RNA–Protein interactions for RNA: ENST00000475970.1

TRA2A-205, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-205ENST00000475970 SVBPQ8N300 66 aa-0.85□□□□□ -2.55
TRA2A-205ENST00000475970 MARF1Q9Y4F3 1742 aaKnown RBP-0.85□□□□□ -2.55
TRA2A-205ENST00000475970 AP4S1Q9Y587 144 aa-0.85□□□□□ -2.55
TRA2A-205ENST00000475970 KNL1Q8NG31 2342 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 NUP188Q5SRE5 1749 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 KIAA1551Q9HCM1 1747 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 PSME4Q14997 1843 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 A0A087WVE0 104 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 C7orf77A4D0Y5 90 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 OOSP1A8MZH6 123 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 SFTA2Q6UW10 78 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 TSC22D3Q99576 134 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 DPH3P1Q9H4G8 78 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 DYNC1H1Q14204 4646 aaKnown RBP-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 TOP2BQ02880 1626 aa-0.86□□□□□ -2.55
TRA2A-205ENST00000475970 RPL38P63173 70 aaKnown RBP-0.87□□□□□ -2.55
TRA2A-205ENST00000475970 DEFA5Q01523 94 aa-0.87□□□□□ -2.55
TRA2A-205ENST00000475970 PSMG4Q5JS54 123 aa-0.87□□□□□ -2.55
TRA2A-205ENST00000475970 MBD5Q9P267 1494 aa-0.87□□□□□ -2.55
TRA2A-205ENST00000475970 DNAH11Q96DT5 4516 aa-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 APOBP04114 4563 aaKnown RBP-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 ABCC2Q92887 1545 aa-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 K7EP34 96 aa-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 NDUFC1O43677 76 aa-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 PMCHL1Q16048 86 aa-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 DEFB107AQ8IZN7 70 aa-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 SCN7AQ01118 1682 aa-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 LAMA1P25391 3075 aa-0.88□□□□□ -2.55
TRA2A-205ENST00000475970 HTTP42858 3142 aa-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 CELSR3Q9NYQ7 3312 aa-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 PHLPP1O60346 1717 aa-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 TCHHQ07283 1943 aa-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.89□□□□□ -2.554e-10■■■□□ 15.2
TRA2A-205ENST00000475970 H7BZZ5 65 aa-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 SNAPC5O75971 98 aa-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 IER3IP1Q9Y5U9 82 aa-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 ANKRD11Q6UB99 2663 aaPredicted RBP-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 AKAP13Q12802 2813 aa-0.89□□□□□ -2.55
TRA2A-205ENST00000475970 CUBNO60494 3623 aa-0.9□□□□□ -2.55
TRA2A-205ENST00000475970 MGAM2Q2M2H8 2515 aa-0.9□□□□□ -2.55
TRA2A-205ENST00000475970 MYOM2P54296 1465 aa-0.9□□□□□ -2.55
TRA2A-205ENST00000475970 MPC2O95563 127 aa-0.9□□□□□ -2.55
TRA2A-205ENST00000475970 MT1HP80294 61 aa-0.9□□□□□ -2.55
TRA2A-205ENST00000475970 ALKAL2Q6UX46 152 aa-0.9□□□□□ -2.55
TRA2A-205ENST00000475970 ARHGAP5Q13017 1502 aa-0.9□□□□□ -2.55
TRA2A-205ENST00000475970 SACSQ9NZJ4 4579 aa-0.91□□□□□ -2.55
TRA2A-205ENST00000475970 TRBV25-1A0A075B6N4 114 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 K7EP13 123 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 GNG4P50150 75 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 HMGN3Q15651 99 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 TARBP1Q13395 1621 aaKnown RBP-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 ACACAQ13085 2346 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 CUX1P39880 1505 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 MTORP42345 2549 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 MYH7P12883 1935 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 SAMD9Q5K651 1589 aa-0.91□□□□□ -2.56
TRA2A-205ENST00000475970 COL14A1Q05707 1796 aaKnown RBP-0.92□□□□□ -2.56
TRA2A-205ENST00000475970 UQCRHP07919 91 aa-0.92□□□□□ -2.56
TRA2A-205ENST00000475970 HSD52Q0P140 79 aa-0.92□□□□□ -2.56
TRA2A-205ENST00000475970 LELP1Q5T871 98 aa-0.92□□□□□ -2.56
TRA2A-205ENST00000475970 CACFD1Q9UGQ2 172 aa-0.92□□□□□ -2.56
TRA2A-205ENST00000475970 ROBO1Q9Y6N7 1651 aa-0.92□□□□□ -2.56
TRA2A-205ENST00000475970 PDCD11Q14690 1871 aaKnown RBP-0.92□□□□□ -2.56
TRA2A-205ENST00000475970 BCORQ6W2J9 1755 aa-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 NIPBLQ6KC79 2804 aaeCLIP-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 TMEM218A2RU14 115 aa-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 NDUFA2O43678 99 aa-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 PPP3R1P63098 170 aa-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 USP9XQ93008 2570 aaPredicted RBP-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 NRKQ7Z2Y5 1582 aa-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 ZFHX3Q15911 3703 aa-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 CMYA5Q8N3K9 4069 aa-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 VPS13BQ7Z7G8 4022 aa-0.93□□□□□ -2.56
TRA2A-205ENST00000475970 SHPRHQ149N8 1683 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 TRANK1O15050 2925 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 PDE4DIPQ5VU43 2346 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 LOC105371267A0A1B0GV96 52 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 C3orf79P0CE67 100 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 S100A12P80511 92 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 ZNF720Q7Z2F6 126 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 PRRC2CQ9Y520 2896 aaKnown RBP-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 LRRC9Q6ZRR7 1453 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 RAPGEF2Q9Y4G8 1499 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 FAM135AQ9P2D6 1515 aa-0.94□□□□□ -2.56
TRA2A-205ENST00000475970 ROCK2O75116 1388 aaKnown RBP-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 ALKQ9UM73 1620 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 MRPS10P82664 201 aaKnown RBP-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 UBE2D4Q9Y2X8 147 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 S4R3F8 94 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 MLH3Q9UHC1 1453 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 PREX1Q8TCU6 1659 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 MAP3K1Q13233 1512 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 WDR87Q6ZQQ6 2873 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 KNDC1Q76NI1 1749 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 COL12A1Q99715 3063 aa-0.95□□□□□ -2.56
TRA2A-205ENST00000475970 EIF4G3O43432 1585 aaKnown RBP-0.96□□□□□ -2.56
TRA2A-205ENST00000475970 RGPD8O14715 1765 aaPredicted RBP-0.96□□□□□ -2.56
TRA2A-205ENST00000475970 RGPD5Q99666 1765 aa-0.96□□□□□ -2.56
TRA2A-205ENST00000475970 DSPP15924 2871 aaKnown RBP-0.96□□□□□ -2.56
TRA2A-205ENST00000475970 DNAH1Q9P2D7 4330 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms