RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 SND1-IT1Q9HBX3 110 aa5.87□□□□□ -1.47
RNF4-221ENST00000513643 H0Y9J4 135 aa5.86□□□□□ -1.47
RNF4-221ENST00000513643 VPREB1P12018 145 aa5.86□□□□□ -1.47
RNF4-221ENST00000513643 PFN2P35080 140 aa5.86□□□□□ -1.47
RNF4-221ENST00000513643 UBE2BP63146 152 aa5.86□□□□□ -1.47
RNF4-221ENST00000513643 COA6Q5JTJ3 125 aaKnown RBP5.86□□□□□ -1.47
RNF4-221ENST00000513643 DIRC1Q969H9 104 aa5.86□□□□□ -1.47
RNF4-221ENST00000513643 HSPB8Q9UJY1 196 aa5.86□□□□□ -1.47
RNF4-221ENST00000513643 ZNF861PO60384 105 aa5.85□□□□□ -1.47
RNF4-221ENST00000513643 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
RNF4-221ENST00000513643 FABP4P15090 132 aa5.84□□□□□ -1.47
RNF4-221ENST00000513643 PLNP26678 52 aa5.84□□□□□ -1.47
RNF4-221ENST00000513643 TSPEAR-AS2P59090 65 aa5.84□□□□□ -1.47
RNF4-221ENST00000513643 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
RNF4-221ENST00000513643 LOC107984156A0A0G2JMH3 177 aa5.83□□□□□ -1.48
RNF4-221ENST00000513643 BCE1O60756 84 aa5.83□□□□□ -1.48
RNF4-221ENST00000513643 HERV-K104P63124 156 aa5.83□□□□□ -1.48
RNF4-221ENST00000513643 ARL17AQ8IVW1 177 aa5.83□□□□□ -1.48
RNF4-221ENST00000513643 RPL37AP8A6NKH3 93 aa5.82□□□□□ -1.48
RNF4-221ENST00000513643 LEPROTO15243 131 aa5.82□□□□□ -1.48
RNF4-221ENST00000513643 DPM2O94777 84 aa5.82□□□□□ -1.48
RNF4-221ENST00000513643 NDUFA12Q9UI09 145 aa5.82□□□□□ -1.48
RNF4-221ENST00000513643 SYS1-DBNDD2H3BUS1 97 aa5.81□□□□□ -1.48
RNF4-221ENST00000513643 IGKCP01834 107 aa5.81□□□□□ -1.48
RNF4-221ENST00000513643 SMIM13P0DJ93 91 aa5.81□□□□□ -1.48
RNF4-221ENST00000513643 RPL24P83731 157 aaKnown RBP5.81□□□□□ -1.48
RNF4-221ENST00000513643 PLEKHB2Q96CS7 222 aa5.81□□□□□ -1.48
RNF4-221ENST00000513643 PMCHL2Q9BQD1 86 aa5.81□□□□□ -1.48
RNF4-221ENST00000513643 MAP1LC3CQ9BXW4 147 aa5.81□□□□□ -1.48
RNF4-221ENST00000513643 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
RNF4-221ENST00000513643 GAGE10A6NGK3 116 aa5.8□□□□□ -1.48
RNF4-221ENST00000513643 LINC00587B1AMM8 73 aa5.8□□□□□ -1.48
RNF4-221ENST00000513643 H0Y8G0 127 aa5.8□□□□□ -1.48
RNF4-221ENST00000513643 LINC00158P58513 81 aa5.8□□□□□ -1.48
RNF4-221ENST00000513643 LINC01545Q5VT33 79 aa5.8□□□□□ -1.48
RNF4-221ENST00000513643 NKAPP1Q8N9T2 125 aa5.8□□□□□ -1.48
RNF4-221ENST00000513643 J3QQQ9 107 aa5.79□□□□□ -1.48
RNF4-221ENST00000513643 M0R378 163 aa5.79□□□□□ -1.48
RNF4-221ENST00000513643 RPL28P46779 137 aaKnown RBP5.79□□□□□ -1.48
RNF4-221ENST00000513643 NMUP48645 174 aa5.79□□□□□ -1.48
RNF4-221ENST00000513643 MIR7-3HGQ8N6C7 128 aa5.79□□□□□ -1.48
RNF4-221ENST00000513643 PRR26Q8N8Z3 221 aa5.79□□□□□ -1.48
RNF4-221ENST00000513643 A0A0U1RRA0 63 aa5.78□□□□□ -1.48
RNF4-221ENST00000513643 E9PLD3 99 aa5.78□□□□□ -1.48
RNF4-221ENST00000513643 PET117Q6UWS5 81 aa5.78□□□□□ -1.48
RNF4-221ENST00000513643 TMEM126AQ9H061 195 aa5.78□□□□□ -1.48
RNF4-221ENST00000513643 IGKV2-28A0A075B6P5 120 aa5.77□□□□□ -1.49
RNF4-221ENST00000513643 IGKV2D-26A0A0A0MRZ7 120 aa5.77□□□□□ -1.49
RNF4-221ENST00000513643 IGKV2D-28P01615 120 aa5.77□□□□□ -1.49
RNF4-221ENST00000513643 HERVK_113P61574 105 aa5.77□□□□□ -1.49
RNF4-221ENST00000513643 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
RNF4-221ENST00000513643 TMEM238C9JI98 176 aa5.76□□□□□ -1.49
RNF4-221ENST00000513643 KRTAP4-16G5E9R7 235 aaPredicted RBP5.76□□□□□ -1.49
RNF4-221ENST00000513643 C3orf79P0CE67 100 aa5.76□□□□□ -1.49
RNF4-221ENST00000513643 S100A1P23297 94 aa5.76□□□□□ -1.49
RNF4-221ENST00000513643 SPRR1AP35321 89 aa5.76□□□□□ -1.49
RNF4-221ENST00000513643 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
RNF4-221ENST00000513643 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
RNF4-221ENST00000513643 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
RNF4-221ENST00000513643 LPAP08519 4548 aa5.75□□□□□ -1.49
RNF4-221ENST00000513643 ADAMTSL4-AS1Q5T5F5 129 aa5.75□□□□□ -1.49
RNF4-221ENST00000513643 BOD1L2Q8IYS8 172 aa5.75□□□□□ -1.49
RNF4-221ENST00000513643 LITAFQ99732 161 aa5.75□□□□□ -1.49
RNF4-221ENST00000513643 A0A087X002 238 aa5.74□□□□□ -1.49
RNF4-221ENST00000513643 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
RNF4-221ENST00000513643 EIF4EBP3O60516 100 aaPredicted RBP5.74□□□□□ -1.49
RNF4-221ENST00000513643 LGALS3P17931 250 aaKnown RBP5.74□□□□□ -1.49
RNF4-221ENST00000513643 RPL13AP40429 203 aaKnown RBP5.74□□□□□ -1.49
RNF4-221ENST00000513643 SOSTDC1Q6X4U4 206 aa5.74□□□□□ -1.49
RNF4-221ENST00000513643 TRBV10-2A0A0K0K1G8 114 aa5.73□□□□□ -1.49
RNF4-221ENST00000513643 TMEM238LA0A1B0GVL6 79 aa5.73□□□□□ -1.49
RNF4-221ENST00000513643 LCE2BO14633 110 aa5.73□□□□□ -1.49
RNF4-221ENST00000513643 ATP6V1G1O75348 118 aa5.73□□□□□ -1.49
RNF4-221ENST00000513643 NDUFC2O95298 119 aa5.73□□□□□ -1.49
RNF4-221ENST00000513643 DAND5Q8N907 189 aa5.73□□□□□ -1.49
RNF4-221ENST00000513643 PRYO14603 147 aa5.72□□□□□ -1.49
RNF4-221ENST00000513643 TIMM17BO60830 172 aa5.72□□□□□ -1.49
RNF4-221ENST00000513643 UBE2AP49459 152 aa5.72□□□□□ -1.49
RNF4-221ENST00000513643 PRLHP81277 87 aa5.72□□□□□ -1.49
RNF4-221ENST00000513643 FAM229BQ4G0N7 80 aa5.72□□□□□ -1.49
RNF4-221ENST00000513643 LINC00337Q8N6G1 96 aa5.72□□□□□ -1.49
RNF4-221ENST00000513643 TRBV10-3A0A0K0K1G6 114 aa5.71□□□□□ -1.5
RNF4-221ENST00000513643 IGLV6-57P01721 117 aa5.71□□□□□ -1.5
RNF4-221ENST00000513643 CRYGAP11844 174 aa5.71□□□□□ -1.5
RNF4-221ENST00000513643 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.5
RNF4-221ENST00000513643 FAM19A1Q7Z5A9 133 aa5.71□□□□□ -1.5
RNF4-221ENST00000513643 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
RNF4-221ENST00000513643 NCR3O14931 201 aa5.7□□□□□ -1.5
RNF4-221ENST00000513643 HIST3H2BBQ8N257 126 aa5.7□□□□□ -1.5
RNF4-221ENST00000513643 SPANXB1Q9NS25 103 aaPredicted RBP5.7□□□□□ -1.5
RNF4-221ENST00000513643 KRTDAPP60985 99 aa5.69□□□□□ -1.5
RNF4-221ENST00000513643 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
RNF4-221ENST00000513643 B5MCH6 92 aa5.68□□□□□ -1.5
RNF4-221ENST00000513643 ANKRD39Q53RE8 183 aa5.68□□□□□ -1.5
RNF4-221ENST00000513643 LINC00308Q8TCZ7 52 aa5.68□□□□□ -1.5
RNF4-221ENST00000513643 SMCR5Q8TEV8 140 aa5.68□□□□□ -1.5
RNF4-221ENST00000513643 HIST1H2BLQ99880 126 aa5.68□□□□□ -1.5
RNF4-221ENST00000513643 PPDPFQ9H3Y8 114 aa5.68□□□□□ -1.5
RNF4-221ENST00000513643 ZNF815PA8K554 130 aa5.67□□□□□ -1.5
RNF4-221ENST00000513643 DDTP30046 118 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 269.2 ms