RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MINOS1-NBL1R4GNA1 71 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 FREM1Q5H8C1 2179 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 C3orf84H3BNL1 204 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 C19orf84I3L1E1 186 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 PRB4P10163 310 aaPredicted RBP2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 COX7BP24311 80 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 COX17Q14061 63 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 ADM2Q7Z4H4 148 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 TMEM105Q8N8V8 129 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 ST20-AS1Q8NBB2 130 aa2.09□□□□□ -2.07
ECHDC1-217ENST00000488087 MALRD1Q5VYJ5 2156 aa2.09□□□□□ -2.08
ECHDC1-217ENST00000488087 ARFGEF3Q5TH69 2177 aa2.08□□□□□ -2.08
ECHDC1-217ENST00000488087 MUC4Q99102 2169 aa2.08□□□□□ -2.08
ECHDC1-217ENST00000488087 CHKB-CPT1BH3BT56 60 aa2.08□□□□□ -2.08
ECHDC1-217ENST00000488087 KRTAP13-2Q52LG2 175 aa2.08□□□□□ -2.08
ECHDC1-217ENST00000488087 CNEP1R1Q8N9A8 125 aa2.08□□□□□ -2.08
ECHDC1-217ENST00000488087 USMG5Q96IX5 58 aa2.08□□□□□ -2.08
ECHDC1-217ENST00000488087 HIGD2AQ9BW72 106 aa2.08□□□□□ -2.08
ECHDC1-217ENST00000488087 PLAC8Q9NZF1 115 aa2.08□□□□□ -2.08
ECHDC1-217ENST00000488087 ZFHX3Q15911 3703 aa2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 ETDCA0A1B0GVM5 59 aa2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 PI4KAP42356 2102 aa2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 LINC00158P58513 81 aa2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 CNBPP62633 177 aaKnown RBP2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 LINC01554Q52M75 96 aa2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 LUZP6Q538Z0 58 aa2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 C9orf116Q5BN46 136 aaPredicted RBP2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 KPRPQ5T749 579 aaPredicted RBP2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 Q8IZM0 81 aa2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 KCNQ1DNQ9H478 68 aa2.07□□□□□ -2.08
ECHDC1-217ENST00000488087 GPR179Q6PRD1 2367 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 TRGV2A0A075B6R0 118 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 A8MUU9 505 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 M0R2N4 97 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 PRM2P04554 102 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 SPINT4Q6UDR6 99 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 DEFB132Q7Z7B7 95 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 LINC00208Q96KT6 92 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 B9D2Q9BPU9 175 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 LINC01558Q9Y6Z2 57 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 DOCK10Q96BY6 2186 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 ASCC3Q8N3C0 2202 aaKnown RBP2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 ASXL3Q9C0F0 2248 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 CACNA1GO43497 2377 aa2.06□□□□□ -2.08
ECHDC1-217ENST00000488087 POLEQ07864 2286 aa2.05□□□□□ -2.08
ECHDC1-217ENST00000488087 IGHV3OR16-8A0A075B7F1 116 aa2.05□□□□□ -2.08
ECHDC1-217ENST00000488087 IGHV3-73A0A0B4J1V6 119 aa2.05□□□□□ -2.08
ECHDC1-217ENST00000488087 IGLV6-57P01721 117 aa2.05□□□□□ -2.08
ECHDC1-217ENST00000488087 BSPH1Q075Z2 132 aa2.05□□□□□ -2.08
ECHDC1-217ENST00000488087 RHPN1-AS1Q9BWJ2 59 aa2.05□□□□□ -2.08
ECHDC1-217ENST00000488087 KNL1Q8NG31 2342 aa2.05□□□□□ -2.08
ECHDC1-217ENST00000488087 CEP350Q5VT06 3117 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 A6NED7 52 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 ARHGAP32A7KAX9 2087 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 CCL5P13501 91 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 UTRNP46939 3433 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 SDK2Q58EX2 2172 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 CASC2Q6XLA1 102 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 DEFB119Q8N690 84 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 SPTSSBQ8NFR3 76 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 DEFB104AQ8WTQ1 72 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 PRR15LQ9BU68 103 aa2.04□□□□□ -2.08
ECHDC1-217ENST00000488087 ZGRF1Q86YA3 2104 aa2.03□□□□□ -2.08
ECHDC1-217ENST00000488087 IGLV5-48A0A075B6I7 105 aa2.03□□□□□ -2.08
ECHDC1-217ENST00000488087 Q6ZQY7 126 aa2.03□□□□□ -2.08
ECHDC1-217ENST00000488087 C5orf56Q8N8D9 126 aa2.03□□□□□ -2.08
ECHDC1-217ENST00000488087 C9orf163Q8N9P6 203 aa2.03□□□□□ -2.08
ECHDC1-217ENST00000488087 F5P12259 2224 aa2.03□□□□□ -2.08
ECHDC1-217ENST00000488087 CADP27708 2225 aa2.03□□□□□ -2.08
ECHDC1-217ENST00000488087 PLXNB1O43157 2135 aa2.02□□□□□ -2.09
ECHDC1-217ENST00000488087 GVQW2A0A096LPI5 108 aaPredicted RBP2.02□□□□□ -2.09
ECHDC1-217ENST00000488087 DEFB1P60022 68 aa2.02□□□□□ -2.09
ECHDC1-217ENST00000488087 SPRR4Q96PI1 79 aa2.02□□□□□ -2.09
ECHDC1-217ENST00000488087 FAM215AQ9Y5M1 114 aa2.02□□□□□ -2.09
ECHDC1-217ENST00000488087 DNAJC13O75165 2243 aa2.02□□□□□ -2.09
ECHDC1-217ENST00000488087 SZT2Q5T011 3432 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 LINC00959A0A1B0GUT2 108 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 G3V318 75 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 IGLV7-43P04211 117 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 SPINK13Q1W4C9 94 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 SCXQ7RTU7 201 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 WFDC10AQ9H1F0 79 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 TOMM7Q9P0U1 55 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 UNC80Q8N2C7 3258 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 CNTRLQ7Z7A1 2325 aa2.01□□□□□ -2.09
ECHDC1-217ENST00000488087 MED13Q9UHV7 2174 aa2□□□□□ -2.09
ECHDC1-217ENST00000488087 RANBP2P49792 3224 aaKnown RBP2□□□□□ -2.09
ECHDC1-217ENST00000488087 WDR87Q6ZQQ6 2873 aa2□□□□□ -2.09
ECHDC1-217ENST00000488087 A8MWP4 228 aa2□□□□□ -2.09
ECHDC1-217ENST00000488087 COA5Q86WW8 74 aa2□□□□□ -2.09
ECHDC1-217ENST00000488087 Q8NAQ8 132 aa2□□□□□ -2.09
ECHDC1-217ENST00000488087 COL6A3P12111 3177 aa1.99□□□□□ -2.09
ECHDC1-217ENST00000488087 HTTP42858 3142 aa1.99□□□□□ -2.09
ECHDC1-217ENST00000488087 TRGV4A0A0C4DH28 118 aa1.99□□□□□ -2.09
ECHDC1-217ENST00000488087 SPAG11BQ08648 103 aa1.99□□□□□ -2.09
ECHDC1-217ENST00000488087 FDCSPQ8NFU4 85 aa1.99□□□□□ -2.09
ECHDC1-217ENST00000488087 RETNLBQ9BQ08 111 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms