RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CKS1BP61024 79 aa4.68□□□□□ -1.66
BRCA1-216ENST00000484087 ZNF625Q96I27 306 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-216ENST00000484087 PRO1854Q9UHT4 67 aa4.68□□□□□ -1.66
BRCA1-216ENST00000484087 KLK12Q9UKR0 248 aa4.68□□□□□ -1.66
BRCA1-216ENST00000484087 SPCS1Q9Y6A9 102 aa4.68□□□□□ -1.66
BRCA1-216ENST00000484087 IGLV10-54A0A075B6I4 117 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 NBDYA0A0U1RRE5 68 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 A0A1B0GVY2 172 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 K7EP34 96 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 IGHV3-33P01772 117 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 CFC1BP0CG36 223 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 CFC1P0CG37 223 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 FUSP35637 526 aaKnown RBP eCLIP4.67□□□□□ -1.66
BRCA1-216ENST00000484087 CCL18P55774 89 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 Q1RN00 199 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 ADAMTSL4-AS1Q5T5F5 129 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 Q8IZM0 81 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 UBE2WQ96B02 151 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 LITAFQ99732 161 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 NAA38Q9BRA0 125 aaKnown RBP4.67□□□□□ -1.66
BRCA1-216ENST00000484087 ERG28Q9UKR5 140 aa4.67□□□□□ -1.66
BRCA1-216ENST00000484087 IBA57-AS1B1ANH7 110 aa4.66□□□□□ -1.66
BRCA1-216ENST00000484087 LINC00158P58513 81 aa4.66□□□□□ -1.66
BRCA1-216ENST00000484087 WFDC10BQ8IUB3 73 aa4.66□□□□□ -1.66
BRCA1-216ENST00000484087 PPDPFQ9H3Y8 114 aa4.66□□□□□ -1.66
BRCA1-216ENST00000484087 PRR34Q9NV39 138 aa4.66□□□□□ -1.66
BRCA1-216ENST00000484087 LOC107984156A0A0G2JMH3 177 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 A0A0U1RRA0 63 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 GAGE12HA6NDE8 117 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 TSPAN13O95857 204 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 SCGB1C2P0DMR2 95 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 PSMB2P49721 201 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 NPC2P61916 151 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 LINC01556Q5JQF7 62 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 ARL17AQ8IVW1 177 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 LINC00308Q8TCZ7 52 aa4.65□□□□□ -1.66
BRCA1-216ENST00000484087 LRP1BQ9NZR2 4599 aa4.65□□□□□ -1.67
BRCA1-216ENST00000484087 COX6CP09669 75 aa4.64□□□□□ -1.67
BRCA1-216ENST00000484087 FOXI1Q12951 378 aa4.64□□□□□ -1.67
BRCA1-216ENST00000484087 C1orf134Q5TEV5 83 aa4.64□□□□□ -1.67
BRCA1-216ENST00000484087 DAND5Q8N907 189 aa4.64□□□□□ -1.67
BRCA1-216ENST00000484087 RYR1P21817 5038 aa4.64□□□□□ -1.67
BRCA1-216ENST00000484087 TRBV20-1A0A075B6N2 111 aa4.63□□□□□ -1.67
BRCA1-216ENST00000484087 H7C2G1 150 aa4.63□□□□□ -1.67
BRCA1-216ENST00000484087 SPAG11BQ08648 103 aa4.63□□□□□ -1.67
BRCA1-216ENST00000484087 COX17Q14061 63 aa4.63□□□□□ -1.67
BRCA1-216ENST00000484087 ENHOQ6UWT2 76 aa4.63□□□□□ -1.67
BRCA1-216ENST00000484087 C6orf223Q8N319 242 aa4.63□□□□□ -1.67
BRCA1-216ENST00000484087 MIR7-3HGQ8N6C7 128 aa4.63□□□□□ -1.67
BRCA1-216ENST00000484087 APOBP04114 4563 aaKnown RBP4.63□□□□□ -1.67
BRCA1-216ENST00000484087 TRIAP1O43715 76 aa4.62□□□□□ -1.67
BRCA1-216ENST00000484087 DNAH10OSP0CZ25 163 aa4.62□□□□□ -1.67
BRCA1-216ENST00000484087 PFN2P35080 140 aa4.62□□□□□ -1.67
BRCA1-216ENST00000484087 UPK3BQ9BT76 320 aa4.62□□□□□ -1.67
BRCA1-216ENST00000484087 TRAV13-2A0A0B4J235 113 aa4.62□□□□□ -1.67
BRCA1-216ENST00000484087 RPL13AP40429 203 aaKnown RBP4.62□□□□□ -1.67
BRCA1-216ENST00000484087 LINC00336Q6ZUF6 198 aa4.62□□□□□ -1.67
BRCA1-216ENST00000484087 RMI2Q96E14 147 aa4.62□□□□□ -1.67
BRCA1-216ENST00000484087 SND1-IT1Q9HBX3 110 aa4.62□□□□□ -1.67
BRCA1-216ENST00000484087 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 ABCA13Q86UQ4 5058 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 HSPG2P98160 4391 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 IGKV2D-24A0A075B6R9 120 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 TRBV30A0A0K0K1B3 111 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 F8W1H4 67 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 KIAA0087Q14695 138 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 C2orf82Q6UX34 121 aa4.61□□□□□ -1.67
BRCA1-216ENST00000484087 F8WDY8 70 aa4.6□□□□□ -1.67
BRCA1-216ENST00000484087 H3BMG7 143 aa4.6□□□□□ -1.67
BRCA1-216ENST00000484087 ATXN8Q156A1 80 aa4.6□□□□□ -1.67
BRCA1-216ENST00000484087 SOSTDC1Q6X4U4 206 aa4.6□□□□□ -1.67
BRCA1-216ENST00000484087 Q6ZRN7 208 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-216ENST00000484087 TTC32Q5I0X7 151 aa4.59□□□□□ -1.67
BRCA1-216ENST00000484087 CAMK2N2Q96S95 79 aa4.59□□□□□ -1.67
BRCA1-216ENST00000484087 Q9HAA7 133 aa4.59□□□□□ -1.67
BRCA1-216ENST00000484087 GVQW2A0A096LPI5 108 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-216ENST00000484087 PCP4P48539 62 aa4.58□□□□□ -1.68
BRCA1-216ENST00000484087 NTN5Q8WTR8 489 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-216ENST00000484087 C2orf48Q96LS8 159 aa4.58□□□□□ -1.68
BRCA1-216ENST00000484087 C16orf90A8MZG2 172 aa4.57□□□□□ -1.68
BRCA1-216ENST00000484087 NDUFC2O95298 119 aa4.57□□□□□ -1.68
BRCA1-216ENST00000484087 TCL1BO95988 128 aa4.57□□□□□ -1.68
BRCA1-216ENST00000484087 UNQ6190/PRO20217Q6UXQ8 127 aa4.57□□□□□ -1.68
BRCA1-216ENST00000484087 OR13C6PQ8NH95 151 aa4.57□□□□□ -1.68
BRCA1-216ENST00000484087 K7ERU9 68 aa4.56□□□□□ -1.68
BRCA1-216ENST00000484087 HAMPP81172 84 aa4.56□□□□□ -1.68
BRCA1-216ENST00000484087 HIGD2BQ4VC39 106 aa4.56□□□□□ -1.68
BRCA1-216ENST00000484087 KRTAP26-1Q6PEX3 210 aa4.56□□□□□ -1.68
BRCA1-216ENST00000484087 J3QR89 54 aa4.56□□□□□ -1.68
BRCA1-216ENST00000484087 LECT2O14960 151 aa4.56□□□□□ -1.68
BRCA1-216ENST00000484087 WFDC2Q14508 124 aa4.56□□□□□ -1.68
BRCA1-216ENST00000484087 C9orf116Q5BN46 136 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-216ENST00000484087 LINC00526Q96FQ7 95 aa4.56□□□□□ -1.68
BRCA1-216ENST00000484087 IGKV2-28A0A075B6P5 120 aa4.55□□□□□ -1.68
BRCA1-216ENST00000484087 C9JAW5 83 aa4.55□□□□□ -1.68
BRCA1-216ENST00000484087 IGKV2D-28P01615 120 aa4.55□□□□□ -1.68
BRCA1-216ENST00000484087 RPL28P46779 137 aaKnown RBP4.55□□□□□ -1.68
BRCA1-216ENST00000484087 LINC01620Q4KN68 170 aa4.55□□□□□ -1.68
BRCA1-216ENST00000484087 C10orf25Q5T742 122 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms