RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 LINC00167Q96N53 147 aa9.03□□□□□ -0.96
HDAC4-204ENST00000446876 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
HDAC4-204ENST00000446876 IGKCP01834 107 aa9.02□□□□□ -0.97
HDAC4-204ENST00000446876 LINC00158P58513 81 aa9.02□□□□□ -0.97
HDAC4-204ENST00000446876 NKAPP1Q8N9T2 125 aa9.02□□□□□ -0.97
HDAC4-204ENST00000446876 SMIM13P0DJ93 91 aa9.01□□□□□ -0.97
HDAC4-204ENST00000446876 VPREB1P12018 145 aa9.01□□□□□ -0.97
HDAC4-204ENST00000446876 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
HDAC4-204ENST00000446876 LEPROTO15243 131 aa9□□□□□ -0.97
HDAC4-204ENST00000446876 ATP6V1G1O75348 118 aa9□□□□□ -0.97
HDAC4-204ENST00000446876 MEIG1Q5JSS6 88 aa9□□□□□ -0.97
HDAC4-204ENST00000446876 H0Y9J4 135 aa8.99□□□□□ -0.97
HDAC4-204ENST00000446876 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
HDAC4-204ENST00000446876 DIRC1Q969H9 104 aa8.99□□□□□ -0.97
HDAC4-204ENST00000446876 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
HDAC4-204ENST00000446876 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
HDAC4-204ENST00000446876 HERVK_113P61574 105 aa8.98□□□□□ -0.97
HDAC4-204ENST00000446876 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
HDAC4-204ENST00000446876 PLEKHB2Q96CS7 222 aa8.98□□□□□ -0.97
HDAC4-204ENST00000446876 MYMXA0A1B0GTQ4 84 aa8.97□□□□□ -0.97
HDAC4-204ENST00000446876 J3QQQ9 107 aa8.97□□□□□ -0.97
HDAC4-204ENST00000446876 S100A1P23297 94 aa8.97□□□□□ -0.97
HDAC4-204ENST00000446876 HERV-K104P63124 156 aa8.97□□□□□ -0.97
HDAC4-204ENST00000446876 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
HDAC4-204ENST00000446876 ZNF861PO60384 105 aa8.95□□□□□ -0.98
HDAC4-204ENST00000446876 BCE1O60756 84 aa8.95□□□□□ -0.98
HDAC4-204ENST00000446876 C3orf79P0CE67 100 aa8.95□□□□□ -0.98
HDAC4-204ENST00000446876 LGALS3P17931 250 aaKnown RBP8.95□□□□□ -0.98
HDAC4-204ENST00000446876 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
HDAC4-204ENST00000446876 RPL24P83731 157 aaKnown RBP8.95□□□□□ -0.98
HDAC4-204ENST00000446876 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
HDAC4-204ENST00000446876 HMCN2Q8NDA2 5059 aa8.94□□□□□ -0.98
HDAC4-204ENST00000446876 KRTDAPP60985 99 aa8.94□□□□□ -0.98
HDAC4-204ENST00000446876 PET117Q6UWS5 81 aa8.94□□□□□ -0.98
HDAC4-204ENST00000446876 DAND5Q8N907 189 aa8.94□□□□□ -0.98
HDAC4-204ENST00000446876 IGLV1-50A0A075B6I6 118 aa8.93□□□□□ -0.98
HDAC4-204ENST00000446876 TMEM238C9JI98 176 aa8.93□□□□□ -0.98
HDAC4-204ENST00000446876 KRTAP1-4P0C5Y4 121 aa8.93□□□□□ -0.98
HDAC4-204ENST00000446876 BOD1L2Q8IYS8 172 aa8.93□□□□□ -0.98
HDAC4-204ENST00000446876 PRR26Q8N8Z3 221 aa8.93□□□□□ -0.98
HDAC4-204ENST00000446876 E9PLD3 99 aa8.92□□□□□ -0.98
HDAC4-204ENST00000446876 NCR3O14931 201 aa8.91□□□□□ -0.98
HDAC4-204ENST00000446876 RPL28P46779 137 aaKnown RBP8.91□□□□□ -0.98
HDAC4-204ENST00000446876 NMUP48645 174 aa8.91□□□□□ -0.98
HDAC4-204ENST00000446876 LINC00587B1AMM8 73 aa8.9□□□□□ -0.98
HDAC4-204ENST00000446876 UBE2AP49459 152 aa8.9□□□□□ -0.98
HDAC4-204ENST00000446876 TMEM126AQ9H061 195 aa8.9□□□□□ -0.98
HDAC4-204ENST00000446876 M0R378 163 aa8.89□□□□□ -0.99
HDAC4-204ENST00000446876 PRLHP81277 87 aa8.89□□□□□ -0.99
HDAC4-204ENST00000446876 KRTAP13-1Q8IUC0 172 aa8.89□□□□□ -0.99
HDAC4-204ENST00000446876 IGKV2D-26A0A0A0MRZ7 120 aa8.88□□□□□ -0.99
HDAC4-204ENST00000446876 A0A0J9YXY3 114 aa8.88□□□□□ -0.99
HDAC4-204ENST00000446876 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
HDAC4-204ENST00000446876 NPC2P61916 151 aa8.87□□□□□ -0.99
HDAC4-204ENST00000446876 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
HDAC4-204ENST00000446876 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
HDAC4-204ENST00000446876 ATOH7Q8N100 152 aa8.86□□□□□ -0.99
HDAC4-204ENST00000446876 EIF4EBP3O60516 100 aaPredicted RBP8.85□□□□□ -0.99
HDAC4-204ENST00000446876 SOSTDC1Q6X4U4 206 aa8.85□□□□□ -0.99
HDAC4-204ENST00000446876 HIST3H2BBQ8N257 126 aa8.85□□□□□ -0.99
HDAC4-204ENST00000446876 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
HDAC4-204ENST00000446876 C20orf202A1L168 122 aa8.84□□□□□ -0.99
HDAC4-204ENST00000446876 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
HDAC4-204ENST00000446876 TRBV10-3A0A0K0K1G6 114 aa8.83□□□□□ -1
HDAC4-204ENST00000446876 ZNF815PA8K554 130 aa8.83□□□□□ -1
HDAC4-204ENST00000446876 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
HDAC4-204ENST00000446876 MIEN1Q9BRT3 115 aa8.83□□□□□ -1
HDAC4-204ENST00000446876 ANAPC11Q9NYG5 84 aa8.83□□□□□ -1
HDAC4-204ENST00000446876 PRYO14603 147 aa8.82□□□□□ -1
HDAC4-204ENST00000446876 LITAFQ99732 161 aa8.82□□□□□ -1
HDAC4-204ENST00000446876 HIST1H2BLQ99880 126 aa8.82□□□□□ -1
HDAC4-204ENST00000446876 A0A087X002 238 aa8.81□□□□□ -1
HDAC4-204ENST00000446876 S100A2P29034 98 aa8.8□□□□□ -1
HDAC4-204ENST00000446876 HIGD2AQ9BW72 106 aa8.8□□□□□ -1
HDAC4-204ENST00000446876 KCNQ1DNQ9H478 68 aa8.8□□□□□ -1
HDAC4-204ENST00000446876 S100A6P06703 90 aa8.79□□□□□ -1
HDAC4-204ENST00000446876 SPANXB1Q9NS25 103 aaPredicted RBP8.79□□□□□ -1
HDAC4-204ENST00000446876 TRBV10-2A0A0K0K1G8 114 aa8.78□□□□□ -1
HDAC4-204ENST00000446876 DDTP30046 118 aa8.78□□□□□ -1
HDAC4-204ENST00000446876 SPRR1AP35321 89 aa8.78□□□□□ -1
HDAC4-204ENST00000446876 RPL13AP40429 203 aaKnown RBP8.78□□□□□ -1
HDAC4-204ENST00000446876 KRTAP4-16G5E9R7 235 aaPredicted RBP8.77□□□□□ -1.01
HDAC4-204ENST00000446876 TIMM17BO60830 172 aa8.77□□□□□ -1.01
HDAC4-204ENST00000446876 NDUFC2O95298 119 aa8.77□□□□□ -1.01
HDAC4-204ENST00000446876 SNRPEP62304 92 aaKnown RBP8.77□□□□□ -1.01
HDAC4-204ENST00000446876 LINC00308Q8TCZ7 52 aa8.77□□□□□ -1.01
HDAC4-204ENST00000446876 ETDCA0A1B0GVM5 59 aa8.76□□□□□ -1.01
HDAC4-204ENST00000446876 CRYGAP11844 174 aa8.76□□□□□ -1.01
HDAC4-204ENST00000446876 KRTAP13-2Q52LG2 175 aa8.76□□□□□ -1.01
HDAC4-204ENST00000446876 PCP2Q8IVA1 136 aa8.76□□□□□ -1.01
HDAC4-204ENST00000446876 LINC00337Q8N6G1 96 aa8.76□□□□□ -1.01
HDAC4-204ENST00000446876 IGLV6-57P01721 117 aa8.75□□□□□ -1.01
HDAC4-204ENST00000446876 S100A7L2Q5SY68 101 aa8.75□□□□□ -1.01
HDAC4-204ENST00000446876 SCGB1D4Q6XE38 83 aa8.74□□□□□ -1.01
HDAC4-204ENST00000446876 S100A12P80511 92 aa8.73□□□□□ -1.01
HDAC4-204ENST00000446876 TYMSOSQ8TAI1 123 aa8.73□□□□□ -1.01
HDAC4-204ENST00000446876 SPANXCQ9NY87 97 aa8.73□□□□□ -1.01
HDAC4-204ENST00000446876 B5MCH6 92 aa8.72□□□□□ -1.01
HDAC4-204ENST00000446876 AKR1D1P51857 326 aa8.72□□□□□ -1.01
HDAC4-204ENST00000446876 FAM229BQ4G0N7 80 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms