 aa7.33□□□□□ -1.24
HPS4-218ENST00000519774 C5orf52A6NGY3 159 aa7.32□□□□□ -1.24
HPS4-218ENST00000519774 LINC00587B1AMM8 73 aa7.32□□□□□ -1.24
HPS4-218ENST00000519774 MRPL55Q7Z7F7 128 aaKnown RBP7.32□□□□□ -1.24
HPS4-218ENST00000519774 TP73-AS1Q9UF72 201 aa7.32□□□□□ -1.24
HPS4-218ENST00000519774 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
HPS4-218ENST00000519774 IGKV2D-26A0A0A0MRZ7 120 aa7.31□□□□□ -1.24
HPS4-218ENST00000519774 DAND5Q8N907 189 aa7.31□□□□□ -1.24
HPS4-218ENST00000519774 RPL37AP8A6NKH3 93 aa7.3□□□□□ -1.24
HPS4-218ENST00000519774 VPREB1P12018 145 aa7.3□□□□□ -1.24
HPS4-218ENST00000519774 AKR1D1P51857 326 aa7.3□□□□□ -1.24
HPS4-218ENST00000519774 RPL24P83731 157 aaKnown RBP7.3□□□□□ -1.24
HPS4-218ENST00000519774 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
HPS4-218ENST00000519774 Q8NDZ9 215 aa7.3□□□□□ -1.24
HPS4-218ENST00000519774 LINC00167Q96N53 147 aa7.3□□□□□ -1.24
HPS4-218ENST00000519774 TTTY13Q9BZ97 58 aa7.3□□□□□ -1.24
HPS4-218ENST00000519774 A0A0J9YXY3 114 aa7.29□□□□□ -1.24
HPS4-218ENST00000519774 ZNF815PA8K554 130 aa7.29□□□□□ -1.24
HPS4-218ENST00000519774 BOD1L2Q8IYS8 172 aa7.29□□□□□ -1.24
HPS4-218ENST00000519774 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
HPS4-218ENST00000519774 IGKV2-28A0A075B6P5 120 aa7.27□□□□□ -1.25
HPS4-218ENST00000519774 SCGB1D1O95968 90 aa7.27□□□□□ -1.25
HPS4-218ENST00000519774 IGKV2D-28P01615 120 aa7.27□□□□□ -1.25
HPS4-218ENST00000519774 IGLV7-43P04211 117 aa7.27□□□□□ -1.25
HPS4-218ENST00000519774 NPC2P61916 151 aa7.27□□□□□ -1.25
HPS4-218ENST00000519774 MIEN1Q9BRT3 115 aa7.27□□□□□ -1.25
HPS4-218ENST00000519774 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
HPS4-218ENST00000519774 NCR3O14931 201 aa7.26□□□□□ -1.25
HPS4-218ENST00000519774 ADAMTSL4-AS1Q5T5F5 129 aa7.26□□□□□ -1.25
HPS4-218ENST00000519774 SPINK6Q6UWN8 80 aa7.26□□□□□ -1.25
HPS4-218ENST00000519774 HSBP1L1C9JCN9 74 aa7.25□□□□□ -1.25
HPS4-218ENST00000519774 M0R378 163 aa7.24□□□□□ -1.25
HPS4-218ENST00000519774 SRSF9Q13242 221 aaKnown RBP eCLIP7.24□□□□□ -1.25
HPS4-218ENST00000519774 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
HPS4-218ENST00000519774 PCP2Q8IVA1 136 aa7.24□□□□□ -1.25
HPS4-218ENST00000519774 PKHD1L1Q86WI1 4243 aa7.24□□□□□ -1.25
HPS4-218ENST00000519774 IGLV1-50A0A075B6I6 118 aa7.23□□□□□ -1.25
HPS4-218ENST00000519774 KRTAP29-1A8MX34 341 aaPredicted RBP7.23□□□□□ -1.25
HPS4-218ENST00000519774 TIMM17BO60830 172 aa7.23□□□□□ -1.25
HPS4-218ENST00000519774 SOSTDC1Q6X4U4 206 aa7.23□□□□□ -1.25
HPS4-218ENST00000519774 LITAFQ99732 161 aa7.23□□□□□ -1.25
HPS4-218ENST00000519774 LOC107984156A0A0G2JMH3 177 aa7.22□□□□□ -1.25
HPS4-218ENST00000519774 TMEM238C9JI98 176 aa7.22□□□□□ -1.25
HPS4-218ENST00000519774 BCE1O60756 84 aa7.22□□□□□ -1.25
HPS4-218ENST00000519774 ARL17AQ8IVW1 177 aa7.22□□□□□ -1.25
HPS4-218ENST00000519774 OXTP01178 125 aa7.21□□□□□ -1.26
HPS4-218ENST00000519774 REG3GQ6UW15 175 aa7.21□□□□□ -1.26
HPS4-218ENST00000519774 LINC00308Q8TCZ7 52 aa7.21□□□□□ -1.26
HPS4-218ENST00000519774 DIRC1Q969H9 104 aa7.21□□□□□ -1.26
HPS4-218ENST00000519774 TMEM126AQ9H061 195 aa7.21□□□□□ -1.26
HPS4-218ENST00000519774 MYCBP2O75592 4640 aa7.2□□□□□ -1.26
HPS4-218ENST00000519774 H0Y9J4 135 aa7.2□□□□□ -1.26
HPS4-218ENST00000519774 ZNF861PO60384 105 aa7.2□□□□□ -1.26
HPS4-218ENST00000519774 UBE2AP49459 152 aa7.2□□□□□ -1.26
HPS4-218ENST00000519774 SPANXB1Q9NS25 103 aaPredicted RBP7.2□□□□□ -1.26
HPS4-218ENST00000519774 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
HPS4-218ENST00000519774 NDUFC2O95298 119 aa7.19□□□□□ -1.26
HPS4-218ENST00000519774 RPL28P46779 137 aaKnown RBP7.19□□□□□ -1.26
HPS4-218ENST00000519774 PRLHP81277 87 aa7.19□□□□□ -1.26
HPS4-218ENST00000519774 FAM19A1Q7Z5A9 133 aa7.19□□□□□ -1.26
HPS4-218ENST00000519774 DMBT1Q9UGM3 2413 aaPredicted RBP7.19□□□□□ -1.26
HPS4-218ENST00000519774 TRBV10-2A0A0K0K1G8 114 aa7.18□□□□□ -1.26
HPS4-218ENST00000519774 PRYO14603 147 aa7.18□□□□□ -1.26
HPS4-218ENST00000519774 SPANXDQ9BXN6 97 aa7.18□□□□□ -1.26
HPS4-218ENST00000519774 SPANXCQ9NY87 97 aa7.18□□□□□ -1.26
HPS4-218ENST00000519774 DDTP30046 118 aa7.17□□□□□ -1.26
HPS4-218ENST00000519774 JOSD1Q15040 202 aaPredicted RBP7.17□□□□□ -1.26
HPS4-218ENST00000519774 S100A7L2Q5SY68 101 aa7.17□□□□□ -1.26
HPS4-218ENST00000519774 S100A12P80511 92 aa7.16□□□□□ -1.26
HPS4-218ENST00000519774 PAM16Q9Y3D7 125 aa7.16□□□□□ -1.26
HPS4-218ENST00000519774 KRTAP13-1Q8IUC0 172 aa7.15□□□□□ -1.26
HPS4-218ENST00000519774 LINC01600Q96MT4 127 aa7.15□□□□□ -1.26
HPS4-218ENST00000519774 VAMP8Q9BV40 100 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms