RNA–Protein interactions for RNA: ENST00000504394.1

AC002460.1-201, humanhuman

TSL 3 BASIC

Gene AC002460.1, Length 370 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002460.1-201ENST00000504394 LINC00959A0A1B0GUT2 108 aa1.3□□□□□ -2.2
AC002460.1-201ENST00000504394 SMIM31A0A1B0GVY4 71 aa1.3□□□□□ -2.2
AC002460.1-201ENST00000504394 NDUFB1O75438 58 aa1.3□□□□□ -2.2
AC002460.1-201ENST00000504394 CNFNQ9BYD5 112 aa1.3□□□□□ -2.2
AC002460.1-201ENST00000504394 HELZ2Q9BYK8 2649 aaKnown RBP1.3□□□□□ -2.2
AC002460.1-201ENST00000504394 DUOX2Q9NRD8 1548 aa1.3□□□□□ -2.2
AC002460.1-201ENST00000504394 CCDC180Q9P1Z9 1646 aa1.29□□□□□ -2.2
AC002460.1-201ENST00000504394 PIGYQ3MUY2 71 aa1.29□□□□□ -2.2
AC002460.1-201ENST00000504394 WFDC9Q8NEX5 89 aa1.29□□□□□ -2.2
AC002460.1-201ENST00000504394 FAM103A1Q9BTL3 118 aaKnown RBP1.29□□□□□ -2.2
AC002460.1-201ENST00000504394 OTOGLQ3ZCN5 2332 aa1.29□□□□□ -2.2
AC002460.1-201ENST00000504394 DDX60LQ5H9U9 1706 aaKnown RBP1.28□□□□□ -2.2
AC002460.1-201ENST00000504394 RICTORQ6R327 1708 aa1.28□□□□□ -2.2
AC002460.1-201ENST00000504394 IFI27P40305 119 aaPredicted RBP1.27□□□□□ -2.21
AC002460.1-201ENST00000504394 GAFA1Q96PS6 74 aa1.27□□□□□ -2.21
AC002460.1-201ENST00000504394 PRO0255Q9UI72 69 aa1.27□□□□□ -2.21
AC002460.1-201ENST00000504394 NRAPQ86VF7 1730 aa1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 ABCA9Q8IUA7 1624 aa1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 SLIT1O75093 1534 aa1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 TRAV21A0A0B4J279 112 aa1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 ZNF462Q96JM2 2506 aa1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 NHSQ6T4R5 1651 aa1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 MADDQ8WXG6 1647 aa1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 EIF2AK4Q9P2K8 1649 aaKnown RBP1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 BIVM-ERCC5R4GMW8 1640 aa1.26□□□□□ -2.21
AC002460.1-201ENST00000504394 HEPN1Q6WQI6 88 aa1.25□□□□□ -2.21
AC002460.1-201ENST00000504394 EFCAB5A4FU69 1503 aa1.25□□□□□ -2.21
AC002460.1-201ENST00000504394 USF3Q68DE3 2245 aa1.24□□□□□ -2.21
AC002460.1-201ENST00000504394 PREX1Q8TCU6 1659 aa1.24□□□□□ -2.21
AC002460.1-201ENST00000504394 FXYD6-FXYD2A0A087WZ82 144 aa1.24□□□□□ -2.21
AC002460.1-201ENST00000504394 I3L2K1 104 aa1.24□□□□□ -2.21
AC002460.1-201ENST00000504394 USP32Q8NFA0 1604 aa1.24□□□□□ -2.21
AC002460.1-201ENST00000504394 ANKRD17O75179 2603 aaKnown RBP1.24□□□□□ -2.21
AC002460.1-201ENST00000504394 NESP48681 1621 aa1.23□□□□□ -2.21
AC002460.1-201ENST00000504394 SPTY2D1-AS1A0A0U1RR47 76 aa1.23□□□□□ -2.21
AC002460.1-201ENST00000504394 RPL38P63173 70 aaKnown RBP1.23□□□□□ -2.21
AC002460.1-201ENST00000504394 USMG5Q96IX5 58 aa1.23□□□□□ -2.21
AC002460.1-201ENST00000504394 KRTAP4-1Q9BYQ7 146 aa1.23□□□□□ -2.21
AC002460.1-201ENST00000504394 H3BVH4 76 aa1.22□□□□□ -2.21
AC002460.1-201ENST00000504394 COX7BP24311 80 aa1.22□□□□□ -2.21
AC002460.1-201ENST00000504394 Q5BKY6 102 aa1.22□□□□□ -2.21
AC002460.1-201ENST00000504394 Q8IZM0 81 aa1.22□□□□□ -2.21
AC002460.1-201ENST00000504394 NWD1Q149M9 1564 aa1.21□□□□□ -2.22
AC002460.1-201ENST00000504394 CDC42BPGQ6DT37 1551 aa1.21□□□□□ -2.22
AC002460.1-201ENST00000504394 IFI6P09912 130 aa1.21□□□□□ -2.22
AC002460.1-201ENST00000504394 CRIPTQ9P021 101 aa1.21□□□□□ -2.22
AC002460.1-201ENST00000504394 CACNA1HO95180 2353 aa1.21□□□□□ -2.22
AC002460.1-201ENST00000504394 TJP1Q07157 1748 aa1.2□□□□□ -2.22
AC002460.1-201ENST00000504394 LMTK2Q8IWU2 1503 aa1.2□□□□□ -2.22
AC002460.1-201ENST00000504394 ASXL1Q8IXJ9 1541 aa1.2□□□□□ -2.22
AC002460.1-201ENST00000504394 TNRC6CQ9HCJ0 1690 aaKnown RBP1.2□□□□□ -2.22
AC002460.1-201ENST00000504394 CD163L1Q9NR16 1453 aa1.2□□□□□ -2.22
AC002460.1-201ENST00000504394 DEFB123Q8N688 67 aa1.2□□□□□ -2.22
AC002460.1-201ENST00000504394 NREPQ16612 68 aa1.19□□□□□ -2.22
AC002460.1-201ENST00000504394 PTPRQQ9UMZ3 2332 aa1.19□□□□□ -2.22
AC002460.1-201ENST00000504394 C2CD3Q4AC94 2353 aa1.18□□□□□ -2.22
AC002460.1-201ENST00000504394 I3L3M4 83 aa1.18□□□□□ -2.22
AC002460.1-201ENST00000504394 COX8AP10176 69 aa1.18□□□□□ -2.22
AC002460.1-201ENST00000504394 PTPRZ1P23471 2315 aaPredicted RBP1.18□□□□□ -2.22
AC002460.1-201ENST00000504394 TIAM1Q13009 1591 aa1.17□□□□□ -2.22
AC002460.1-201ENST00000504394 HFM1A2PYH4 1435 aa1.17□□□□□ -2.22
AC002460.1-201ENST00000504394 ANKRD50Q9ULJ7 1429 aa1.17□□□□□ -2.22
AC002460.1-201ENST00000504394 K7EQZ3 153 aa1.17□□□□□ -2.22
AC002460.1-201ENST00000504394 CACNA1EQ15878 2313 aa1.16□□□□□ -2.22
AC002460.1-201ENST00000504394 GNG13Q9P2W3 67 aa1.16□□□□□ -2.22
AC002460.1-201ENST00000504394 HILPDAQ9Y5L2 63 aa1.16□□□□□ -2.22
AC002460.1-201ENST00000504394 COX6B1P14854 86 aa1.15□□□□□ -2.23
AC002460.1-201ENST00000504394 TNCP24821 2201 aa1.15□□□□□ -2.23
AC002460.1-201ENST00000504394 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
AC002460.1-201ENST00000504394 CPSF4LA6NMK7 179 aaKnown RBP1.14□□□□□ -2.23
AC002460.1-201ENST00000504394 HMGA1P17096 107 aaKnown RBP1.14□□□□□ -2.23
AC002460.1-201ENST00000504394 ATXN8Q156A1 80 aa1.14□□□□□ -2.23
AC002460.1-201ENST00000504394 C4AP0C0L4 1744 aa1.14□□□□□ -2.23
AC002460.1-201ENST00000504394 C4BP0C0L5 1744 aa1.14□□□□□ -2.23
AC002460.1-201ENST00000504394 CNOT1A5YKK6 2376 aaKnown RBP1.13□□□□□ -2.23
AC002460.1-201ENST00000504394 A0A087WWC5 75 aa1.13□□□□□ -2.23
AC002460.1-201ENST00000504394 S100ZQ8WXG8 99 aa1.13□□□□□ -2.23
AC002460.1-201ENST00000504394 FBN3Q75N90 2809 aa1.12□□□□□ -2.23
AC002460.1-201ENST00000504394 TTC28Q96AY4 2481 aa1.12□□□□□ -2.23
AC002460.1-201ENST00000504394 LCE6AA0A183 80 aa1.12□□□□□ -2.23
AC002460.1-201ENST00000504394 PRB3Q04118 309 aaPredicted RBP1.12□□□□□ -2.23
AC002460.1-201ENST00000504394 DIP2AQ14689 1571 aa1.12□□□□□ -2.23
AC002460.1-201ENST00000504394 SPTBN2O15020 2390 aa1.12□□□□□ -2.23
AC002460.1-201ENST00000504394 F8P00451 2351 aa1.11□□□□□ -2.23
AC002460.1-201ENST00000504394 MEGF8Q7Z7M0 2845 aa1.11□□□□□ -2.23
AC002460.1-201ENST00000504394 NDUFA4O00483 81 aa1.11□□□□□ -2.23
AC002460.1-201ENST00000504394 PIEZO2Q9H5I5 2752 aa1.11□□□□□ -2.23
AC002460.1-201ENST00000504394 ABCA6Q8N139 1617 aa1.11□□□□□ -2.23
AC002460.1-201ENST00000504394 Q5VSD8 79 aa1.1□□□□□ -2.23
AC002460.1-201ENST00000504394 MRPL34Q9BQ48 92 aaKnown RBP1.1□□□□□ -2.23
AC002460.1-201ENST00000504394 RALGAPBQ86X10 1494 aa1.1□□□□□ -2.23
AC002460.1-201ENST00000504394 CCL22O00626 93 aa1.09□□□□□ -2.23
AC002460.1-201ENST00000504394 C3P01024 1663 aa1.08□□□□□ -2.24
AC002460.1-201ENST00000504394 ZNF292O60281 2723 aa1.08□□□□□ -2.24
AC002460.1-201ENST00000504394 POLQO75417 2590 aa1.07□□□□□ -2.24
AC002460.1-201ENST00000504394 CROCC2H7BZ55 1655 aa1.07□□□□□ -2.24
AC002460.1-201ENST00000504394 CELSR2Q9HCU4 2923 aa1.07□□□□□ -2.24
AC002460.1-201ENST00000504394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.07□□□□□ -2.24
AC002460.1-201ENST00000504394 RNF17Q9BXT8 1623 aaKnown RBP1.07□□□□□ -2.24
AC002460.1-201ENST00000504394 LY75O60449 1722 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms