RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 NBASA2RRP1 2371 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 AGRNO00468 2067 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 PIEZO2Q9H5I5 2752 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 MYO15AQ9UKN7 3530 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 GTF3C1Q12789 2109 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 MED13Q9UHV7 2174 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 KIAA1549Q9HCM3 1950 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 AKAP13Q12802 2813 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 TRAV21A0A0B4J279 112 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 TRBV6-1A0A0K0K1D8 114 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 J3QKU1 62 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 IGKV3-20P01619 116 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 IGLV3-1P01715 115 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 ZNF137PP52743 207 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 ESPL1Q14674 2120 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 DEFB134Q4QY38 66 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 C10orf113Q5VZT2 155 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 ENHOQ6UWT2 76 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 WFDC9Q8NEX5 89 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 SPRR4Q96PI1 79 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 FRYLO94915 3013 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 DOCK10Q96BY6 2186 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 SVILO95425 2214 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 ZNF407Q9C0G0 2248 aa2.07□□□□□ -2.08
FXN-204ENST00000484259 MYO18BQ8IUG5 2567 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 IGSF10Q6WRI0 2623 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 ZNF462Q96JM2 2506 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 IGKV3D-15A0A087WSY6 115 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 IGKV2-40A0A087WW87 121 aaPredicted RBP2.06□□□□□ -2.08
FXN-204ENST00000484259 TRAV40A0A0B4J280 105 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 LRCOL1A6NCL2 159 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 J3QRE1 110 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 IGKV2D-40P01614 121 aaPredicted RBP2.06□□□□□ -2.08
FXN-204ENST00000484259 NDPQ00604 133 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 LINC00612Q8N6U2 182 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 GFRA4Q9GZZ7 299 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 TMEM14CQ9P0S9 112 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 DCHS1Q96JQ0 3298 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 MUC4Q99102 2169 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 LAMA1P25391 3075 aa2.06□□□□□ -2.08
FXN-204ENST00000484259 NACAE9PAV3 2078 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 ZGRF1Q86YA3 2104 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 SPTBN1Q01082 2364 aaKnown RBP2.05□□□□□ -2.08
FXN-204ENST00000484259 LINC01546A6NGU7 62 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 STATHP02808 62 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 PRB1P04280 392 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 RPL37AP61513 92 aaKnown RBP2.05□□□□□ -2.08
FXN-204ENST00000484259 SPATA8Q6RVD6 105 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 LINC00322Q6ZN03 302 aaPredicted RBP2.05□□□□□ -2.08
FXN-204ENST00000484259 ZCCHC13Q8WW36 166 aaKnown RBP2.05□□□□□ -2.08
FXN-204ENST00000484259 KRTAP1-5Q9BYS1 174 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 WFDC10AQ9H1F0 79 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 HELZ2Q9BYK8 2649 aaKnown RBP2.05□□□□□ -2.08
FXN-204ENST00000484259 DSPP15924 2871 aaKnown RBP2.05□□□□□ -2.08
FXN-204ENST00000484259 DMDP11532 3685 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 MALRD1Q5VYJ5 2156 aa2.05□□□□□ -2.08
FXN-204ENST00000484259 DIDO1Q9BTC0 2240 aaKnown RBP2.05□□□□□ -2.08
FXN-204ENST00000484259 SPTAN1Q13813 2472 aaKnown RBP2.05□□□□□ -2.08
FXN-204ENST00000484259 IGKV2D-30A0A075B6S6 120 aa2.04□□□□□ -2.08
FXN-204ENST00000484259 A0A1W2PNN7 141 aa2.04□□□□□ -2.08
FXN-204ENST00000484259 K7EMI3 77 aa2.04□□□□□ -2.08
FXN-204ENST00000484259 DNAH14Q0VDD8 3507 aa2.04□□□□□ -2.08
FXN-204ENST00000484259 DEFB114Q30KQ6 69 aa2.04□□□□□ -2.08
FXN-204ENST00000484259 MYO7BQ6PIF6 2116 aa2.04□□□□□ -2.08
FXN-204ENST00000484259 LRRK2Q5S007 2527 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 HIVEP3Q5T1R4 2406 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 PCNX1Q96RV3 2341 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 DNAJC13O75165 2243 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 NINQ8N4C6 2090 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 BPTFQ12830 3046 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 BAHCC1Q9P281 2608 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 COX6B1P14854 86 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 SPINK7P58062 85 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 RPL38P63173 70 aaKnown RBP2.03□□□□□ -2.08
FXN-204ENST00000484259 KRTAP24-1Q3LI83 254 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 SPINK14Q6IE38 97 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 GAFA1Q96PS6 74 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 SHANK1Q9Y566 2161 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
FXN-204ENST00000484259 DMXL2Q8TDJ6 3036 aa2.03□□□□□ -2.08
FXN-204ENST00000484259 FLNBO75369 2602 aaKnown RBP2.03□□□□□ -2.09
FXN-204ENST00000484259 DOPEY2Q9Y3R5 2298 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 A0A087WTM6 91 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 TRGV4A0A0C4DH28 118 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 NBDYA0A0U1RRE5 68 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 IGIPA6NJ69 53 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 M0R1W7 72 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 RNASE3P12724 160 aaKnown RBP2.02□□□□□ -2.09
FXN-204ENST00000484259 HRES1P13985 223 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 FXYD3Q14802 87 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 DEFB112Q30KQ8 113 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 C10orf55Q5SWW7 151 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 LCE1AQ5T7P2 110 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 RPS27LQ71UM5 84 aaKnown RBP2.02□□□□□ -2.09
FXN-204ENST00000484259 PTPN13Q12923 2485 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 ICE1Q9Y2F5 2266 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 ITPR1Q14643 2758 aa2.02□□□□□ -2.09
FXN-204ENST00000484259 FRYQ5TBA9 3013 aa2.01□□□□□ -2.09
FXN-204ENST00000484259 MGAQ8IWI9 3026 aa2.01□□□□□ -2.09
FXN-204ENST00000484259 DOPEY1Q5JWR5 2465 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms