RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 DOPEY2Q9Y3R5 2298 aa0.38□□□□□ -2.35
RNU6-488P-201ENST00000515918 COX8AP10176 69 aa0.38□□□□□ -2.35
RNU6-488P-201ENST00000515918 GVINP1Q7Z2Y8 2422 aa0.38□□□□□ -2.35
RNU6-488P-201ENST00000515918 TSC2P49815 1807 aa0.37□□□□□ -2.35
RNU6-488P-201ENST00000515918 A0A1B0GUT8 65 aa0.37□□□□□ -2.35
RNU6-488P-201ENST00000515918 ANKRD36A6QL64 1941 aa0.36□□□□□ -2.35
RNU6-488P-201ENST00000515918 LRRC7Q96NW7 1537 aa0.36□□□□□ -2.35
RNU6-488P-201ENST00000515918 OTOGQ6ZRI0 2925 aa0.36□□□□□ -2.35
RNU6-488P-201ENST00000515918 UNC79Q9P2D8 2635 aa0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 ARHGAP35Q9NRY4 1499 aa0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 PKDREJQ9NTG1 2253 aa0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 CPSF4LA6NMK7 179 aaKnown RBP0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 KLK9Q2XQG4 91 aa0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 DEFB105AQ8NG35 78 aa0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 DIP2BQ9P265 1576 aa0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 RGPD1P0DJD0 1748 aa0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 PKD1L3Q7Z443 1732 aa0.35□□□□□ -2.35
RNU6-488P-201ENST00000515918 I3L3M4 83 aa0.34□□□□□ -2.36
RNU6-488P-201ENST00000515918 ACYP1P07311 99 aa0.34□□□□□ -2.36
RNU6-488P-201ENST00000515918 FXYD6Q9H0Q3 95 aa0.34□□□□□ -2.36
RNU6-488P-201ENST00000515918 SPTY2D1-AS1A0A0U1RR47 76 aa0.33□□□□□ -2.36
RNU6-488P-201ENST00000515918 CEBPZOSA8MTT3 80 aa0.33□□□□□ -2.36
RNU6-488P-201ENST00000515918 ERVK-7P63135 1459 aa0.33□□□□□ -2.36
RNU6-488P-201ENST00000515918 LRRC9Q6ZRR7 1453 aa0.33□□□□□ -2.36
RNU6-488P-201ENST00000515918 RGPD2P0DJD1 1756 aa0.32□□□□□ -2.36
RNU6-488P-201ENST00000515918 SCRIBQ14160 1630 aa0.32□□□□□ -2.36
RNU6-488P-201ENST00000515918 MRPL34Q9BQ48 92 aaKnown RBP0.32□□□□□ -2.36
RNU6-488P-201ENST00000515918 ST20Q9HBF5 79 aa0.32□□□□□ -2.36
RNU6-488P-201ENST00000515918 APLNQ9ULZ1 77 aa0.32□□□□□ -2.36
RNU6-488P-201ENST00000515918 NCOR2Q9Y618 2525 aa0.32□□□□□ -2.36
RNU6-488P-201ENST00000515918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.32□□□□□ -2.36
RNU6-488P-201ENST00000515918 USP32Q8NFA0 1604 aa0.31□□□□□ -2.36
RNU6-488P-201ENST00000515918 CHD6Q8TD26 2715 aa0.31□□□□□ -2.36
RNU6-488P-201ENST00000515918 KANTRA0A1W2PQU2 76 aa0.31□□□□□ -2.36
RNU6-488P-201ENST00000515918 COX7BP24311 80 aa0.31□□□□□ -2.36
RNU6-488P-201ENST00000515918 MUC5BQ9HC84 5762 aaPredicted RBP0.31□□□□□ -2.36
RNU6-488P-201ENST00000515918 TRAV21A0A0B4J279 112 aa0.3□□□□□ -2.36
RNU6-488P-201ENST00000515918 S100A13Q99584 98 aa0.3□□□□□ -2.36
RNU6-488P-201ENST00000515918 HIVEP3Q5T1R4 2406 aa0.3□□□□□ -2.36
RNU6-488P-201ENST00000515918 HUWE1Q7Z6Z7 4374 aaKnown RBP0.3□□□□□ -2.36
RNU6-488P-201ENST00000515918 ZNF831Q5JPB2 1677 aa0.3□□□□□ -2.36
RNU6-488P-201ENST00000515918 DCAF1Q9Y4B6 1507 aa0.29□□□□□ -2.36
RNU6-488P-201ENST00000515918 ADIRFQ15847 76 aa0.29□□□□□ -2.36
RNU6-488P-201ENST00000515918 H1FX-AS1Q4G0G2 97 aa0.29□□□□□ -2.36
RNU6-488P-201ENST00000515918 GAFA1Q96PS6 74 aa0.29□□□□□ -2.36
RNU6-488P-201ENST00000515918 TNXBP22105 4242 aa0.29□□□□□ -2.36
RNU6-488P-201ENST00000515918 NCOR1O75376 2440 aa0.29□□□□□ -2.36
RNU6-488P-201ENST00000515918 TENM4Q6N022 2769 aa0.28□□□□□ -2.36
RNU6-488P-201ENST00000515918 QSER1Q2KHR3 1735 aa0.28□□□□□ -2.36
RNU6-488P-201ENST00000515918 KIF20BQ96Q89 1820 aa0.28□□□□□ -2.36
RNU6-488P-201ENST00000515918 FAT2Q9NYQ8 4349 aa0.28□□□□□ -2.37
RNU6-488P-201ENST00000515918 VWFP04275 2813 aa0.28□□□□□ -2.37
RNU6-488P-201ENST00000515918 SUPT6HQ7KZ85 1726 aaKnown RBP0.27□□□□□ -2.37
RNU6-488P-201ENST00000515918 PRM1P04553 51 aa0.27□□□□□ -2.37
RNU6-488P-201ENST00000515918 LELP1Q5T871 98 aa0.27□□□□□ -2.37
RNU6-488P-201ENST00000515918 WNK2Q9Y3S1 2297 aa0.27□□□□□ -2.37
RNU6-488P-201ENST00000515918 CELSR1Q9NYQ6 3014 aa0.27□□□□□ -2.37
RNU6-488P-201ENST00000515918 HRNRQ86YZ3 2850 aaPredicted RBP0.26□□□□□ -2.37
RNU6-488P-201ENST00000515918 SPINK4O60575 86 aa0.26□□□□□ -2.37
RNU6-488P-201ENST00000515918 NCOA2Q15596 1464 aa0.26□□□□□ -2.37
RNU6-488P-201ENST00000515918 CEP170BQ9Y4F5 1589 aaPredicted RBP0.25□□□□□ -2.37
RNU6-488P-201ENST00000515918 CLIP1P30622 1438 aa0.25□□□□□ -2.37
RNU6-488P-201ENST00000515918 H3BUT2 72 aa0.25□□□□□ -2.37
RNU6-488P-201ENST00000515918 UBR5O95071 2799 aaPredicted RBP0.25□□□□□ -2.37
RNU6-488P-201ENST00000515918 URB2Q14146 1524 aaKnown RBP0.24□□□□□ -2.37
RNU6-488P-201ENST00000515918 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.24□□□□□ -2.37
RNU6-488P-201ENST00000515918 BVES-AS1Q5T3Y7 98 aa0.24□□□□□ -2.37
RNU6-488P-201ENST00000515918 WFDC9Q8NEX5 89 aa0.24□□□□□ -2.37
RNU6-488P-201ENST00000515918 IGSF10Q6WRI0 2623 aa0.24□□□□□ -2.37
RNU6-488P-201ENST00000515918 KDM5DQ9BY66 1539 aa0.23□□□□□ -2.37
RNU6-488P-201ENST00000515918 MAST4O15021 2626 aa0.23□□□□□ -2.37
RNU6-488P-201ENST00000515918 CACNA1AO00555 2505 aa0.23□□□□□ -2.37
RNU6-488P-201ENST00000515918 PTPN13Q12923 2485 aa0.23□□□□□ -2.37
RNU6-488P-201ENST00000515918 CCL22O00626 93 aa0.23□□□□□ -2.37
RNU6-488P-201ENST00000515918 COL14A1Q05707 1796 aaKnown RBP0.23□□□□□ -2.37
RNU6-488P-201ENST00000515918 POLR1AO95602 1720 aaPredicted RBP0.23□□□□□ -2.37
RNU6-488P-201ENST00000515918 ABCA2Q9BZC7 2435 aa0.23□□□□□ -2.37
RNU6-488P-201ENST00000515918 MYCBP2O75592 4640 aa0.22□□□□□ -2.37
RNU6-488P-201ENST00000515918 PREX1Q8TCU6 1659 aa0.22□□□□□ -2.37
RNU6-488P-201ENST00000515918 DEFB121Q5J5C9 76 aa0.22□□□□□ -2.37
RNU6-488P-201ENST00000515918 LPAP08519 4548 aa0.22□□□□□ -2.37
RNU6-488P-201ENST00000515918 PIK3C2BO00750 1634 aa0.22□□□□□ -2.37
RNU6-488P-201ENST00000515918 HMCN1Q96RW7 5635 aa0.21□□□□□ -2.38
RNU6-488P-201ENST00000515918 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
RNU6-488P-201ENST00000515918 BCORQ6W2J9 1755 aa0.2□□□□□ -2.38
RNU6-488P-201ENST00000515918 MAGI3Q5TCQ9 1506 aa0.2□□□□□ -2.38
RNU6-488P-201ENST00000515918 NDUFB1O75438 58 aa0.2□□□□□ -2.38
RNU6-488P-201ENST00000515918 HEPN1Q6WQI6 88 aa0.2□□□□□ -2.38
RNU6-488P-201ENST00000515918 ATRQ13535 2644 aa0.2□□□□□ -2.38
RNU6-488P-201ENST00000515918 UBR3Q6ZT12 1888 aa0.2□□□□□ -2.38
RNU6-488P-201ENST00000515918 RRBP1Q9P2E9 1410 aaKnown RBP0.2□□□□□ -2.38
RNU6-488P-201ENST00000515918 BSNQ9UPA5 3926 aa0.19□□□□□ -2.38
RNU6-488P-201ENST00000515918 CSPG4Q6UVK1 2322 aa0.19□□□□□ -2.38
RNU6-488P-201ENST00000515918 RPL38P63173 70 aaKnown RBP0.19□□□□□ -2.38
RNU6-488P-201ENST00000515918 CFAP74Q9C0B2 1584 aa0.19□□□□□ -2.38
RNU6-488P-201ENST00000515918 DOT1LQ8TEK3 1739 aa0.18□□□□□ -2.38
RNU6-488P-201ENST00000515918 ABCC1P33527 1531 aa0.18□□□□□ -2.38
RNU6-488P-201ENST00000515918 ALMS1Q8TCU4 4167 aa0.18□□□□□ -2.38
RNU6-488P-201ENST00000515918 IFI6P09912 130 aa0.18□□□□□ -2.38
RNU6-488P-201ENST00000515918 ATP5EP2Q5VTU8 51 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms