RNA–Protein interactions for RNA: ENST00000516759.1

RNU7-28P-201, Transcript of RNA, U7 small nuclear 28 pseudogene, humanhuman

BASIC

Gene RNU7-28P, Length 62 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU7-28P-201ENST00000516759 LINC00587B1AMM8 73 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 H0Y9P7 68 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 S100A1P23297 94 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 TACC2O95359 2948 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 MUC17Q685J3 4493 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 MON2Q7Z3U7 1717 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 NRXN1Q9ULB1 1477 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 HTTP42858 3142 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 ANKRD36A6QL64 1941 aa-0.87□□□□□ -2.55
RNU7-28P-201ENST00000516759 EPG5Q9HCE0 2579 aa-0.88□□□□□ -2.55
RNU7-28P-201ENST00000516759 TROQ12816 1431 aaPredicted RBP-0.88□□□□□ -2.55
RNU7-28P-201ENST00000516759 MAPKBP1O60336 1514 aa-0.88□□□□□ -2.55
RNU7-28P-201ENST00000516759 WFDC13Q8IUB5 93 aa-0.88□□□□□ -2.55
RNU7-28P-201ENST00000516759 CACFD1Q9UGQ2 172 aa-0.88□□□□□ -2.55
RNU7-28P-201ENST00000516759 CCDC141Q6ZP82 1450 aa-0.88□□□□□ -2.55
RNU7-28P-201ENST00000516759 COL14A1Q05707 1796 aaKnown RBP-0.88□□□□□ -2.55
RNU7-28P-201ENST00000516759 VPS13DQ5THJ4 4388 aa-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 CUBNO60494 3623 aa-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 TMEM262E9PQX1 116 aa-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 HEPN1Q6WQI6 88 aa-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 C5P01031 1676 aa-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 NBASA2RRP1 2371 aa-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 TRANK1O15050 2925 aa-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 HIVEP1P15822 2718 aa-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 CICQ96RK0 1608 aaPredicted RBP-0.89□□□□□ -2.55
RNU7-28P-201ENST00000516759 EIF4G3O43432 1585 aaKnown RBP-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 SAMD9Q5K651 1589 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 MLH3Q9UHC1 1453 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 H3BQ15 152 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 H3BQF6 201 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 H7BZZ5 65 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 MT1AP04731 61 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 GNGT1P63211 74 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 CGREF1Q99674 301 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 C2orf88Q9BSF0 95 aa-0.9□□□□□ -2.55
RNU7-28P-201ENST00000516759 HECTD1Q9ULT8 2610 aa-0.91□□□□□ -2.55
RNU7-28P-201ENST00000516759 TRBV25-1A0A075B6N4 114 aa-0.91□□□□□ -2.56
RNU7-28P-201ENST00000516759 PSMG4Q5JS54 123 aa-0.91□□□□□ -2.56
RNU7-28P-201ENST00000516759 KNL1Q8NG31 2342 aa-0.91□□□□□ -2.56
RNU7-28P-201ENST00000516759 PRDM15P57071 1507 aaPredicted RBP-0.91□□□□□ -2.56
RNU7-28P-201ENST00000516759 ZFYVE16Q7Z3T8 1539 aa-0.91□□□□□ -2.56
RNU7-28P-201ENST00000516759 DMXL1Q9Y485 3027 aa-0.91□□□□□ -2.56
RNU7-28P-201ENST00000516759 APOBP04114 4563 aaKnown RBP-0.92□□□□□ -2.56
RNU7-28P-201ENST00000516759 BCORQ6W2J9 1755 aa-0.92□□□□□ -2.56
RNU7-28P-201ENST00000516759 TRBV7-7A0A0K0K1E9 115 aa-0.92□□□□□ -2.56
RNU7-28P-201ENST00000516759 ARMS2P0C7Q2 107 aa-0.92□□□□□ -2.56
RNU7-28P-201ENST00000516759 GNG8Q9UK08 70 aa-0.92□□□□□ -2.56
RNU7-28P-201ENST00000516759 USP9YO00507 2555 aaPredicted RBP-0.92□□□□□ -2.56
RNU7-28P-201ENST00000516759 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.92□□□□□ -2.56
RNU7-28P-201ENST00000516759 VPS13BQ7Z7G8 4022 aa-0.92□□□□□ -2.56
RNU7-28P-201ENST00000516759 EPPK1P58107 5090 aaKnown RBP-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 ITPR3Q14573 2671 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 ANK3Q12955 4377 aaKnown RBP-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 SPTY2D1-AS1A0A0U1RR47 76 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 EFCAB10A6NFE3 127 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 GNGT2O14610 69 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 MT-ATP8P03928 68 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 KRTDAPP60985 99 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 TMEM203Q969S6 136 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 TRGV9Q99603 122 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 VAMP8Q9BV40 100 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 HIGD1BQ9P298 99 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 CDKN2A-AS1Q9UH64 79 aa-0.93□□□□□ -2.56
RNU7-28P-201ENST00000516759 ANKRD36BQ8N2N9 1353 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 LAMA1P25391 3075 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 TEP1Q99973 2627 aaKnown RBP-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 TRAV30A0A087WSZ9 112 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 CCL22O00626 93 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 IGLC2P0DOY2 106 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 IGLC3P0DOY3 106 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 PMCHL1Q16048 86 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 RGPD2P0DJD1 1756 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 ZZEF1O43149 2961 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 PREX1Q8TCU6 1659 aa-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 FASNP49327 2511 aaKnown RBP-0.94□□□□□ -2.56
RNU7-28P-201ENST00000516759 C4AP0C0L4 1744 aa-0.95□□□□□ -2.56
RNU7-28P-201ENST00000516759 C4BP0C0L5 1744 aa-0.95□□□□□ -2.56
RNU7-28P-201ENST00000516759 SPG11Q96JI7 2443 aa-0.95□□□□□ -2.56
RNU7-28P-201ENST00000516759 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.95□□□□□ -2.56
RNU7-28P-201ENST00000516759 H0YGG7 62 aa-0.95□□□□□ -2.56
RNU7-28P-201ENST00000516759 PSENENQ9NZ42 101 aa-0.95□□□□□ -2.56
RNU7-28P-201ENST00000516759 QSER1Q2KHR3 1735 aa-0.95□□□□□ -2.56
RNU7-28P-201ENST00000516759 CLIP1P30622 1438 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 MAGI2Q86UL8 1455 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 H3BNG1 76 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 UQCRHP07919 91 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 GTF2H5Q6ZYL4 71 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 PMCHL2Q9BQD1 86 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 CRYBG1Q9Y4K1 1723 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 SCN11AQ9UI33 1791 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 NEBP20929 6669 aa-0.96□□□□□ -2.56
RNU7-28P-201ENST00000516759 RAPGEF2Q9Y4G8 1499 aa-0.97□□□□□ -2.56
RNU7-28P-201ENST00000516759 RGPD1P0DJD0 1748 aa-0.97□□□□□ -2.56
RNU7-28P-201ENST00000516759 KALRNO60229 2985 aa-0.97□□□□□ -2.56
RNU7-28P-201ENST00000516759 KIF20BQ96Q89 1820 aa-0.98□□□□□ -2.57
RNU7-28P-201ENST00000516759 FAM135AQ9P2D6 1515 aa-0.98□□□□□ -2.57
RNU7-28P-201ENST00000516759 F8WEM9 126 aa-0.98□□□□□ -2.57
RNU7-28P-201ENST00000516759 NDUFC1O43677 76 aa-0.98□□□□□ -2.57
RNU7-28P-201ENST00000516759 NDUFA3O95167 84 aa-0.98□□□□□ -2.57
RNU7-28P-201ENST00000516759 MPC2O95563 127 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms