RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 NDUFC2-KCTD14E9PQ53 114 aa8.53□□□□□ -1.04
TCOF1-205ENST00000439160 Q6ZRU5 148 aa8.53□□□□□ -1.04
TCOF1-205ENST00000439160 LINC00337Q8N6G1 96 aa8.53□□□□□ -1.04
TCOF1-205ENST00000439160 A8MTW9 85 aa8.53□□□□□ -1.04
TCOF1-205ENST00000439160 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
TCOF1-205ENST00000439160 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
TCOF1-205ENST00000439160 M0QXV9 152 aa8.52□□□□□ -1.05
TCOF1-205ENST00000439160 Q8NAQ8 132 aa8.52□□□□□ -1.05
TCOF1-205ENST00000439160 PRO0461Q9UI25 63 aa8.52□□□□□ -1.05
TCOF1-205ENST00000439160 WFDC9Q8NEX5 89 aa8.51□□□□□ -1.05
TCOF1-205ENST00000439160 Q8N814 137 aa8.51□□□□□ -1.05
TCOF1-205ENST00000439160 NOTCH1P46531 2555 aa8.51□□□□□ -1.05
TCOF1-205ENST00000439160 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.5□□□□□ -1.05
TCOF1-205ENST00000439160 MP68P56378 58 aa8.5□□□□□ -1.05
TCOF1-205ENST00000439160 GCN1Q92616 2671 aaKnown RBP8.5□□□□□ -1.05
TCOF1-205ENST00000439160 UBR5O95071 2799 aaPredicted RBP8.49□□□□□ -1.05
TCOF1-205ENST00000439160 TACC2O95359 2948 aa8.49□□□□□ -1.05
TCOF1-205ENST00000439160 IGLV5-45A0A087WSX0 123 aa8.48□□□□□ -1.05
TCOF1-205ENST00000439160 PLAC8L1A1L4L8 177 aa8.48□□□□□ -1.05
TCOF1-205ENST00000439160 C7orf33Q8WU49 177 aa8.48□□□□□ -1.05
TCOF1-205ENST00000439160 ZZEF1O43149 2961 aa8.48□□□□□ -1.05
TCOF1-205ENST00000439160 C2orf48Q96LS8 159 aa8.48□□□□□ -1.05
TCOF1-205ENST00000439160 KRTAP10-3P60369 221 aa8.48□□□□□ -1.05
TCOF1-205ENST00000439160 NDUFC2O95298 119 aa8.47□□□□□ -1.05
TCOF1-205ENST00000439160 CSNK1G2-AS1Q8NCQ2 148 aa8.47□□□□□ -1.05
TCOF1-205ENST00000439160 KRTAP1-1Q07627 177 aa8.47□□□□□ -1.05
TCOF1-205ENST00000439160 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
TCOF1-205ENST00000439160 IMUPQ9GZP8 106 aa8.47□□□□□ -1.05
TCOF1-205ENST00000439160 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
TCOF1-205ENST00000439160 A0A087WVE0 104 aa8.46□□□□□ -1.05
TCOF1-205ENST00000439160 LINC00474Q9P2X8 69 aa8.46□□□□□ -1.06
TCOF1-205ENST00000439160 GIG44P09565 113 aaPredicted RBP8.45□□□□□ -1.06
TCOF1-205ENST00000439160 C10orf25Q5T742 122 aa8.45□□□□□ -1.06
TCOF1-205ENST00000439160 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
TCOF1-205ENST00000439160 SOSTDC1Q6X4U4 206 aa8.45□□□□□ -1.06
TCOF1-205ENST00000439160 C19orf73Q9NVV2 129 aa8.45□□□□□ -1.06
TCOF1-205ENST00000439160 Q6Q795 121 aa8.45□□□□□ -1.06
TCOF1-205ENST00000439160 HRCT1Q6UXD1 115 aa8.45□□□□□ -1.06
TCOF1-205ENST00000439160 IGLV9-49A0A0B4J1Y8 123 aa8.44□□□□□ -1.06
TCOF1-205ENST00000439160 FAM240AA0A1B0GVK7 77 aa8.44□□□□□ -1.06
TCOF1-205ENST00000439160 KALRNO60229 2985 aa8.44□□□□□ -1.06
TCOF1-205ENST00000439160 COX7CP15954 63 aa8.44□□□□□ -1.06
TCOF1-205ENST00000439160 DCHS1Q96JQ0 3298 aa8.43□□□□□ -1.06
TCOF1-205ENST00000439160 LAMA5O15230 3695 aa8.43□□□□□ -1.06
TCOF1-205ENST00000439160 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
TCOF1-205ENST00000439160 DMXL1Q9Y485 3027 aa8.43□□□□□ -1.06
TCOF1-205ENST00000439160 REG3GQ6UW15 175 aa8.43□□□□□ -1.06
TCOF1-205ENST00000439160 SERP2Q8N6R1 65 aa8.42□□□□□ -1.06
TCOF1-205ENST00000439160 C6orf48Q9UBA6 75 aa8.42□□□□□ -1.06
TCOF1-205ENST00000439160 NHLRC4P0CG21 123 aaPredicted RBP8.42□□□□□ -1.06
TCOF1-205ENST00000439160 MRPL55Q7Z7F7 128 aaKnown RBP8.42□□□□□ -1.06
TCOF1-205ENST00000439160 TMEM258P61165 79 aa8.42□□□□□ -1.06
TCOF1-205ENST00000439160 CFAP47Q6ZTR5 3102 aa8.41□□□□□ -1.06
TCOF1-205ENST00000439160 H3BNG1 76 aa8.41□□□□□ -1.06
TCOF1-205ENST00000439160 MDFIQ99750 246 aa8.41□□□□□ -1.06
TCOF1-205ENST00000439160 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
TCOF1-205ENST00000439160 LINC00575Q6W349 94 aa8.4□□□□□ -1.06
TCOF1-205ENST00000439160 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
TCOF1-205ENST00000439160 SNURFQ9Y675 71 aa8.39□□□□□ -1.07
TCOF1-205ENST00000439160 WFDC13Q8IUB5 93 aa8.39□□□□□ -1.07
TCOF1-205ENST00000439160 KRTAP10-11P60412 298 aa8.39□□□□□ -1.07
TCOF1-205ENST00000439160 F8WDY8 70 aa8.38□□□□□ -1.07
TCOF1-205ENST00000439160 C1orf134Q5TEV5 83 aa8.38□□□□□ -1.07
TCOF1-205ENST00000439160 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
TCOF1-205ENST00000439160 PRLHP81277 87 aa8.38□□□□□ -1.07
TCOF1-205ENST00000439160 C22orf24Q9Y442 160 aa8.38□□□□□ -1.07
TCOF1-205ENST00000439160 LINC00588Q9Y4M8 146 aa8.38□□□□□ -1.07
TCOF1-205ENST00000439160 ZNF706Q9Y5V0 76 aaPredicted RBP8.38□□□□□ -1.07
TCOF1-205ENST00000439160 ITPR1Q14643 2758 aa8.37□□□□□ -1.07
TCOF1-205ENST00000439160 FAM236DA0A1B0GTK5 79 aa8.37□□□□□ -1.07
TCOF1-205ENST00000439160 FAM236CP0DP71 79 aa8.37□□□□□ -1.07
TCOF1-205ENST00000439160 LRBAP50851 2863 aa8.36□□□□□ -1.07
TCOF1-205ENST00000439160 NBEAL2Q6ZNJ1 2754 aa8.36□□□□□ -1.07
TCOF1-205ENST00000439160 FAM218AQ96MZ4 157 aa8.35□□□□□ -1.07
TCOF1-205ENST00000439160 LINC00846Q9NV44 126 aa8.35□□□□□ -1.07
TCOF1-205ENST00000439160 Q6JHZ5 121 aa8.35□□□□□ -1.07
TCOF1-205ENST00000439160 LITAFQ99732 161 aa8.34□□□□□ -1.07
TCOF1-205ENST00000439160 BAHCC1Q9P281 2608 aa8.34□□□□□ -1.07
TCOF1-205ENST00000439160 MPLKIPQ8TAP9 179 aa8.34□□□□□ -1.07
TCOF1-205ENST00000439160 NBEAL1Q6ZS30 2694 aa8.34□□□□□ -1.07
TCOF1-205ENST00000439160 PRYO14603 147 aa8.34□□□□□ -1.07
TCOF1-205ENST00000439160 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
TCOF1-205ENST00000439160 SPATA3Q8NHX4 192 aa8.33□□□□□ -1.08
TCOF1-205ENST00000439160 K7EIL1 84 aa8.33□□□□□ -1.08
TCOF1-205ENST00000439160 EIF4EBP3O60516 100 aaPredicted RBP8.33□□□□□ -1.08
TCOF1-205ENST00000439160 ITPR2Q14571 2701 aa8.33□□□□□ -1.08
TCOF1-205ENST00000439160 CR1P17927 2039 aa8.32□□□□□ -1.08
TCOF1-205ENST00000439160 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
TCOF1-205ENST00000439160 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
TCOF1-205ENST00000439160 Q9BRP9 147 aa8.32□□□□□ -1.08
TCOF1-205ENST00000439160 C5orf47Q569G3 176 aa8.31□□□□□ -1.08
TCOF1-205ENST00000439160 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
TCOF1-205ENST00000439160 FAM19A3Q7Z5A8 133 aa8.3□□□□□ -1.08
TCOF1-205ENST00000439160 A0A087WSZ3 146 aa8.3□□□□□ -1.08
TCOF1-205ENST00000439160 TRBV7-7A0A0K0K1E9 115 aa8.29□□□□□ -1.08
TCOF1-205ENST00000439160 CIRBP-AS1Q8TBR5 109 aa8.29□□□□□ -1.08
TCOF1-205ENST00000439160 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
TCOF1-205ENST00000439160 DEFB116Q30KQ4 102 aa8.28□□□□□ -1.08
TCOF1-205ENST00000439160 LINC00612Q8N6U2 182 aa8.28□□□□□ -1.08
TCOF1-205ENST00000439160 DNAH10OSP0CZ25 163 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms