RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 TFF3Q07654 80 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 FXYD3Q14802 87 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 XAF1Q6GPH4 301 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 C5orf56Q8N8D9 126 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 LSM10Q969L4 123 aaKnown RBP0.8□□□□□ -2.28
OTUD4-207ENST00000509517 IFI27L1Q96BM0 104 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 CCL19Q99731 98 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 SEC11CQ9BY50 192 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 RERGLQ9H628 205 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 TMEM242Q9NWH2 141 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 DOCK11Q5JSL3 2073 aa0.8□□□□□ -2.28
OTUD4-207ENST00000509517 HRNRQ86YZ3 2850 aaPredicted RBP0.79□□□□□ -2.28
OTUD4-207ENST00000509517 APOC1P02654 83 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 IL5P05113 134 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 NPC2P61916 151 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 SLC48A1Q6P1K1 146 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 Q6ZQY7 126 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 NDUFA11Q86Y39 141 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 TSKUQ8WUA8 353 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 PP6455Q8WZ26 134 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 TMEM203Q969S6 136 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 LINC00208Q96KT6 92 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 SCN3BQ9NY72 215 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 DNAH7Q8WXX0 4024 aa0.79□□□□□ -2.28
OTUD4-207ENST00000509517 HUWE1Q7Z6Z7 4374 aaKnown RBP0.78□□□□□ -2.28
OTUD4-207ENST00000509517 USH2AO75445 5202 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 FAT1Q14517 4588 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 FAT3Q8TDW7 4589 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 NDUFB6O95139 128 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 IFNGP01579 166 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 AKAIN1P0CW23 69 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 PIPP12273 146 aaPredicted RBP0.78□□□□□ -2.28
OTUD4-207ENST00000509517 C9orf116Q5BN46 136 aaPredicted RBP0.78□□□□□ -2.28
OTUD4-207ENST00000509517 Q6AWC8 147 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 LINC00575Q6W349 94 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 SPTSSAQ969W0 71 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 TMEM141Q96I45 108 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 CGREF1Q99674 301 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 LINC00846Q9NV44 126 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 SERP1Q9Y6X1 66 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 U3KQA8 63 aa0.78□□□□□ -2.28
OTUD4-207ENST00000509517 DSTQ03001 7570 aaKnown RBP0.78□□□□□ -2.29
OTUD4-207ENST00000509517 FAT2Q9NYQ8 4349 aa0.78□□□□□ -2.29
OTUD4-207ENST00000509517 STARD9Q9P2P6 4700 aa0.77□□□□□ -2.29
OTUD4-207ENST00000509517 F6UZH7 168 aa0.77□□□□□ -2.29
OTUD4-207ENST00000509517 UBE2G1P62253 170 aa0.77□□□□□ -2.29
OTUD4-207ENST00000509517 Q5VSD8 79 aa0.77□□□□□ -2.29
OTUD4-207ENST00000509517 COPS9Q8WXC6 57 aa0.77□□□□□ -2.29
OTUD4-207ENST00000509517 NAA60Q9H7X0 242 aa0.77□□□□□ -2.29
OTUD4-207ENST00000509517 DNAH10Q8IVF4 4471 aa0.77□□□□□ -2.29
OTUD4-207ENST00000509517 PLECQ15149 4684 aaKnown RBP0.77□□□□□ -2.29
OTUD4-207ENST00000509517 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
OTUD4-207ENST00000509517 TRAV12-3A0A0B4J271 114 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 TRBV30A0A0K0K1B3 111 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 TEX49A0A1B0GTD5 131 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 MCRIP1C9JLW8 97 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 CORTO00230 105 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 SNCGO76070 127 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 CAV3P56539 151 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 UBA52P62987 128 aaKnown RBP0.76□□□□□ -2.29
OTUD4-207ENST00000509517 Q56UQ5 140 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 S100A7L2Q5SY68 101 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 Q86TA4 180 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 Q8N8P6 123 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 C10orf82Q8WW14 230 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 GNG8Q9UK08 70 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 LRP1BQ9NZR2 4599 aa0.76□□□□□ -2.29
OTUD4-207ENST00000509517 TCRBV3S1A0A5B6 114 aa0.75□□□□□ -2.29
OTUD4-207ENST00000509517 MIF4GDA9UHW6 222 aaKnown RBP0.75□□□□□ -2.29
OTUD4-207ENST00000509517 CBLN1P23435 193 aa0.75□□□□□ -2.29
OTUD4-207ENST00000509517 S100PP25815 95 aa0.75□□□□□ -2.29
OTUD4-207ENST00000509517 INSL4Q14641 139 aa0.75□□□□□ -2.29
OTUD4-207ENST00000509517 ZNF56Q15929 161 aa0.75□□□□□ -2.29
OTUD4-207ENST00000509517 C10orf99Q6UWK7 81 aa0.75□□□□□ -2.29
OTUD4-207ENST00000509517 Q8N6K4 173 aa0.75□□□□□ -2.29
OTUD4-207ENST00000509517 APOBP04114 4563 aaKnown RBP0.75□□□□□ -2.29
OTUD4-207ENST00000509517 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 ELOF1P60002 83 aaKnown RBP0.74□□□□□ -2.29
OTUD4-207ENST00000509517 KLKP1Q107X0 134 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 WHAMMP3Q1A5X7 153 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 RPL7L1Q6DKI1 246 aaKnown RBP0.74□□□□□ -2.29
OTUD4-207ENST00000509517 CYP2G1PQ6ZSU1 146 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 SPTSSBQ8NFR3 76 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 DEFB104AQ8WTQ1 72 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 RPRMQ9NS64 109 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 PKHD1L1Q86WI1 4243 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 MUC12Q9UKN1 5478 aa0.74□□□□□ -2.29
OTUD4-207ENST00000509517 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.73□□□□□ -2.29
OTUD4-207ENST00000509517 A0A096LNT2 108 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 TRBV10-3A0A0K0K1G6 114 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 A0A1W2PPM0 123 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 CLPSL1A2RUU4 121 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 A6NIN4 97 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 APOC4-APOC2K7ER74 178 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 FXYD1O00168 92 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 SNAPC5O75971 98 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 TNFP01375 233 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 APOC2P02655 101 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 CCL3L1P16619 93 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 S100A1P23297 94 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms