RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
CMSS1-209ENST00000497345 WFDC2Q14508 124 aa3.13□□□□□ -1.91
CMSS1-209ENST00000497345 KIAA0087Q14695 138 aa3.13□□□□□ -1.91
CMSS1-209ENST00000497345 GAGE2EQ4V326 116 aa3.13□□□□□ -1.91
CMSS1-209ENST00000497345 SFTA2Q6UW10 78 aa3.13□□□□□ -1.91
CMSS1-209ENST00000497345 MIR7-3HGQ8N6C7 128 aa3.13□□□□□ -1.91
CMSS1-209ENST00000497345 LITAFQ99732 161 aa3.13□□□□□ -1.91
CMSS1-209ENST00000497345 GAGE2DQ9UEU5 116 aa3.13□□□□□ -1.91
CMSS1-209ENST00000497345 ERG28Q9UKR5 140 aa3.13□□□□□ -1.91
CMSS1-209ENST00000497345 TENM2Q9NT68 2774 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 A4D1N5 150 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 A6NDN8 102 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 HERV-K104P63124 156 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 PRR3P79522 188 aaKnown RBP3.12□□□□□ -1.91
CMSS1-209ENST00000497345 SYCNQ0VAF6 134 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 TAL2Q16559 108 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 COL5A1-AS1Q5SY13 56 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 SOSTDC1Q6X4U4 206 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 Q6ZRU5 148 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 LINC01561Q8N1V8 128 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 LINC00308Q8TCZ7 52 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 C6orf48Q9UBA6 75 aa3.12□□□□□ -1.91
CMSS1-209ENST00000497345 PRKDCP78527 4128 aaKnown RBP3.11□□□□□ -1.91
CMSS1-209ENST00000497345 C3orf84H3BNL1 204 aa3.11□□□□□ -1.91
CMSS1-209ENST00000497345 RPL24P83731 157 aaKnown RBP3.11□□□□□ -1.91
CMSS1-209ENST00000497345 RPL18AQ02543 176 aaKnown RBP3.11□□□□□ -1.91
CMSS1-209ENST00000497345 GAGE2BQ13066 116 aa3.11□□□□□ -1.91
CMSS1-209ENST00000497345 Q1RN00 199 aa3.11□□□□□ -1.91
CMSS1-209ENST00000497345 LINC01620Q4KN68 170 aa3.11□□□□□ -1.91
CMSS1-209ENST00000497345 TTC32Q5I0X7 151 aa3.11□□□□□ -1.91
CMSS1-209ENST00000497345 OR13C6PQ8NH95 151 aa3.11□□□□□ -1.91
CMSS1-209ENST00000497345 CARD19Q96LW7 228 aa3.11□□□□□ -1.91
CMSS1-209ENST00000497345 XAGE1AQ9HD64 81 aa3.11□□□□□ -1.91
CMSS1-209ENST00000497345 SPANXB1Q9NS25 103 aaPredicted RBP3.11□□□□□ -1.91
CMSS1-209ENST00000497345 GVQW2A0A096LPI5 108 aaPredicted RBP3.1□□□□□ -1.91
CMSS1-209ENST00000497345 H3BUT2 72 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 TAX1BP3O14907 124 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 NCR3O14931 201 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 TIMM17BO60830 172 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 CFC1BP0CG36 223 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 CFC1P0CG37 223 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 CXCL5P42830 114 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 SPANXDQ9BXN6 97 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 SND1-IT1Q9HBX3 110 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 SPANXCQ9NY87 97 aa3.1□□□□□ -1.91
CMSS1-209ENST00000497345 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 LOC107984156A0A0G2JMH3 177 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 IFITM1P13164 125 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 RPL13AP40429 203 aaKnown RBP3.09□□□□□ -1.91
CMSS1-209ENST00000497345 PSMB2P49721 201 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 VAMP3Q15836 100 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 C1orf134Q5TEV5 83 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 ARL17AQ8IVW1 177 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 PRR26Q8N8Z3 221 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 C2orf48Q96LS8 159 aa3.09□□□□□ -1.91
CMSS1-209ENST00000497345 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
CMSS1-209ENST00000497345 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.08□□□□□ -1.92
CMSS1-209ENST00000497345 TRBV30A0A0K0K1B3 111 aa3.08□□□□□ -1.92
CMSS1-209ENST00000497345 GAGE10A6NGK3 116 aa3.08□□□□□ -1.92
CMSS1-209ENST00000497345 TSPAN13O95857 204 aa3.08□□□□□ -1.92
CMSS1-209ENST00000497345 SCGB1C2P0DMR2 95 aa3.08□□□□□ -1.92
CMSS1-209ENST00000497345 Q6ZR54 194 aa3.08□□□□□ -1.92
CMSS1-209ENST00000497345 DPH3Q96FX2 82 aa3.08□□□□□ -1.92
CMSS1-209ENST00000497345 PRO1854Q9UHT4 67 aa3.08□□□□□ -1.92
CMSS1-209ENST00000497345 STARD9Q9P2P6 4700 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 FAM168BA1KXE4 195 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 NDUFC2-KCTD14E9PQ53 114 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 COX17Q14061 63 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 C14orf177Q52M58 125 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 S100A7L2Q5SY68 101 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
CMSS1-209ENST00000497345 Q6ZRP5 223 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 FAM19A5Q7Z5A7 132 aaPredicted RBP3.07□□□□□ -1.92
CMSS1-209ENST00000497345 Q8NDZ9 215 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 COPS9Q8WXC6 57 aa3.07□□□□□ -1.92
CMSS1-209ENST00000497345 DYNC2H1Q8NCM8 4307 aaKnown RBP3.07□□□□□ -1.92
CMSS1-209ENST00000497345 IGKV2-28A0A075B6P5 120 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 A0A087WTM6 91 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 A0A096LNI7 61 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 A0A1W2PPM0 123 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 LRCOL1A6NCL2 159 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 IGKV2D-28P01615 120 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 CHTF8P0CG12 524 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 LBHQ53QV2 105 aaPredicted RBP3.06□□□□□ -1.92
CMSS1-209ENST00000497345 C9orf129Q5T035 196 aaKnown RBP3.06□□□□□ -1.92
CMSS1-209ENST00000497345 LINC00337Q8N6G1 96 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 Q8N814 137 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 SPCS1Q9Y6A9 102 aa3.06□□□□□ -1.92
CMSS1-209ENST00000497345 IGLV5-52A0A0A0MRZ9 124 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 TRAV13-2A0A0B4J235 113 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 A0A0B4J2C4 111 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 LOC107984640A0A0U1RRK4 108 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 A0A1B0GWB2 263 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 RTL8CO15255 209 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 FABP2P12104 132 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 SERTAD4-AS1Q5TG53 156 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 MTURNQ8N3F0 131 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 NKAPP1Q8N9T2 125 aa3.05□□□□□ -1.92
CMSS1-209ENST00000497345 CLEC2BQ92478 149 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms