RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 GAFA1Q96PS6 74 aa1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 KMT2BQ9UMN6 2715 aaPredicted RBP1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 KIAA0556O60303 1618 aa1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 ABCA5Q8WWZ7 1642 aa1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 POLR1AO95602 1720 aaPredicted RBP1.94□□□□□ -2.1
SMARCA5-202ENST00000508573 BRD3OSQ6XYD6 125 aa1.94□□□□□ -2.1
SMARCA5-202ENST00000508573 F5P12259 2224 aa1.94□□□□□ -2.1
SMARCA5-202ENST00000508573 ENHOQ6UWT2 76 aa1.93□□□□□ -2.1
SMARCA5-202ENST00000508573 DOT1LQ8TEK3 1739 aa1.92□□□□□ -2.1
SMARCA5-202ENST00000508573 HAMPP81172 84 aa1.92□□□□□ -2.1
SMARCA5-202ENST00000508573 NCBP2-AS2Q69YL0 99 aa1.92□□□□□ -2.1
SMARCA5-202ENST00000508573 EFCAB6Q5THR3 1501 aa1.91□□□□□ -2.1
SMARCA5-202ENST00000508573 PRB1P04280 392 aa1.91□□□□□ -2.1
SMARCA5-202ENST00000508573 PCOTHQ58A44 107 aa1.91□□□□□ -2.1
SMARCA5-202ENST00000508573 CACNA1CQ13936 2221 aa1.91□□□□□ -2.1
SMARCA5-202ENST00000508573 TRIOBPQ9H2D6 2365 aa1.91□□□□□ -2.1
SMARCA5-202ENST00000508573 K7EMI3 77 aa1.9□□□□□ -2.11
SMARCA5-202ENST00000508573 NCR3O14931 201 aa1.9□□□□□ -2.11
SMARCA5-202ENST00000508573 KRTAP10-10P60014 251 aa1.9□□□□□ -2.11
SMARCA5-202ENST00000508573 LINC00575Q6W349 94 aa1.9□□□□□ -2.11
SMARCA5-202ENST00000508573 SSBP3-AS1Q7Z2R9 100 aa1.9□□□□□ -2.11
SMARCA5-202ENST00000508573 LY75O60449 1722 aa1.9□□□□□ -2.11
SMARCA5-202ENST00000508573 ERCC6L2Q5T890 1561 aa1.89□□□□□ -2.11
SMARCA5-202ENST00000508573 C3P01024 1663 aa1.88□□□□□ -2.11
SMARCA5-202ENST00000508573 COX7BP24311 80 aa1.88□□□□□ -2.11
SMARCA5-202ENST00000508573 FCER1GP30273 86 aa1.88□□□□□ -2.11
SMARCA5-202ENST00000508573 RPL37P61927 97 aaKnown RBP1.88□□□□□ -2.11
SMARCA5-202ENST00000508573 NDUFA4O00483 81 aa1.87□□□□□ -2.11
SMARCA5-202ENST00000508573 CACNA1BQ00975 2339 aa1.87□□□□□ -2.11
SMARCA5-202ENST00000508573 TJP1Q07157 1748 aa1.87□□□□□ -2.11
SMARCA5-202ENST00000508573 SPINK13Q1W4C9 94 aa1.87□□□□□ -2.11
SMARCA5-202ENST00000508573 CADP27708 2225 aa1.87□□□□□ -2.11
SMARCA5-202ENST00000508573 ADCY10Q96PN6 1610 aa1.87□□□□□ -2.11
SMARCA5-202ENST00000508573 A0A0G2JMZ2 1700 aa1.86□□□□□ -2.11
SMARCA5-202ENST00000508573 ASCC3Q8N3C0 2202 aaKnown RBP1.86□□□□□ -2.11
SMARCA5-202ENST00000508573 UBL5Q9BZL1 73 aa1.86□□□□□ -2.11
SMARCA5-202ENST00000508573 KIAA0586Q9BVV6 1533 aa1.86□□□□□ -2.11
SMARCA5-202ENST00000508573 PIN1P1O15428 100 aa1.85□□□□□ -2.11
SMARCA5-202ENST00000508573 QSER1Q2KHR3 1735 aa1.84□□□□□ -2.11
SMARCA5-202ENST00000508573 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
SMARCA5-202ENST00000508573 AGLP35573 1532 aa1.84□□□□□ -2.11
SMARCA5-202ENST00000508573 TULP4Q9NRJ4 1543 aa1.84□□□□□ -2.11
SMARCA5-202ENST00000508573 ANKRD17O75179 2603 aaKnown RBP1.84□□□□□ -2.12
SMARCA5-202ENST00000508573 NRXN3Q9Y4C0 1643 aa1.84□□□□□ -2.12
SMARCA5-202ENST00000508573 ANKRD36CQ5JPF3 1778 aa1.83□□□□□ -2.12
SMARCA5-202ENST00000508573 TOMM5Q8N4H5 51 aa1.83□□□□□ -2.12
SMARCA5-202ENST00000508573 ASXL3Q9C0F0 2248 aa1.83□□□□□ -2.12
SMARCA5-202ENST00000508573 BAHCC1Q9P281 2608 aa1.83□□□□□ -2.12
SMARCA5-202ENST00000508573 PLXNB2O15031 1838 aa1.82□□□□□ -2.12
SMARCA5-202ENST00000508573 IQGAP2Q13576 1575 aa1.82□□□□□ -2.12
SMARCA5-202ENST00000508573 PRH1P02810 166 aa1.82□□□□□ -2.12
SMARCA5-202ENST00000508573 LRRC37AA6NMS7 1700 aa1.82□□□□□ -2.12
SMARCA5-202ENST00000508573 NWD1Q149M9 1564 aa1.81□□□□□ -2.12
SMARCA5-202ENST00000508573 CPSF4LA6NMK7 179 aaKnown RBP1.8□□□□□ -2.12
SMARCA5-202ENST00000508573 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
SMARCA5-202ENST00000508573 CMC2Q9NRP2 79 aa1.8□□□□□ -2.12
SMARCA5-202ENST00000508573 ABCC8Q09428 1581 aa1.8□□□□□ -2.12
SMARCA5-202ENST00000508573 UBE2DNLQ8IWF7 75 aa1.79□□□□□ -2.12
SMARCA5-202ENST00000508573 NMES1Q9C002 83 aa1.79□□□□□ -2.12
SMARCA5-202ENST00000508573 KCNQ1DNQ9H478 68 aa1.79□□□□□ -2.12
SMARCA5-202ENST00000508573 TECTAO75443 2155 aa1.78□□□□□ -2.12
SMARCA5-202ENST00000508573 DDX60LQ5H9U9 1706 aaKnown RBP1.78□□□□□ -2.12
SMARCA5-202ENST00000508573 M0R1W7 72 aa1.78□□□□□ -2.12
SMARCA5-202ENST00000508573 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
SMARCA5-202ENST00000508573 FAM208AQ9UK61 1670 aaKnown RBP1.77□□□□□ -2.13
SMARCA5-202ENST00000508573 IGIPA6NJ69 53 aa1.77□□□□□ -2.13
SMARCA5-202ENST00000508573 DEFB114Q30KQ6 69 aa1.77□□□□□ -2.13
SMARCA5-202ENST00000508573 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
SMARCA5-202ENST00000508573 SPTY2D1-AS1A0A0U1RR47 76 aa1.76□□□□□ -2.13
SMARCA5-202ENST00000508573 K7EIL1 84 aa1.76□□□□□ -2.13
SMARCA5-202ENST00000508573 CRIPTQ9P021 101 aa1.76□□□□□ -2.13
SMARCA5-202ENST00000508573 ZDBF2Q9HCK1 2354 aa1.76□□□□□ -2.13
SMARCA5-202ENST00000508573 ETDCA0A1B0GVM5 59 aa1.75□□□□□ -2.13
SMARCA5-202ENST00000508573 I3L3M4 83 aa1.75□□□□□ -2.13
SMARCA5-202ENST00000508573 ANGP03950 147 aaKnown RBP1.75□□□□□ -2.13
SMARCA5-202ENST00000508573 RPL38P63173 70 aaKnown RBP1.75□□□□□ -2.13
SMARCA5-202ENST00000508573 ABRACLQ9P1F3 81 aa1.75□□□□□ -2.13
SMARCA5-202ENST00000508573 HIVEP2P31629 2446 aa1.75□□□□□ -2.13
SMARCA5-202ENST00000508573 FLG2Q5D862 2391 aaPredicted RBP1.74□□□□□ -2.13
SMARCA5-202ENST00000508573 TNCP24821 2201 aa1.74□□□□□ -2.13
SMARCA5-202ENST00000508573 PLNP26678 52 aa1.74□□□□□ -2.13
SMARCA5-202ENST00000508573 KNTC1P50748 2209 aa1.74□□□□□ -2.13
SMARCA5-202ENST00000508573 TRPM2O94759 1503 aa1.73□□□□□ -2.13
SMARCA5-202ENST00000508573 I3L2K1 104 aa1.73□□□□□ -2.13
SMARCA5-202ENST00000508573 COX6B1P14854 86 aa1.73□□□□□ -2.13
SMARCA5-202ENST00000508573 SMIM27A0A1W2PRY6 76 aa1.72□□□□□ -2.13
SMARCA5-202ENST00000508573 URB1O60287 2271 aaKnown RBP1.71□□□□□ -2.14
SMARCA5-202ENST00000508573 LYNX1P0DP58 116 aa1.7□□□□□ -2.14
SMARCA5-202ENST00000508573 SERF2P84101 59 aa1.7□□□□□ -2.14
SMARCA5-202ENST00000508573 TP53AIP1Q9HCN2 124 aa1.7□□□□□ -2.14
SMARCA5-202ENST00000508573 DEPDC5O75140 1603 aa1.69□□□□□ -2.14
SMARCA5-202ENST00000508573 CNTRLQ7Z7A1 2325 aa1.69□□□□□ -2.14
SMARCA5-202ENST00000508573 DEFB131BA0A096LNP1 70 aa1.69□□□□□ -2.14
SMARCA5-202ENST00000508573 CRIP1P50238 77 aa1.69□□□□□ -2.14
SMARCA5-202ENST00000508573 JMJD1CQ15652 2540 aa1.69□□□□□ -2.14
SMARCA5-202ENST00000508573 TOGARAM1Q9Y4F4 1720 aa1.69□□□□□ -2.14
SMARCA5-202ENST00000508573 TNRC6CQ9HCJ0 1690 aaKnown RBP1.68□□□□□ -2.14
SMARCA5-202ENST00000508573 K7EQZ3 153 aa1.68□□□□□ -2.14
SMARCA5-202ENST00000508573 DEFB123Q8N688 67 aa1.68□□□□□ -2.14
SMARCA5-202ENST00000508573 GOLGA4Q13439 2230 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 1347.9 ms