RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 NANOS2P60321 138 aaKnown RBP11.98□□□□□ -0.49
HMGXB3-201ENST00000502717 MKI67P46013 3256 aaKnown RBP11.98□□□□□ -0.49
HMGXB3-201ENST00000502717 RPL37AP8A6NKH3 93 aa11.98□□□□□ -0.49
HMGXB3-201ENST00000502717 ZNF575Q86XF7 245 aa11.97□□□□□ -0.49
HMGXB3-201ENST00000502717 LINC00208Q96KT6 92 aa11.97□□□□□ -0.49
HMGXB3-201ENST00000502717 PSPHP1O15172 72 aa11.95□□□□□ -0.5
HMGXB3-201ENST00000502717 A0A096LNI7 61 aa11.95□□□□□ -0.5
HMGXB3-201ENST00000502717 MUC4Q99102 2169 aa11.95□□□□□ -0.5
HMGXB3-201ENST00000502717 Q8N9L7 120 aa11.94□□□□□ -0.5
HMGXB3-201ENST00000502717 ANKRD17O75179 2603 aaKnown RBP11.93□□□□□ -0.5
HMGXB3-201ENST00000502717 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
HMGXB3-201ENST00000502717 PRR15LQ9BU68 103 aa11.91□□□□□ -0.5
HMGXB3-201ENST00000502717 F8WDY8 70 aa11.91□□□□□ -0.5
HMGXB3-201ENST00000502717 C2orf48Q96LS8 159 aa11.91□□□□□ -0.5
HMGXB3-201ENST00000502717 LAMA3Q16787 3333 aa11.9□□□□□ -0.5
HMGXB3-201ENST00000502717 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
HMGXB3-201ENST00000502717 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
HMGXB3-201ENST00000502717 ZNF706Q9Y5V0 76 aaPredicted RBP11.87□□□□□ -0.51
HMGXB3-201ENST00000502717 A0A1B0GW54 56 aa11.87□□□□□ -0.51
HMGXB3-201ENST00000502717 HCG22E2RYF7 251 aa11.87□□□□□ -0.51
HMGXB3-201ENST00000502717 SEC61GP60059 68 aa11.87□□□□□ -0.51
HMGXB3-201ENST00000502717 C1orf134Q5TEV5 83 aa11.87□□□□□ -0.51
HMGXB3-201ENST00000502717 hDV103S1A0JD37 113 aa11.86□□□□□ -0.51
HMGXB3-201ENST00000502717 SMIM29Q86T20 159 aa11.86□□□□□ -0.51
HMGXB3-201ENST00000502717 RETNQ9HD89 108 aa11.86□□□□□ -0.51
HMGXB3-201ENST00000502717 HECTD1Q9ULT8 2610 aa11.85□□□□□ -0.51
HMGXB3-201ENST00000502717 KLKP1Q107X0 134 aa11.85□□□□□ -0.51
HMGXB3-201ENST00000502717 ELOF1P60002 83 aaKnown RBP11.84□□□□□ -0.51
HMGXB3-201ENST00000502717 ERC2-IT1O76042 136 aa11.84□□□□□ -0.51
HMGXB3-201ENST00000502717 CASC2Q6XLA1 102 aa11.83□□□□□ -0.52
HMGXB3-201ENST00000502717 Q6ZRU5 148 aa11.83□□□□□ -0.52
HMGXB3-201ENST00000502717 BRCA2P51587 3418 aa11.83□□□□□ -0.52
HMGXB3-201ENST00000502717 PLAC8L1A1L4L8 177 aa11.82□□□□□ -0.52
HMGXB3-201ENST00000502717 REG3GQ6UW15 175 aa11.81□□□□□ -0.52
HMGXB3-201ENST00000502717 H0Y9P7 68 aa11.8□□□□□ -0.52
HMGXB3-201ENST00000502717 KIAA0087Q14695 138 aa11.8□□□□□ -0.52
HMGXB3-201ENST00000502717 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
HMGXB3-201ENST00000502717 LIMD2Q9BT23 127 aa11.8□□□□□ -0.52
HMGXB3-201ENST00000502717 IGLV5-52A0A0A0MRZ9 124 aa11.8□□□□□ -0.52
HMGXB3-201ENST00000502717 KRTAP24-1Q3LI83 254 aa11.79□□□□□ -0.52
HMGXB3-201ENST00000502717 Q6ZTC4 211 aa11.79□□□□□ -0.52
HMGXB3-201ENST00000502717 C6orf48Q9UBA6 75 aa11.79□□□□□ -0.52
HMGXB3-201ENST00000502717 A0A087WSZ3 146 aa11.78□□□□□ -0.52
HMGXB3-201ENST00000502717 H7BZZ5 65 aa11.77□□□□□ -0.52
HMGXB3-201ENST00000502717 IGLV6-57P01721 117 aa11.75□□□□□ -0.53
HMGXB3-201ENST00000502717 LINC00336Q6ZUF6 198 aa11.75□□□□□ -0.53
HMGXB3-201ENST00000502717 MGAM2Q2M2H8 2515 aa11.74□□□□□ -0.53
HMGXB3-201ENST00000502717 C9orf129Q5T035 196 aaKnown RBP11.74□□□□□ -0.53
HMGXB3-201ENST00000502717 MAST4O15021 2626 aa11.73□□□□□ -0.53
HMGXB3-201ENST00000502717 WIPF1O43516 503 aa11.73□□□□□ -0.53
HMGXB3-201ENST00000502717 OBSCN-AS1Q96MR7 158 aa11.72□□□□□ -0.53
HMGXB3-201ENST00000502717 DEFB116Q30KQ4 102 aa11.72□□□□□ -0.53
HMGXB3-201ENST00000502717 Q9BRP9 147 aa11.71□□□□□ -0.53
HMGXB3-201ENST00000502717 GVQW2A0A096LPI5 108 aaPredicted RBP11.71□□□□□ -0.54
HMGXB3-201ENST00000502717 Q8NBF4 154 aa11.7□□□□□ -0.54
HMGXB3-201ENST00000502717 LINC00167Q96N53 147 aa11.7□□□□□ -0.54
HMGXB3-201ENST00000502717 LAMA2P24043 3122 aaKnown RBP11.69□□□□□ -0.54
HMGXB3-201ENST00000502717 C1orf64Q8NEQ6 169 aa11.69□□□□□ -0.54
HMGXB3-201ENST00000502717 WWC2-AS2Q96NR7 200 aa11.69□□□□□ -0.54
HMGXB3-201ENST00000502717 PCOTHQ58A44 107 aa11.68□□□□□ -0.54
HMGXB3-201ENST00000502717 X6R8D5 127 aa11.67□□□□□ -0.54
HMGXB3-201ENST00000502717 H3BPC8 53 aa11.66□□□□□ -0.54
HMGXB3-201ENST00000502717 C22orf24Q9Y442 160 aa11.65□□□□□ -0.54
HMGXB3-201ENST00000502717 IGLV9-49A0A0B4J1Y8 123 aa11.65□□□□□ -0.54
HMGXB3-201ENST00000502717 SPINK6Q6UWN8 80 aa11.64□□□□□ -0.55
HMGXB3-201ENST00000502717 ZNF292O60281 2723 aa11.64□□□□□ -0.55
HMGXB3-201ENST00000502717 USP24Q9UPU5 2620 aa11.64□□□□□ -0.55
HMGXB3-201ENST00000502717 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
HMGXB3-201ENST00000502717 PRUNE2Q8WUY3 3088 aa11.63□□□□□ -0.55
HMGXB3-201ENST00000502717 FAM104AQ969W3 186 aa11.62□□□□□ -0.55
HMGXB3-201ENST00000502717 Q6ZRX8 168 aa11.62□□□□□ -0.55
HMGXB3-201ENST00000502717 VPREB1P12018 145 aa11.62□□□□□ -0.55
HMGXB3-201ENST00000502717 MDFIQ99750 246 aa11.59□□□□□ -0.55
HMGXB3-201ENST00000502717 UNC80Q8N2C7 3258 aa11.59□□□□□ -0.55
HMGXB3-201ENST00000502717 ATRQ13535 2644 aa11.59□□□□□ -0.55
HMGXB3-201ENST00000502717 LINC01556Q5JQF7 62 aa11.58□□□□□ -0.56
HMGXB3-201ENST00000502717 IGHV6-1A0A0B4J1U7 121 aa11.58□□□□□ -0.56
HMGXB3-201ENST00000502717 A0A096LNT2 108 aa11.58□□□□□ -0.56
HMGXB3-201ENST00000502717 LINC00528Q8N1L1 170 aa11.58□□□□□ -0.56
HMGXB3-201ENST00000502717 PRLHP81277 87 aa11.57□□□□□ -0.56
HMGXB3-201ENST00000502717 CSNK1G2-AS1Q8NCQ2 148 aa11.57□□□□□ -0.56
HMGXB3-201ENST00000502717 FAM229AH3BQW9 127 aa11.56□□□□□ -0.56
HMGXB3-201ENST00000502717 HELZ2Q9BYK8 2649 aaKnown RBP11.55□□□□□ -0.56
HMGXB3-201ENST00000502717 H3BNG1 76 aa11.55□□□□□ -0.56
HMGXB3-201ENST00000502717 LINC00476Q8WZB0 136 aa11.55□□□□□ -0.56
HMGXB3-201ENST00000502717 TP53AIP1Q9HCN2 124 aa11.55□□□□□ -0.56
HMGXB3-201ENST00000502717 TRIOO75962 3097 aa11.53□□□□□ -0.56
HMGXB3-201ENST00000502717 K7ERS5 55 aa11.53□□□□□ -0.56
HMGXB3-201ENST00000502717 A8MUN3 132 aa11.52□□□□□ -0.57
HMGXB3-201ENST00000502717 ST20-AS1Q8NBB2 130 aa11.51□□□□□ -0.57
HMGXB3-201ENST00000502717 K7EQZ3 153 aa11.5□□□□□ -0.57
HMGXB3-201ENST00000502717 GIG44P09565 113 aaPredicted RBP11.5□□□□□ -0.57
HMGXB3-201ENST00000502717 Q6ZRP5 223 aa11.49□□□□□ -0.57
HMGXB3-201ENST00000502717 KCNQ1DNQ9H478 68 aa11.49□□□□□ -0.57
HMGXB3-201ENST00000502717 TRAV22A0A0B4J277 110 aa11.49□□□□□ -0.57
HMGXB3-201ENST00000502717 CYP4F30PQ9H0H9 118 aa11.49□□□□□ -0.57
HMGXB3-201ENST00000502717 Q5XG85 94 aa11.48□□□□□ -0.57
HMGXB3-201ENST00000502717 MGAQ8IWI9 3026 aa11.48□□□□□ -0.57
HMGXB3-201ENST00000502717 PRR34Q9NV39 138 aa11.47□□□□□ -0.57
HMGXB3-201ENST00000502717 C16orf90A8MZG2 172 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms