RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CD163L1Q9NR16 1453 aa1.19□□□□□ -2.22
HMGB1P22-201ENST00000505315 PAPPAQ13219 1627 aa1.19□□□□□ -2.22
HMGB1P22-201ENST00000505315 GOLGA4Q13439 2230 aaKnown RBP1.19□□□□□ -2.22
HMGB1P22-201ENST00000505315 K7EQZ3 153 aa1.19□□□□□ -2.22
HMGB1P22-201ENST00000505315 UBL5Q9BZL1 73 aa1.19□□□□□ -2.22
HMGB1P22-201ENST00000505315 ANKRD36A6QL64 1941 aa1.19□□□□□ -2.22
HMGB1P22-201ENST00000505315 PLXNB2O15031 1838 aa1.18□□□□□ -2.22
HMGB1P22-201ENST00000505315 LINC01549A6NIU2 74 aa1.18□□□□□ -2.22
HMGB1P22-201ENST00000505315 COX6B1P14854 86 aa1.18□□□□□ -2.22
HMGB1P22-201ENST00000505315 DEFB123Q8N688 67 aa1.18□□□□□ -2.22
HMGB1P22-201ENST00000505315 ARFGEF2Q9Y6D5 1785 aa1.18□□□□□ -2.22
HMGB1P22-201ENST00000505315 LAMC1P11047 1609 aa1.18□□□□□ -2.22
HMGB1P22-201ENST00000505315 ABCA9Q8IUA7 1624 aa1.18□□□□□ -2.22
HMGB1P22-201ENST00000505315 UBR3Q6ZT12 1888 aa1.18□□□□□ -2.22
HMGB1P22-201ENST00000505315 DIP2AQ14689 1571 aa1.17□□□□□ -2.22
HMGB1P22-201ENST00000505315 MRPL34Q9BQ48 92 aaKnown RBP1.17□□□□□ -2.22
HMGB1P22-201ENST00000505315 ZNF831Q5JPB2 1677 aa1.16□□□□□ -2.22
HMGB1P22-201ENST00000505315 ZFHX3Q15911 3703 aa1.16□□□□□ -2.22
HMGB1P22-201ENST00000505315 CCDC180Q9P1Z9 1646 aa1.16□□□□□ -2.22
HMGB1P22-201ENST00000505315 AHCTF1Q8WYP5 2266 aa1.16□□□□□ -2.22
HMGB1P22-201ENST00000505315 LCE6AA0A183 80 aa1.16□□□□□ -2.22
HMGB1P22-201ENST00000505315 RALGAPBQ86X10 1494 aa1.16□□□□□ -2.22
HMGB1P22-201ENST00000505315 FAM208BQ5VWN6 2430 aa1.16□□□□□ -2.22
HMGB1P22-201ENST00000505315 EEA1Q15075 1411 aa1.15□□□□□ -2.22
HMGB1P22-201ENST00000505315 CCL22O00626 93 aa1.15□□□□□ -2.23
HMGB1P22-201ENST00000505315 FCER1GP30273 86 aa1.15□□□□□ -2.23
HMGB1P22-201ENST00000505315 APLNQ9ULZ1 77 aa1.15□□□□□ -2.23
HMGB1P22-201ENST00000505315 FMN2Q9NZ56 1722 aa1.15□□□□□ -2.23
HMGB1P22-201ENST00000505315 TIAM2Q8IVF5 1701 aa1.14□□□□□ -2.23
HMGB1P22-201ENST00000505315 CFAP43Q8NDM7 1665 aa1.13□□□□□ -2.23
HMGB1P22-201ENST00000505315 MRPL33O75394 65 aaKnown RBP1.13□□□□□ -2.23
HMGB1P22-201ENST00000505315 POLR1AO95602 1720 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P22-201ENST00000505315 ITSN1Q15811 1721 aa1.12□□□□□ -2.23
HMGB1P22-201ENST00000505315 KRTAP5-5Q701N2 237 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P22-201ENST00000505315 PLCH1Q4KWH8 1693 aa1.12□□□□□ -2.23
HMGB1P22-201ENST00000505315 TIAM1Q13009 1591 aa1.12□□□□□ -2.23
HMGB1P22-201ENST00000505315 RICTORQ6R327 1708 aa1.12□□□□□ -2.23
HMGB1P22-201ENST00000505315 ANKRD17O75179 2603 aaKnown RBP1.11□□□□□ -2.23
HMGB1P22-201ENST00000505315 OTOGLQ3ZCN5 2332 aa1.1□□□□□ -2.23
HMGB1P22-201ENST00000505315 DOT1LQ8TEK3 1739 aa1.1□□□□□ -2.23
HMGB1P22-201ENST00000505315 SPRR1BP22528 89 aa1.1□□□□□ -2.23
HMGB1P22-201ENST00000505315 DEFB105AQ8NG35 78 aa1.1□□□□□ -2.23
HMGB1P22-201ENST00000505315 URB1O60287 2271 aaKnown RBP1.1□□□□□ -2.23
HMGB1P22-201ENST00000505315 CACNA1EQ15878 2313 aa1.1□□□□□ -2.23
HMGB1P22-201ENST00000505315 QSER1Q2KHR3 1735 aa1.09□□□□□ -2.23
HMGB1P22-201ENST00000505315 NWD1Q149M9 1564 aa1.09□□□□□ -2.23
HMGB1P22-201ENST00000505315 COL14A1Q05707 1796 aaKnown RBP1.09□□□□□ -2.23
HMGB1P22-201ENST00000505315 EIF2AK4Q9P2K8 1649 aaKnown RBP1.09□□□□□ -2.23
HMGB1P22-201ENST00000505315 ETDCA0A1B0GVM5 59 aa1.09□□□□□ -2.23
HMGB1P22-201ENST00000505315 SPRR1AP35321 89 aa1.09□□□□□ -2.23
HMGB1P22-201ENST00000505315 Q5VSD8 79 aa1.09□□□□□ -2.23
HMGB1P22-201ENST00000505315 CDKN2A-AS1Q9UH64 79 aa1.09□□□□□ -2.23
HMGB1P22-201ENST00000505315 NHSQ6T4R5 1651 aa1.09□□□□□ -2.24
HMGB1P22-201ENST00000505315 HELZ2Q9BYK8 2649 aaKnown RBP1.09□□□□□ -2.24
HMGB1P22-201ENST00000505315 MUC6Q6W4X9 2439 aa1.08□□□□□ -2.24
HMGB1P22-201ENST00000505315 WIZO95785 1651 aa1.08□□□□□ -2.24
HMGB1P22-201ENST00000505315 PREX1Q8TCU6 1659 aa1.08□□□□□ -2.24
HMGB1P22-201ENST00000505315 PRXQ9BXM0 1461 aa1.08□□□□□ -2.24
HMGB1P22-201ENST00000505315 NDUFA3O95167 84 aa1.08□□□□□ -2.24
HMGB1P22-201ENST00000505315 CPS1P31327 1500 aa1.08□□□□□ -2.24
HMGB1P22-201ENST00000505315 CICQ96RK0 1608 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P22-201ENST00000505315 BCORQ6W2J9 1755 aa1.07□□□□□ -2.24
HMGB1P22-201ENST00000505315 H1FX-AS1Q4G0G2 97 aa1.07□□□□□ -2.24
HMGB1P22-201ENST00000505315 KCNQ1DNQ9H478 68 aa1.07□□□□□ -2.24
HMGB1P22-201ENST00000505315 THOC2Q8NI27 1593 aaKnown RBP1.06□□□□□ -2.24
HMGB1P22-201ENST00000505315 ZNF462Q96JM2 2506 aa1.06□□□□□ -2.24
HMGB1P22-201ENST00000505315 PRB3Q04118 309 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P22-201ENST00000505315 KLK9Q2XQG4 91 aa1.06□□□□□ -2.24
HMGB1P22-201ENST00000505315 NCBP2-AS2Q69YL0 99 aa1.06□□□□□ -2.24
HMGB1P22-201ENST00000505315 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
HMGB1P22-201ENST00000505315 COX6B2Q6YFQ2 88 aa1.06□□□□□ -2.24
HMGB1P22-201ENST00000505315 PRO3102Q9H379 93 aa1.06□□□□□ -2.24
HMGB1P22-201ENST00000505315 PLXNC1O60486 1568 aa1.05□□□□□ -2.24
HMGB1P22-201ENST00000505315 BIVM-ERCC5R4GMW8 1640 aa1.05□□□□□ -2.24
HMGB1P22-201ENST00000505315 DEFB131BA0A096LNP1 70 aa1.05□□□□□ -2.24
HMGB1P22-201ENST00000505315 SPINK4O60575 86 aa1.05□□□□□ -2.24
HMGB1P22-201ENST00000505315 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
HMGB1P22-201ENST00000505315 LCE1BQ5T7P3 118 aa1.05□□□□□ -2.24
HMGB1P22-201ENST00000505315 NMES1Q9C002 83 aa1.05□□□□□ -2.24
HMGB1P22-201ENST00000505315 NOTCH2Q04721 2471 aa1.05□□□□□ -2.24
HMGB1P22-201ENST00000505315 ABCA6Q8N139 1617 aa1.04□□□□□ -2.24
HMGB1P22-201ENST00000505315 NRAPQ86VF7 1730 aa1.04□□□□□ -2.24
HMGB1P22-201ENST00000505315 LINC00158P58513 81 aa1.04□□□□□ -2.24
HMGB1P22-201ENST00000505315 SERF2P84101 59 aa1.04□□□□□ -2.24
HMGB1P22-201ENST00000505315 DOPEY2Q9Y3R5 2298 aa1.04□□□□□ -2.24
HMGB1P22-201ENST00000505315 ABCA10Q8WWZ4 1543 aa1.04□□□□□ -2.24
HMGB1P22-201ENST00000505315 PLCE1Q9P212 2302 aa1.03□□□□□ -2.24
HMGB1P22-201ENST00000505315 M0R1W7 72 aa1.03□□□□□ -2.24
HMGB1P22-201ENST00000505315 DEFB114Q30KQ6 69 aa1.03□□□□□ -2.24
HMGB1P22-201ENST00000505315 DEFB109BQ30KR1 87 aa1.03□□□□□ -2.24
HMGB1P22-201ENST00000505315 LELP1Q5T871 98 aa1.03□□□□□ -2.24
HMGB1P22-201ENST00000505315 WFDC13Q8IUB5 93 aa1.03□□□□□ -2.24
HMGB1P22-201ENST00000505315 NESP48681 1621 aa1.03□□□□□ -2.24
HMGB1P22-201ENST00000505315 PARP4Q9UKK3 1724 aaKnown RBP1.03□□□□□ -2.24
HMGB1P22-201ENST00000505315 TSC2P49815 1807 aa1.03□□□□□ -2.25
HMGB1P22-201ENST00000505315 SPTBN2O15020 2390 aa1.03□□□□□ -2.25
HMGB1P22-201ENST00000505315 CACNA1HO95180 2353 aa1.02□□□□□ -2.25
HMGB1P22-201ENST00000505315 SPINK6Q6UWN8 80 aa1.02□□□□□ -2.25
HMGB1P22-201ENST00000505315 TTC28Q96AY4 2481 aa1.02□□□□□ -2.25
HMGB1P22-201ENST00000505315 TNRC6CQ9HCJ0 1690 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms