RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
HDLBP-220ENST00000442730 HERVK_113P61574 105 aa13.39□□□□□ -0.27
HDLBP-220ENST00000442730 PFN2P35080 140 aa13.38□□□□□ -0.27
HDLBP-220ENST00000442730 PET117Q6UWS5 81 aa13.38□□□□□ -0.27
HDLBP-220ENST00000442730 LINC01545Q5VT33 79 aa13.37□□□□□ -0.27
HDLBP-220ENST00000442730 UBR4Q5T4S7 5183 aa13.36□□□□□ -0.27
HDLBP-220ENST00000442730 IGLV5-37A0A075B6J1 123 aa13.36□□□□□ -0.27
HDLBP-220ENST00000442730 C3orf79P0CE67 100 aa13.36□□□□□ -0.27
HDLBP-220ENST00000442730 TSPEAR-AS2P59090 65 aa13.36□□□□□ -0.27
HDLBP-220ENST00000442730 KRTDAPP60985 99 aa13.36□□□□□ -0.27
HDLBP-220ENST00000442730 PLEKHB2Q96CS7 222 aa13.36□□□□□ -0.27
HDLBP-220ENST00000442730 LEPROTO15243 131 aa13.35□□□□□ -0.27
HDLBP-220ENST00000442730 COX17Q14061 63 aa13.35□□□□□ -0.27
HDLBP-220ENST00000442730 NDUFA12Q9UI09 145 aa13.35□□□□□ -0.27
HDLBP-220ENST00000442730 KRTAP1-4P0C5Y4 121 aa13.34□□□□□ -0.27
HDLBP-220ENST00000442730 LINC00167Q96N53 147 aa13.34□□□□□ -0.27
HDLBP-220ENST00000442730 ZNF861PO60384 105 aa13.33□□□□□ -0.28
HDLBP-220ENST00000442730 GAGE10A6NGK3 116 aa13.32□□□□□ -0.28
HDLBP-220ENST00000442730 RPL37AP8A6NKH3 93 aa13.32□□□□□ -0.28
HDLBP-220ENST00000442730 HERV-K104P63124 156 aa13.32□□□□□ -0.28
HDLBP-220ENST00000442730 PRR26Q8N8Z3 221 aa13.32□□□□□ -0.28
HDLBP-220ENST00000442730 NKAPP1Q8N9T2 125 aa13.32□□□□□ -0.28
HDLBP-220ENST00000442730 SND1-IT1Q9HBX3 110 aa13.32□□□□□ -0.28
HDLBP-220ENST00000442730 MYMXA0A1B0GTQ4 84 aa13.31□□□□□ -0.28
HDLBP-220ENST00000442730 J3QQQ9 107 aa13.31□□□□□ -0.28
HDLBP-220ENST00000442730 S100A6P06703 90 aa13.31□□□□□ -0.28
HDLBP-220ENST00000442730 MEIG1Q5JSS6 88 aa13.31□□□□□ -0.28
HDLBP-220ENST00000442730 HIST3H2BBQ8N257 126 aa13.31□□□□□ -0.28
HDLBP-220ENST00000442730 C20orf202A1L168 122 aa13.3□□□□□ -0.28
HDLBP-220ENST00000442730 BCE1O60756 84 aa13.3□□□□□ -0.28
HDLBP-220ENST00000442730 LGALS3P17931 250 aaKnown RBP13.3□□□□□ -0.28
HDLBP-220ENST00000442730 S100A2P29034 98 aa13.3□□□□□ -0.28
HDLBP-220ENST00000442730 LINC00158P58513 81 aa13.29□□□□□ -0.28
HDLBP-220ENST00000442730 E9PLD3 99 aa13.28□□□□□ -0.28
HDLBP-220ENST00000442730 IGLV1-50A0A075B6I6 118 aa13.27□□□□□ -0.29
HDLBP-220ENST00000442730 A0A0U1RRA0 63 aa13.27□□□□□ -0.29
HDLBP-220ENST00000442730 SMIM13P0DJ93 91 aa13.27□□□□□ -0.29
HDLBP-220ENST00000442730 VPREB1P12018 145 aa13.27□□□□□ -0.29
HDLBP-220ENST00000442730 NMUP48645 174 aa13.27□□□□□ -0.29
HDLBP-220ENST00000442730 HIST1H2BLQ99880 126 aa13.27□□□□□ -0.29
HDLBP-220ENST00000442730 RPL28P46779 137 aaKnown RBP13.26□□□□□ -0.29
HDLBP-220ENST00000442730 Q8NDZ9 215 aa13.25□□□□□ -0.29
HDLBP-220ENST00000442730 LINC00587B1AMM8 73 aa13.24□□□□□ -0.29
HDLBP-220ENST00000442730 LRP2P98164 4655 aa13.23□□□□□ -0.29
HDLBP-220ENST00000442730 IGKV2-28A0A075B6P5 120 aa13.23□□□□□ -0.29
HDLBP-220ENST00000442730 IGKV2D-28P01615 120 aa13.23□□□□□ -0.29
HDLBP-220ENST00000442730 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
HDLBP-220ENST00000442730 KRTAP13-1Q8IUC0 172 aa13.22□□□□□ -0.29
HDLBP-220ENST00000442730 MIR7-3HGQ8N6C7 128 aa13.22□□□□□ -0.29
HDLBP-220ENST00000442730 AKR1D1P51857 326 aa13.2□□□□□ -0.3
HDLBP-220ENST00000442730 SNRPEP62304 92 aaKnown RBP13.2□□□□□ -0.3
HDLBP-220ENST00000442730 ATOH7Q8N100 152 aa13.2□□□□□ -0.3
HDLBP-220ENST00000442730 RPL13AP40429 203 aaKnown RBP13.19□□□□□ -0.3
HDLBP-220ENST00000442730 IGKV2D-26A0A0A0MRZ7 120 aa13.17□□□□□ -0.3
HDLBP-220ENST00000442730 UBE2AP49459 152 aa13.17□□□□□ -0.3
HDLBP-220ENST00000442730 DAND5Q8N907 189 aa13.17□□□□□ -0.3
HDLBP-220ENST00000442730 A0A0J9YXY3 114 aa13.16□□□□□ -0.3
HDLBP-220ENST00000442730 C5orf52A6NGY3 159 aa13.16□□□□□ -0.3
HDLBP-220ENST00000442730 TMEM238C9JI98 176 aa13.16□□□□□ -0.3
HDLBP-220ENST00000442730 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
HDLBP-220ENST00000442730 BOD1L2Q8IYS8 172 aa13.15□□□□□ -0.3
HDLBP-220ENST00000442730 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
HDLBP-220ENST00000442730 ANKRD39Q53RE8 183 aa13.14□□□□□ -0.31
HDLBP-220ENST00000442730 M0R378 163 aa13.13□□□□□ -0.31
HDLBP-220ENST00000442730 TTTY13Q9BZ97 58 aa13.13□□□□□ -0.31
HDLBP-220ENST00000442730 A0A087X002 238 aa13.12□□□□□ -0.31
HDLBP-220ENST00000442730 PRLHP81277 87 aa13.12□□□□□ -0.31
HDLBP-220ENST00000442730 MIEN1Q9BRT3 115 aa13.11□□□□□ -0.31
HDLBP-220ENST00000442730 NCR3O14931 201 aa13.1□□□□□ -0.31
HDLBP-220ENST00000442730 FAM19A1Q7Z5A9 133 aa13.1□□□□□ -0.31
HDLBP-220ENST00000442730 LOC107984156A0A0G2JMH3 177 aa13.07□□□□□ -0.32
HDLBP-220ENST00000442730 TIMM17BO60830 172 aa13.07□□□□□ -0.32
HDLBP-220ENST00000442730 CRYGAP11844 174 aa13.07□□□□□ -0.32
HDLBP-220ENST00000442730 ADAMTSL4-AS1Q5T5F5 129 aa13.07□□□□□ -0.32
HDLBP-220ENST00000442730 ARL17AQ8IVW1 177 aa13.07□□□□□ -0.32
HDLBP-220ENST00000442730 LITAFQ99732 161 aa13.07□□□□□ -0.32
HDLBP-220ENST00000442730 ANAPC11Q9NYG5 84 aa13.07□□□□□ -0.32
HDLBP-220ENST00000442730 NPC2P61916 151 aa13.06□□□□□ -0.32
HDLBP-220ENST00000442730 HSBP1L1C9JCN9 74 aa13.05□□□□□ -0.32
HDLBP-220ENST00000442730 SCGB1D1O95968 90 aa13.04□□□□□ -0.32
HDLBP-220ENST00000442730 SOSTDC1Q6X4U4 206 aa13.04□□□□□ -0.32
HDLBP-220ENST00000442730 SCGB1D4Q6XE38 83 aa13.04□□□□□ -0.32
HDLBP-220ENST00000442730 FAM229BQ4G0N7 80 aa13.03□□□□□ -0.32
HDLBP-220ENST00000442730 PCP2Q8IVA1 136 aa13.03□□□□□ -0.32
HDLBP-220ENST00000442730 SPANXB1Q9NS25 103 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-220ENST00000442730 KRTAP13-2Q52LG2 175 aa13.02□□□□□ -0.33
HDLBP-220ENST00000442730 TYMSOSQ8TAI1 123 aa13.02□□□□□ -0.33
HDLBP-220ENST00000442730 PRYO14603 147 aa13.01□□□□□ -0.33
HDLBP-220ENST00000442730 EIF4EBP3O60516 100 aaPredicted RBP13□□□□□ -0.33
HDLBP-220ENST00000442730 NDUFC2O95298 119 aa13□□□□□ -0.33
HDLBP-220ENST00000442730 TMA7Q9Y2S6 64 aaKnown RBP13□□□□□ -0.33
HDLBP-220ENST00000442730 LPAP08519 4548 aa13□□□□□ -0.33
HDLBP-220ENST00000442730 TRBV10-2A0A0K0K1G8 114 aa12.99□□□□□ -0.33
HDLBP-220ENST00000442730 LINC00308Q8TCZ7 52 aa12.99□□□□□ -0.33
HDLBP-220ENST00000442730 HIGD2AQ9BW72 106 aa12.99□□□□□ -0.33
HDLBP-220ENST00000442730 KCNQ1DNQ9H478 68 aa12.99□□□□□ -0.33
HDLBP-220ENST00000442730 TRBV10-3A0A0K0K1G6 114 aa12.98□□□□□ -0.33
HDLBP-220ENST00000442730 SPRR1AP35321 89 aa12.97□□□□□ -0.33
HDLBP-220ENST00000442730 SPANXDQ9BXN6 97 aa12.97□□□□□ -0.33
HDLBP-220ENST00000442730 SPANXCQ9NY87 97 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms