RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 Q96NJ1 140 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 CCL19Q99731 98 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 PAPPAQ13219 1627 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 ADCY10Q96PN6 1610 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 ANKRD36CQ5JPF3 1778 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 MAST1Q9Y2H9 1570 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 COL6A6A6NMZ7 2263 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 NUP188Q5SRE5 1749 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 ABCC6O95255 1503 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 ZMYM4Q5VZL5 1548 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 KIAA0586Q9BVV6 1533 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 MROH2AA6NES4 1674 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 ITSN2Q9NZM3 1697 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 ZNF236Q9UL36 1845 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 CD163L1Q9NR16 1453 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 KIAA0556O60303 1618 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 A0A087WTM6 91 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 ETDCA0A1B0GVM5 59 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 I3L3M4 83 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 M0R1W7 72 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 NDUFA4O00483 81 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 COX7BP24311 80 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 SPINK7P58062 85 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 SSBP3-AS1Q7Z2R9 100 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 PLAC8Q9NZF1 115 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 NCOA6Q14686 2063 aaPredicted RBP0.69□□□□□ -2.3
NPHP3-207ENST00000476742 ARHGEF5Q12774 1597 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 TIAM2Q8IVF5 1701 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 AGLP35573 1532 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 KIF1AQ12756 1690 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 CTTNBP2Q8WZ74 1663 aa0.69□□□□□ -2.3
NPHP3-207ENST00000476742 LRP6O75581 1613 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 NESP48681 1621 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 BIVM-ERCC5R4GMW8 1640 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 SPTY2D1-AS1A0A0U1RR47 76 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 LCE6AA0A183 80 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 SPINK4O60575 86 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 FXYD6P3P58550 94 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 SNRPGP62308 76 aaKnown RBP0.68□□□□□ -2.3
NPHP3-207ENST00000476742 IQGAP2Q13576 1575 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 DEFB114Q30KQ6 69 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 RICTORQ6R327 1708 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 C10orf99Q6UWK7 81 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 PKD1L3Q7Z443 1732 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 UBE2DNLQ8IWF7 75 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 INTS1Q8N201 2190 aaKnown RBP0.68□□□□□ -2.3
NPHP3-207ENST00000476742 OBSCN-AS1Q96MR7 158 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 LINC00472Q9H8W2 130 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 BRWD1Q9NSI6 2320 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 FMN2Q9NZ56 1722 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 CRIPTQ9P021 101 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 C5P01031 1676 aa0.68□□□□□ -2.3
NPHP3-207ENST00000476742 COL14A1Q05707 1796 aaKnown RBP0.68□□□□□ -2.3
NPHP3-207ENST00000476742 ABCC8Q09428 1581 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 SAMD9Q5K651 1589 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 CEP170BQ9Y4F5 1589 aaPredicted RBP0.67□□□□□ -2.3
NPHP3-207ENST00000476742 TNCP24821 2201 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 CPSF4LA6NMK7 179 aaKnown RBP0.67□□□□□ -2.3
NPHP3-207ENST00000476742 NDUFA3O95167 84 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 PRB3Q04118 309 aaPredicted RBP0.67□□□□□ -2.3
NPHP3-207ENST00000476742 LINC00575Q6W349 94 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 USMG5Q96IX5 58 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 TMEM167BQ9NRX6 74 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 WIZO95785 1651 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 SCN7AQ01118 1682 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 BCORQ6W2J9 1755 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 PAPPA2Q9BXP8 1791 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 ABCA5Q8WWZ7 1642 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 CICQ96RK0 1608 aaPredicted RBP0.67□□□□□ -2.3
NPHP3-207ENST00000476742 PHRF1Q9P1Y6 1649 aaKnown RBP0.67□□□□□ -2.3
NPHP3-207ENST00000476742 LRRC37A2A6NM11 1700 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 TJP1Q07157 1748 aa0.67□□□□□ -2.3
NPHP3-207ENST00000476742 C3P01024 1663 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 TRPM2O94759 1503 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 TULP4Q9NRJ4 1543 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 A0A096LNT2 108 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 GVQW2A0A096LPI5 108 aaPredicted RBP0.66□□□□□ -2.3
NPHP3-207ENST00000476742 LINC00959A0A1B0GUT2 108 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 LINC01546A6NGU7 62 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 IGIPA6NJ69 53 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 KCNQ1DNQ9H478 68 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 NHSL1Q5SYE7 1610 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 EIF2AK4Q9P2K8 1649 aaKnown RBP0.66□□□□□ -2.3
NPHP3-207ENST00000476742 ALKQ9UM73 1620 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 MED13LQ71F56 2210 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 POLR1AO95602 1720 aaPredicted RBP0.66□□□□□ -2.3
NPHP3-207ENST00000476742 NWD1Q149M9 1564 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 ERCC6L2Q5T890 1561 aa0.66□□□□□ -2.3
NPHP3-207ENST00000476742 COL4A5P29400 1685 aa0.65□□□□□ -2.3
NPHP3-207ENST00000476742 ZFHX2Q9C0A1 2572 aaPredicted RBP0.65□□□□□ -2.3
NPHP3-207ENST00000476742 CDC42BPAQ5VT25 1732 aa0.65□□□□□ -2.31
NPHP3-207ENST00000476742 DEFB131BA0A096LNP1 70 aa0.65□□□□□ -2.31
NPHP3-207ENST00000476742 LY6G6CO95867 125 aa0.65□□□□□ -2.31
NPHP3-207ENST00000476742 COX6B1P14854 86 aa0.65□□□□□ -2.31
NPHP3-207ENST00000476742 PIGYQ3MUY2 71 aa0.65□□□□□ -2.31
NPHP3-207ENST00000476742 FAM208AQ9UK61 1670 aaKnown RBP0.65□□□□□ -2.31
NPHP3-207ENST00000476742 A0A0G2JMZ2 1700 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 PARP4Q9UKK3 1724 aaKnown RBP0.64□□□□□ -2.31
NPHP3-207ENST00000476742 G3V318 75 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 CCL22O00626 93 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms