RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 KLK5Q9Y337 293 aaPredicted RBP3.88□□□□□ -1.79
HDAC8-216ENST00000470998 NACAE9PAV3 2078 aa3.87□□□□□ -1.79
HDAC8-216ENST00000470998 LST1O00453 97 aa3.87□□□□□ -1.79
HDAC8-216ENST00000470998 TRACP01848 142 aa3.87□□□□□ -1.79
HDAC8-216ENST00000470998 ANGP03950 147 aaKnown RBP3.87□□□□□ -1.79
HDAC8-216ENST00000470998 CKS1BP61024 79 aa3.87□□□□□ -1.79
HDAC8-216ENST00000470998 REG3AQ06141 175 aa3.87□□□□□ -1.79
HDAC8-216ENST00000470998 ETDBQ3ZM63 59 aa3.87□□□□□ -1.79
HDAC8-216ENST00000470998 ANKRD29Q8N6D5 301 aa3.87□□□□□ -1.79
HDAC8-216ENST00000470998 NBEAL2Q6ZNJ1 2754 aa3.87□□□□□ -1.79
HDAC8-216ENST00000470998 HYDINQ4G0P3 5121 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 A0A096LPF7 62 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 A0A0J9YWU9 116 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 A0A1B0GX51 115 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 C9JAW5 83 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 H0YGX0 51 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 SCGB1A1P11684 91 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
HDAC8-216ENST00000470998 XCL1P47992 114 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 LINC00158P58513 81 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 MIR7-3HGQ8N6C7 128 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 CHCHD10Q8WYQ3 142 aaPredicted RBP3.86□□□□□ -1.79
HDAC8-216ENST00000470998 SND1-IT1Q9HBX3 110 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 TOMM7Q9P0U1 55 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 CELA1Q9UNI1 258 aa3.86□□□□□ -1.79
HDAC8-216ENST00000470998 TENM2Q9NT68 2774 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 LYSTQ99698 3801 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 GVQW2A0A096LPI5 108 aaPredicted RBP3.85□□□□□ -1.79
HDAC8-216ENST00000470998 IGKV3OR2-268A0A0C4DH90 116 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 FAM240AA0A1B0GVK7 77 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 H7C2G1 150 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 SNCGO76070 127 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 C5orf38Q86SI9 138 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 LINC00269Q8N2A0 174 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 C15orf53Q8NAA6 179 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 EPPK1P58107 5090 aaKnown RBP3.85□□□□□ -1.79
HDAC8-216ENST00000470998 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
HDAC8-216ENST00000470998 H3BQ85 93 aa3.84□□□□□ -1.79
HDAC8-216ENST00000470998 LY6G6CO95867 125 aa3.84□□□□□ -1.79
HDAC8-216ENST00000470998 C2orf82Q6UX34 121 aa3.84□□□□□ -1.79
HDAC8-216ENST00000470998 SOSTDC1Q6X4U4 206 aa3.84□□□□□ -1.79
HDAC8-216ENST00000470998 C11orf45Q8TAV5 145 aa3.84□□□□□ -1.79
HDAC8-216ENST00000470998 UBE2WQ96B02 151 aa3.84□□□□□ -1.79
HDAC8-216ENST00000470998 TRAV10A0A0B4J240 114 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 DEFB4AO15263 64 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 DNAL4O96015 105 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 ACYP1P07311 99 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 INAFM2P0DMQ5 153 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 HTN3P15516 51 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 CCL18P55774 89 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 SPAG11BQ08648 103 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 KIAA0087Q14695 138 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 LINC01556Q5JQF7 62 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 LYPD5Q6UWN5 251 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 DAND5Q8N907 189 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 NTN5Q8WTR8 489 aaPredicted RBP3.83□□□□□ -1.8
HDAC8-216ENST00000470998 TMEM126AQ9H061 195 aa3.83□□□□□ -1.8
HDAC8-216ENST00000470998 NPC2P61916 151 aa3.82□□□□□ -1.8
HDAC8-216ENST00000470998 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
HDAC8-216ENST00000470998 SIGMAR1Q99720 223 aa3.82□□□□□ -1.8
HDAC8-216ENST00000470998 IGKV2-28A0A075B6P5 120 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 DEFB131BA0A096LNP1 70 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 A0A0U1RRA0 63 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 IGKV2D-28P01615 120 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 PFN2P35080 140 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 PCP4P48539 62 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 CLPSL2Q6UWE3 100 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 Q6ZTC4 211 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 MTURNQ8N3F0 131 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 LINC00337Q8N6G1 96 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 RMI2Q96E14 147 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 CSMD3Q7Z407 3707 aa3.81□□□□□ -1.8
HDAC8-216ENST00000470998 DNAH10OSP0CZ25 163 aa3.8□□□□□ -1.8
HDAC8-216ENST00000470998 NANOS2P60321 138 aaKnown RBP3.8□□□□□ -1.8
HDAC8-216ENST00000470998 ENHOQ6UWT2 76 aa3.8□□□□□ -1.8
HDAC8-216ENST00000470998 KLK12Q9UKR0 248 aa3.8□□□□□ -1.8
HDAC8-216ENST00000470998 SMIM11BQ8TCY0 68 aa3.79□□□□□ -1.8
HDAC8-216ENST00000470998 CLEC2BQ92478 149 aa3.79□□□□□ -1.8
HDAC8-216ENST00000470998 UPK3BQ9BT76 320 aa3.79□□□□□ -1.8
HDAC8-216ENST00000470998 APLNQ9ULZ1 77 aa3.79□□□□□ -1.8
HDAC8-216ENST00000470998 IGLV10-54A0A075B6I4 117 aa3.78□□□□□ -1.8
HDAC8-216ENST00000470998 TRBV7-6A0A0J9YX20 115 aa3.78□□□□□ -1.8
HDAC8-216ENST00000470998 Q6Q795 121 aa3.78□□□□□ -1.8
HDAC8-216ENST00000470998 LINC00336Q6ZUF6 198 aa3.78□□□□□ -1.8
HDAC8-216ENST00000470998 WFDC10BQ8IUB3 73 aa3.78□□□□□ -1.8
HDAC8-216ENST00000470998 OR13C6PQ8NH95 151 aa3.78□□□□□ -1.8
HDAC8-216ENST00000470998 ORMDL1Q9P0S3 153 aa3.78□□□□□ -1.8
HDAC8-216ENST00000470998 JMJD7-PLA2G4BH0Y9G9 81 aa3.77□□□□□ -1.81
HDAC8-216ENST00000470998 BAALC-AS2P0C853 105 aa3.77□□□□□ -1.81
HDAC8-216ENST00000470998 ESRGQ1W209 222 aa3.77□□□□□ -1.81
HDAC8-216ENST00000470998 S100A7L2Q5SY68 101 aa3.77□□□□□ -1.81
HDAC8-216ENST00000470998 LINC00167Q96N53 147 aa3.77□□□□□ -1.81
HDAC8-216ENST00000470998 CAMK2N2Q96S95 79 aa3.77□□□□□ -1.81
HDAC8-216ENST00000470998 DNAH6Q9C0G6 4158 aa3.77□□□□□ -1.81
HDAC8-216ENST00000470998 TEX49A0A1B0GTD5 131 aa3.76□□□□□ -1.81
HDAC8-216ENST00000470998 NDUFC2-KCTD14E9PQ53 114 aa3.76□□□□□ -1.81
HDAC8-216ENST00000470998 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
HDAC8-216ENST00000470998 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
HDAC8-216ENST00000470998 TLX1NBP0CAT3 122 aa3.76□□□□□ -1.81
HDAC8-216ENST00000470998 KRTAP26-1Q6PEX3 210 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms