RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 RMI2Q96E14 147 aa4.48□□□□□ -1.69
TPR-208ENST00000492973 C14orf144Q96I85 54 aa4.48□□□□□ -1.69
TPR-208ENST00000492973 PRO1933Q9H354 126 aa4.48□□□□□ -1.69
TPR-208ENST00000492973 IGHV3-64A0A075B6Q5 118 aa4.47□□□□□ -1.69
TPR-208ENST00000492973 A0A087WTM6 91 aa4.47□□□□□ -1.69
TPR-208ENST00000492973 COX7A2LO14548 114 aa4.47□□□□□ -1.69
TPR-208ENST00000492973 COX8AP10176 69 aa4.47□□□□□ -1.69
TPR-208ENST00000492973 HERVK_113P61574 105 aa4.47□□□□□ -1.69
TPR-208ENST00000492973 PCP2Q8IVA1 136 aa4.47□□□□□ -1.69
TPR-208ENST00000492973 TTTY13Q9BZ97 58 aa4.47□□□□□ -1.69
TPR-208ENST00000492973 J3QQQ9 107 aa4.46□□□□□ -1.7
TPR-208ENST00000492973 LECT2O14960 151 aa4.46□□□□□ -1.7
TPR-208ENST00000492973 PSCAO43653 123 aa4.46□□□□□ -1.7
TPR-208ENST00000492973 NMUP48645 174 aa4.46□□□□□ -1.7
TPR-208ENST00000492973 TSPEAR-AS2P59090 65 aa4.46□□□□□ -1.7
TPR-208ENST00000492973 KIAA0087Q14695 138 aa4.46□□□□□ -1.7
TPR-208ENST00000492973 BOD1L2Q8IYS8 172 aa4.46□□□□□ -1.7
TPR-208ENST00000492973 PLEKHB2Q96CS7 222 aa4.46□□□□□ -1.7
TPR-208ENST00000492973 DLEU1O43261 78 aa4.45□□□□□ -1.7
TPR-208ENST00000492973 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
TPR-208ENST00000492973 SLC25A34Q6PIV7 304 aa4.45□□□□□ -1.7
TPR-208ENST00000492973 COX7B2Q8TF08 81 aa4.45□□□□□ -1.7
TPR-208ENST00000492973 MIEN1Q9BRT3 115 aa4.45□□□□□ -1.7
TPR-208ENST00000492973 MYMXA0A1B0GTQ4 84 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 APOMO95445 188 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 LGALS3P17931 250 aaKnown RBP4.44□□□□□ -1.7
TPR-208ENST00000492973 C6orf226Q5I0X4 101 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 Q8IZM0 81 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 ORAOV1Q8WV07 137 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 UQCR10Q9UDW1 63 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 TP73-AS1Q9UF72 201 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 NDUFA12Q9UI09 145 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 FAT1Q14517 4588 aa4.44□□□□□ -1.7
TPR-208ENST00000492973 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
TPR-208ENST00000492973 NDUFA1O15239 70 aa4.43□□□□□ -1.7
TPR-208ENST00000492973 Q8N814 137 aa4.43□□□□□ -1.7
TPR-208ENST00000492973 C15orf56Q8N910 161 aa4.43□□□□□ -1.7
TPR-208ENST00000492973 ZNF625Q96I27 306 aaPredicted RBP4.43□□□□□ -1.7
TPR-208ENST00000492973 TOMM7Q9P0U1 55 aa4.43□□□□□ -1.7
TPR-208ENST00000492973 A0A0J9YXY3 114 aa4.42□□□□□ -1.7
TPR-208ENST00000492973 TSTD3H0UI37 97 aa4.42□□□□□ -1.7
TPR-208ENST00000492973 C2orf91Q6ZV80 131 aa4.42□□□□□ -1.7
TPR-208ENST00000492973 LINC00526Q96FQ7 95 aa4.42□□□□□ -1.7
TPR-208ENST00000492973 HIGD1BQ9P298 99 aa4.42□□□□□ -1.7
TPR-208ENST00000492973 HSPG2P98160 4391 aa4.41□□□□□ -1.7
TPR-208ENST00000492973 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
TPR-208ENST00000492973 HIGD2BQ4VC39 106 aa4.41□□□□□ -1.7
TPR-208ENST00000492973 C2orf82Q6UX34 121 aa4.41□□□□□ -1.7
TPR-208ENST00000492973 UNQ6190/PRO20217Q6UXQ8 127 aa4.41□□□□□ -1.7
TPR-208ENST00000492973 C2orf48Q96LS8 159 aa4.41□□□□□ -1.7
TPR-208ENST00000492973 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.4□□□□□ -1.71
TPR-208ENST00000492973 GVQW2A0A096LPI5 108 aaPredicted RBP4.4□□□□□ -1.71
TPR-208ENST00000492973 PCP4L1A6NKN8 68 aa4.4□□□□□ -1.71
TPR-208ENST00000492973 KRTAP16-1A8MUX0 517 aa4.4□□□□□ -1.71
TPR-208ENST00000492973 F8WDY8 70 aa4.4□□□□□ -1.71
TPR-208ENST00000492973 DDTP30046 118 aa4.4□□□□□ -1.71
TPR-208ENST00000492973 CXCL5P42830 114 aa4.4□□□□□ -1.71
TPR-208ENST00000492973 KRTAP10-12P60413 245 aa4.4□□□□□ -1.71
TPR-208ENST00000492973 HERV-K104P63124 156 aa4.4□□□□□ -1.71
TPR-208ENST00000492973 CTAG1AP78358 180 aa4.4□□□□□ -1.71
TPR-208ENST00000492973 C16orf90A8MZG2 172 aa4.39□□□□□ -1.71
TPR-208ENST00000492973 HNRNPA3P51991 378 aaKnown RBP4.39□□□□□ -1.71
TPR-208ENST00000492973 KRTAP10-1P60331 282 aa4.39□□□□□ -1.71
TPR-208ENST00000492973 CKS1BP61024 79 aa4.39□□□□□ -1.71
TPR-208ENST00000492973 SFTA2Q6UW10 78 aa4.39□□□□□ -1.71
TPR-208ENST00000492973 SCGB1D4Q6XE38 83 aa4.39□□□□□ -1.71
TPR-208ENST00000492973 A0A0U1RRA0 63 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 TIMM17BO60830 172 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 SMIM13P0DJ93 91 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
TPR-208ENST00000492973 SYCNQ0VAF6 134 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 CIRBPQ14011 172 aaKnown RBP4.38□□□□□ -1.71
TPR-208ENST00000492973 LINC01620Q4KN68 170 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 C9orf116Q5BN46 136 aaPredicted RBP4.38□□□□□ -1.71
TPR-208ENST00000492973 Q6ZRU5 148 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 SPANXB1Q9NS25 103 aaPredicted RBP4.38□□□□□ -1.71
TPR-208ENST00000492973 C6orf48Q9UBA6 75 aa4.38□□□□□ -1.71
TPR-208ENST00000492973 TRBV30A0A0K0K1B3 111 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 LINC00587B1AMM8 73 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 PFN2P35080 140 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
TPR-208ENST00000492973 TAL2Q16559 108 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 MEIG1Q5JSS6 88 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 MUSTN1Q8IVN3 82 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 ERG28Q9UKR5 140 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
TPR-208ENST00000492973 TMEM238C9JI98 176 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 LINC00158P58513 81 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 COX17Q14061 63 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 Q6ZVH6 145 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 DAND5Q8N907 189 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 C9orf163Q8N9P6 203 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 HIST1H4GQ99525 98 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 SPANXDQ9BXN6 97 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 SPANXCQ9NY87 97 aa4.36□□□□□ -1.71
TPR-208ENST00000492973 LOC107984156A0A0G2JMH3 177 aa4.35□□□□□ -1.71
TPR-208ENST00000492973 CDK2AP2O75956 126 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms