RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 C22orf24Q9Y442 160 aa7.91□□□□□ -1.14
RFC4-214ENST00000494047 WIPF1O43516 503 aa7.9□□□□□ -1.14
RFC4-214ENST00000494047 ANGP03950 147 aaKnown RBP7.9□□□□□ -1.14
RFC4-214ENST00000494047 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
RFC4-214ENST00000494047 Q8N814 137 aa7.9□□□□□ -1.14
RFC4-214ENST00000494047 LINC00526Q96FQ7 95 aa7.9□□□□□ -1.14
RFC4-214ENST00000494047 CCDC179H3BU77 68 aa7.89□□□□□ -1.15
RFC4-214ENST00000494047 LINC00269Q8N2A0 174 aa7.89□□□□□ -1.15
RFC4-214ENST00000494047 SMCR5Q8TEV8 140 aa7.89□□□□□ -1.15
RFC4-214ENST00000494047 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
RFC4-214ENST00000494047 TRBV7-6A0A0J9YX20 115 aa7.88□□□□□ -1.15
RFC4-214ENST00000494047 BCE1O60756 84 aa7.88□□□□□ -1.15
RFC4-214ENST00000494047 COX7CP15954 63 aa7.88□□□□□ -1.15
RFC4-214ENST00000494047 RPL18AQ02543 176 aaKnown RBP7.88□□□□□ -1.15
RFC4-214ENST00000494047 ZNF561-AS1K7EIQ3 104 aa7.87□□□□□ -1.15
RFC4-214ENST00000494047 C9orf153Q5TBE3 101 aa7.87□□□□□ -1.15
RFC4-214ENST00000494047 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
RFC4-214ENST00000494047 UBL5Q9BZL1 73 aa7.87□□□□□ -1.15
RFC4-214ENST00000494047 C14orf132Q9NPU4 83 aa7.87□□□□□ -1.15
RFC4-214ENST00000494047 PRR34Q9NV39 138 aa7.87□□□□□ -1.15
RFC4-214ENST00000494047 SPAG11BQ08648 103 aa7.86□□□□□ -1.15
RFC4-214ENST00000494047 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
RFC4-214ENST00000494047 hADV29S1A0JD25 119 aa7.85□□□□□ -1.15
RFC4-214ENST00000494047 CRYGAP11844 174 aa7.85□□□□□ -1.15
RFC4-214ENST00000494047 SS18L2Q9UHA2 77 aa7.85□□□□□ -1.15
RFC4-214ENST00000494047 LOC110117498A0A087WWA1 95 aa7.84□□□□□ -1.15
RFC4-214ENST00000494047 DEFB135Q30KP9 77 aa7.84□□□□□ -1.15
RFC4-214ENST00000494047 SMIM20Q8N5G0 67 aa7.84□□□□□ -1.15
RFC4-214ENST00000494047 Q8NAQ8 132 aa7.84□□□□□ -1.15
RFC4-214ENST00000494047 EGFEM1PQ0D2K5 195 aa7.84□□□□□ -1.16
RFC4-214ENST00000494047 LINC00575Q6W349 94 aa7.84□□□□□ -1.16
RFC4-214ENST00000494047 C11orf68Q9H3H3 251 aaKnown RBP7.84□□□□□ -1.16
RFC4-214ENST00000494047 IGLV6-57P01721 117 aa7.83□□□□□ -1.16
RFC4-214ENST00000494047 RBM3P98179 157 aaKnown RBP7.83□□□□□ -1.16
RFC4-214ENST00000494047 LYPD5Q6UWN5 251 aa7.83□□□□□ -1.16
RFC4-214ENST00000494047 SERP2Q8N6R1 65 aa7.83□□□□□ -1.16
RFC4-214ENST00000494047 NANOS2P60321 138 aaKnown RBP7.82□□□□□ -1.16
RFC4-214ENST00000494047 C6orf99Q4VX62 202 aa7.82□□□□□ -1.16
RFC4-214ENST00000494047 CLPSL2Q6UWE3 100 aa7.82□□□□□ -1.16
RFC4-214ENST00000494047 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.82□□□□□ -1.16
RFC4-214ENST00000494047 LINC00846Q9NV44 126 aa7.82□□□□□ -1.16
RFC4-214ENST00000494047 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
RFC4-214ENST00000494047 NCR3O14931 201 aa7.81□□□□□ -1.16
RFC4-214ENST00000494047 DIRC1Q969H9 104 aa7.81□□□□□ -1.16
RFC4-214ENST00000494047 C2orf48Q96LS8 159 aa7.81□□□□□ -1.16
RFC4-214ENST00000494047 TMEM258P61165 79 aa7.8□□□□□ -1.16
RFC4-214ENST00000494047 C6orf223Q8N319 242 aa7.8□□□□□ -1.16
RFC4-214ENST00000494047 MRAPQ8TCY5 172 aa7.8□□□□□ -1.16
RFC4-214ENST00000494047 DSCR8Q96T75 97 aa7.8□□□□□ -1.16
RFC4-214ENST00000494047 NDUFC2-KCTD14E9PQ53 114 aa7.79□□□□□ -1.16
RFC4-214ENST00000494047 DNAH3Q8TD57 4116 aa7.79□□□□□ -1.16
RFC4-214ENST00000494047 TRAV23DV6A0A075B6W5 121 aa7.78□□□□□ -1.16
RFC4-214ENST00000494047 A0A096LPF7 62 aa7.78□□□□□ -1.16
RFC4-214ENST00000494047 TGP01266 2768 aa7.78□□□□□ -1.16
RFC4-214ENST00000494047 USP17L23D6RBM5 183 aa7.77□□□□□ -1.17
RFC4-214ENST00000494047 RPS28P62857 69 aaKnown RBP7.77□□□□□ -1.17
RFC4-214ENST00000494047 CXCL6P80162 114 aa7.77□□□□□ -1.17
RFC4-214ENST00000494047 LAMTOR3Q9UHA4 124 aa7.77□□□□□ -1.17
RFC4-214ENST00000494047 IGLV10-54A0A075B6I4 117 aa7.76□□□□□ -1.17
RFC4-214ENST00000494047 A0A1B0GW54 56 aa7.76□□□□□ -1.17
RFC4-214ENST00000494047 J3KT08 172 aa7.76□□□□□ -1.17
RFC4-214ENST00000494047 PRB2P02812 416 aaPredicted RBP7.76□□□□□ -1.17
RFC4-214ENST00000494047 KRTAP10-11P60412 298 aa7.76□□□□□ -1.17
RFC4-214ENST00000494047 Q6ZQT0 140 aa7.76□□□□□ -1.17
RFC4-214ENST00000494047 M0R378 163 aa7.75□□□□□ -1.17
RFC4-214ENST00000494047 SLPIP03973 132 aa7.75□□□□□ -1.17
RFC4-214ENST00000494047 COX7BP24311 80 aa7.75□□□□□ -1.17
RFC4-214ENST00000494047 KLK12Q9UKR0 248 aa7.75□□□□□ -1.17
RFC4-214ENST00000494047 K7EIL1 84 aa7.74□□□□□ -1.17
RFC4-214ENST00000494047 ZNF73O43830 326 aaPredicted RBP7.74□□□□□ -1.17
RFC4-214ENST00000494047 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
RFC4-214ENST00000494047 IGKV3D-7A0A0C4DH55 119 aa7.73□□□□□ -1.17
RFC4-214ENST00000494047 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
RFC4-214ENST00000494047 CAMK2N2Q96S95 79 aa7.73□□□□□ -1.17
RFC4-214ENST00000494047 CELA1Q9UNI1 258 aa7.73□□□□□ -1.17
RFC4-214ENST00000494047 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
RFC4-214ENST00000494047 ENHOQ6UWT2 76 aa7.72□□□□□ -1.17
RFC4-214ENST00000494047 HTN3P15516 51 aa7.71□□□□□ -1.17
RFC4-214ENST00000494047 B9D2Q9BPU9 175 aa7.71□□□□□ -1.17
RFC4-214ENST00000494047 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.17
RFC4-214ENST00000494047 C9orf116Q5BN46 136 aaPredicted RBP7.71□□□□□ -1.18
RFC4-214ENST00000494047 LINC01556Q5JQF7 62 aa7.71□□□□□ -1.18
RFC4-214ENST00000494047 Q6ZQY7 126 aa7.71□□□□□ -1.18
RFC4-214ENST00000494047 UPK3BQ9BT76 320 aa7.71□□□□□ -1.18
RFC4-214ENST00000494047 C1orf43Q9BWL3 253 aa7.71□□□□□ -1.18
RFC4-214ENST00000494047 LOC107984640A0A0U1RRK4 108 aa7.7□□□□□ -1.18
RFC4-214ENST00000494047 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
RFC4-214ENST00000494047 DEFB4AO15263 64 aa7.69□□□□□ -1.18
RFC4-214ENST00000494047 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
RFC4-214ENST00000494047 C10orf25Q5T742 122 aa7.69□□□□□ -1.18
RFC4-214ENST00000494047 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
RFC4-214ENST00000494047 VPREB1P12018 145 aa7.68□□□□□ -1.18
RFC4-214ENST00000494047 RMI2Q96E14 147 aa7.68□□□□□ -1.18
RFC4-214ENST00000494047 PLA2G2DQ9UNK4 145 aa7.68□□□□□ -1.18
RFC4-214ENST00000494047 NDUFC1O43677 76 aa7.67□□□□□ -1.18
RFC4-214ENST00000494047 TLX1NBP0CAT3 122 aa7.66□□□□□ -1.18
RFC4-214ENST00000494047 ATP5EP56381 51 aaPredicted RBP7.65□□□□□ -1.18
RFC4-214ENST00000494047 LINC01547P58512 204 aaPredicted RBP7.65□□□□□ -1.18
RFC4-214ENST00000494047 Q6ZVQ6 151 aa7.65□□□□□ -1.18
RFC4-214ENST00000494047 DHRS4-AS1Q9P1J3 65 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms