RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 MEIG1Q5JSS6 88 aa10.57□□□□□ -0.72
SCARNA2-201ENST00000458748 MAP1LC3CQ9BXW4 147 aa10.57□□□□□ -0.72
SCARNA2-201ENST00000458748 MYMXA0A1B0GTQ4 84 aa10.56□□□□□ -0.72
SCARNA2-201ENST00000458748 SCO1O75880 301 aa10.56□□□□□ -0.72
SCARNA2-201ENST00000458748 DPM2O94777 84 aa10.56□□□□□ -0.72
SCARNA2-201ENST00000458748 VPREB1P12018 145 aa10.56□□□□□ -0.72
SCARNA2-201ENST00000458748 UBE2AP49459 152 aa10.56□□□□□ -0.72
SCARNA2-201ENST00000458748 PRR26Q8N8Z3 221 aa10.56□□□□□ -0.72
SCARNA2-201ENST00000458748 IGKV2-28A0A075B6P5 120 aa10.55□□□□□ -0.72
SCARNA2-201ENST00000458748 IGKV2D-28P01615 120 aa10.55□□□□□ -0.72
SCARNA2-201ENST00000458748 PLEKHB2Q96CS7 222 aa10.55□□□□□ -0.72
SCARNA2-201ENST00000458748 NDUFA12Q9UI09 145 aa10.55□□□□□ -0.72
SCARNA2-201ENST00000458748 A0A0U1RRA0 63 aa10.53□□□□□ -0.72
SCARNA2-201ENST00000458748 LEPROTO15243 131 aa10.53□□□□□ -0.72
SCARNA2-201ENST00000458748 IGKCP01834 107 aa10.52□□□□□ -0.73
SCARNA2-201ENST00000458748 KRTAP1-4P0C5Y4 121 aa10.52□□□□□ -0.73
SCARNA2-201ENST00000458748 SMIM13P0DJ93 91 aa10.52□□□□□ -0.73
SCARNA2-201ENST00000458748 NMUP48645 174 aa10.51□□□□□ -0.73
SCARNA2-201ENST00000458748 LRP2P98164 4655 aa10.51□□□□□ -0.73
SCARNA2-201ENST00000458748 M0R378 163 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BKO60814 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BJP06899 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 LGALS3P17931 250 aaKnown RBP10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BOP23527 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BBP33778 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BDP58876 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BCP62807 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST2H2BEQ16778 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 MIR7-3HGQ8N6C7 128 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BHQ93079 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BNQ99877 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 HIST1H2BMQ99879 126 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 TMEM126AQ9H061 195 aa10.49□□□□□ -0.73
SCARNA2-201ENST00000458748 J3QQQ9 107 aa10.48□□□□□ -0.73
SCARNA2-201ENST00000458748 S100A12P80511 92 aa10.48□□□□□ -0.73
SCARNA2-201ENST00000458748 FAM19A1Q7Z5A9 133 aa10.48□□□□□ -0.73
SCARNA2-201ENST00000458748 BOD1L2Q8IYS8 172 aa10.48□□□□□ -0.73
SCARNA2-201ENST00000458748 IGKV2D-26A0A0A0MRZ7 120 aa10.47□□□□□ -0.73
SCARNA2-201ENST00000458748 CRYGAP11844 174 aa10.47□□□□□ -0.73
SCARNA2-201ENST00000458748 KRTAP13-1Q8IUC0 172 aa10.46□□□□□ -0.73
SCARNA2-201ENST00000458748 PMCHL2Q9BQD1 86 aa10.46□□□□□ -0.73
SCARNA2-201ENST00000458748 TMEM238C9JI98 176 aa10.45□□□□□ -0.74
SCARNA2-201ENST00000458748 MIEN1Q9BRT3 115 aa10.45□□□□□ -0.74
SCARNA2-201ENST00000458748 SYS1-DBNDD2H3BUS1 97 aa10.44□□□□□ -0.74
SCARNA2-201ENST00000458748 TSPEAR-AS2P59090 65 aa10.43□□□□□ -0.74
SCARNA2-201ENST00000458748 PRLHP81277 87 aa10.43□□□□□ -0.74
SCARNA2-201ENST00000458748 Q8NDZ9 215 aa10.43□□□□□ -0.74
SCARNA2-201ENST00000458748 PRYO14603 147 aa10.42□□□□□ -0.74
SCARNA2-201ENST00000458748 FAM229BQ4G0N7 80 aa10.42□□□□□ -0.74
SCARNA2-201ENST00000458748 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
SCARNA2-201ENST00000458748 E9PLD3 99 aa10.41□□□□□ -0.74
SCARNA2-201ENST00000458748 NCR3O14931 201 aa10.41□□□□□ -0.74
SCARNA2-201ENST00000458748 TYMSOSQ8TAI1 123 aa10.41□□□□□ -0.74
SCARNA2-201ENST00000458748 LOC107984156A0A0G2JMH3 177 aa10.39□□□□□ -0.75
SCARNA2-201ENST00000458748 ARL17AQ8IVW1 177 aa10.39□□□□□ -0.75
SCARNA2-201ENST00000458748 LINC01545Q5VT33 79 aa10.38□□□□□ -0.75
SCARNA2-201ENST00000458748 HIGD2AQ9BW72 106 aa10.38□□□□□ -0.75
SCARNA2-201ENST00000458748 KCNQ1DNQ9H478 68 aa10.38□□□□□ -0.75
SCARNA2-201ENST00000458748 A0A087X002 238 aa10.37□□□□□ -0.75
SCARNA2-201ENST00000458748 TRBV10-2A0A0K0K1G8 114 aa10.37□□□□□ -0.75
SCARNA2-201ENST00000458748 COA6Q5JTJ3 125 aaKnown RBP10.37□□□□□ -0.75
SCARNA2-201ENST00000458748 LINC00337Q8N6G1 96 aa10.37□□□□□ -0.75
SCARNA2-201ENST00000458748 DAND5Q8N907 189 aa10.37□□□□□ -0.75
SCARNA2-201ENST00000458748 ZNF706Q9Y5V0 76 aaPredicted RBP10.37□□□□□ -0.75
SCARNA2-201ENST00000458748 RNF213Q63HN8 5207 aa10.37□□□□□ -0.75
SCARNA2-201ENST00000458748 ETDCA0A1B0GVM5 59 aa10.36□□□□□ -0.75
SCARNA2-201ENST00000458748 C20orf202A1L168 122 aa10.36□□□□□ -0.75
SCARNA2-201ENST00000458748 SPANXB1Q9NS25 103 aaPredicted RBP10.36□□□□□ -0.75
SCARNA2-201ENST00000458748 A0A0J9YXY3 114 aa10.35□□□□□ -0.75
SCARNA2-201ENST00000458748 TRBV10-3A0A0K0K1G6 114 aa10.35□□□□□ -0.75
SCARNA2-201ENST00000458748 NDUFC2O95298 119 aa10.35□□□□□ -0.75
SCARNA2-201ENST00000458748 DDTP30046 118 aa10.34□□□□□ -0.75
SCARNA2-201ENST00000458748 AKR1D1P51857 326 aa10.34□□□□□ -0.75
SCARNA2-201ENST00000458748 S100A7L2Q5SY68 101 aa10.34□□□□□ -0.75
SCARNA2-201ENST00000458748 ANAPC11Q9NYG5 84 aa10.34□□□□□ -0.75
SCARNA2-201ENST00000458748 CBY1Q9Y3M2 126 aa10.34□□□□□ -0.75
SCARNA2-201ENST00000458748 KRTDAPP60985 99 aa10.33□□□□□ -0.76
SCARNA2-201ENST00000458748 C3orf79P0CE67 100 aa10.32□□□□□ -0.76
SCARNA2-201ENST00000458748 SPRR1AP35321 89 aa10.32□□□□□ -0.76
SCARNA2-201ENST00000458748 TIMM17BO60830 172 aa10.3□□□□□ -0.76
SCARNA2-201ENST00000458748 S100A1P23297 94 aa10.3□□□□□ -0.76
SCARNA2-201ENST00000458748 ZNF815PA8K554 130 aa10.29□□□□□ -0.76
SCARNA2-201ENST00000458748 TSPAN13O95857 204 aa10.29□□□□□ -0.76
SCARNA2-201ENST00000458748 PRR4Q16378 134 aa10.29□□□□□ -0.76
SCARNA2-201ENST00000458748 LINC00304Q8N9R0 145 aa10.29□□□□□ -0.76
SCARNA2-201ENST00000458748 NPC2P61916 151 aa10.28□□□□□ -0.76
SCARNA2-201ENST00000458748 CTAG1AP78358 180 aa10.28□□□□□ -0.76
SCARNA2-201ENST00000458748 KRTAP13-2Q52LG2 175 aa10.28□□□□□ -0.76
SCARNA2-201ENST00000458748 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
SCARNA2-201ENST00000458748 SPRR4Q96PI1 79 aa10.28□□□□□ -0.76
SCARNA2-201ENST00000458748 KRTAP4-16G5E9R7 235 aaPredicted RBP10.27□□□□□ -0.77
SCARNA2-201ENST00000458748 IGLV6-57P01721 117 aa10.27□□□□□ -0.77
SCARNA2-201ENST00000458748 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.77
SCARNA2-201ENST00000458748 TRAV23DV6A0A075B6W5 121 aa10.26□□□□□ -0.77
SCARNA2-201ENST00000458748 SMCR5Q8TEV8 140 aa10.26□□□□□ -0.77
SCARNA2-201ENST00000458748 COPS9Q8WXC6 57 aa10.26□□□□□ -0.77
SCARNA2-201ENST00000458748 SPANXCQ9NY87 97 aa10.26□□□□□ -0.77
SCARNA2-201ENST00000458748 B5MCH6 92 aa10.25□□□□□ -0.77
SCARNA2-201ENST00000458748 HINT1P49773 126 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms