RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 HIVEP1P15822 2718 aa13.09□□□□□ -0.31
FAM239A-202ENST00000438107 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.31
FAM239A-202ENST00000438107 CRYGAP11844 174 aa13.08□□□□□ -0.31
FAM239A-202ENST00000438107 PRR34Q9NV39 138 aa13.08□□□□□ -0.31
FAM239A-202ENST00000438107 UNQ6190/PRO20217Q6UXQ8 127 aa13.08□□□□□ -0.32
FAM239A-202ENST00000438107 C10orf25Q5T742 122 aa13.07□□□□□ -0.32
FAM239A-202ENST00000438107 VWFP04275 2813 aa13.06□□□□□ -0.32
FAM239A-202ENST00000438107 GVQW2A0A096LPI5 108 aaPredicted RBP13.05□□□□□ -0.32
FAM239A-202ENST00000438107 C6orf223Q8N319 242 aa13.05□□□□□ -0.32
FAM239A-202ENST00000438107 hADV29S1A0JD25 119 aa13.05□□□□□ -0.32
FAM239A-202ENST00000438107 CYSRT1A8MQ03 144 aa13.05□□□□□ -0.32
FAM239A-202ENST00000438107 LYPD5Q6UWN5 251 aa13.05□□□□□ -0.32
FAM239A-202ENST00000438107 IGLV6-57P01721 117 aa13.04□□□□□ -0.32
FAM239A-202ENST00000438107 TENM1Q9UKZ4 2725 aa13.04□□□□□ -0.32
FAM239A-202ENST00000438107 A0A087WVE0 104 aa13.03□□□□□ -0.32
FAM239A-202ENST00000438107 H3BQ85 93 aa13.03□□□□□ -0.32
FAM239A-202ENST00000438107 SERP2Q8N6R1 65 aa13.03□□□□□ -0.32
FAM239A-202ENST00000438107 KLK12Q9UKR0 248 aa13.03□□□□□ -0.32
FAM239A-202ENST00000438107 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.33
FAM239A-202ENST00000438107 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
FAM239A-202ENST00000438107 ENHOQ6UWT2 76 aa13.01□□□□□ -0.33
FAM239A-202ENST00000438107 HTN3P15516 51 aa13.01□□□□□ -0.33
FAM239A-202ENST00000438107 TRBV10-3A0A0K0K1G6 114 aa13□□□□□ -0.33
FAM239A-202ENST00000438107 LOC110117498A0A087WWA1 95 aa13□□□□□ -0.33
FAM239A-202ENST00000438107 RBM3P98179 157 aaKnown RBP13□□□□□ -0.33
FAM239A-202ENST00000438107 UBL5Q9BZL1 73 aa13□□□□□ -0.33
FAM239A-202ENST00000438107 Q6ZQT0 140 aa12.98□□□□□ -0.33
FAM239A-202ENST00000438107 NBEAL2Q6ZNJ1 2754 aa12.97□□□□□ -0.33
FAM239A-202ENST00000438107 C6orf48Q9UBA6 75 aa12.96□□□□□ -0.33
FAM239A-202ENST00000438107 WIPF1O43516 503 aa12.96□□□□□ -0.34
FAM239A-202ENST00000438107 UPK3BQ9BT76 320 aa12.95□□□□□ -0.34
FAM239A-202ENST00000438107 LAMTOR3Q9UHA4 124 aa12.94□□□□□ -0.34
FAM239A-202ENST00000438107 ATRQ13535 2644 aa12.94□□□□□ -0.34
FAM239A-202ENST00000438107 TRAV23DV6A0A075B6W5 121 aa12.94□□□□□ -0.34
FAM239A-202ENST00000438107 PDE6GP18545 87 aa12.94□□□□□ -0.34
FAM239A-202ENST00000438107 WFDC9Q8NEX5 89 aa12.94□□□□□ -0.34
FAM239A-202ENST00000438107 DIRC1Q969H9 104 aa12.94□□□□□ -0.34
FAM239A-202ENST00000438107 Q6ZQY7 126 aa12.92□□□□□ -0.34
FAM239A-202ENST00000438107 H3BNG1 76 aa12.91□□□□□ -0.34
FAM239A-202ENST00000438107 TEP1Q99973 2627 aaKnown RBP12.91□□□□□ -0.34
FAM239A-202ENST00000438107 TRBV7-6A0A0J9YX20 115 aa12.91□□□□□ -0.34
FAM239A-202ENST00000438107 GHRHP01286 108 aa12.91□□□□□ -0.34
FAM239A-202ENST00000438107 DSCR8Q96T75 97 aa12.91□□□□□ -0.34
FAM239A-202ENST00000438107 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.9□□□□□ -0.34
FAM239A-202ENST00000438107 FAM19A1Q7Z5A9 133 aa12.89□□□□□ -0.35
FAM239A-202ENST00000438107 TMEM258P61165 79 aa12.88□□□□□ -0.35
FAM239A-202ENST00000438107 XAGE1AQ9HD64 81 aa12.88□□□□□ -0.35
FAM239A-202ENST00000438107 ZNF73O43830 326 aaPredicted RBP12.88□□□□□ -0.35
FAM239A-202ENST00000438107 COX7BP24311 80 aa12.87□□□□□ -0.35
FAM239A-202ENST00000438107 CYSTM1Q9H1C7 97 aa12.87□□□□□ -0.35
FAM239A-202ENST00000438107 FLNBO75369 2602 aaKnown RBP12.87□□□□□ -0.35
FAM239A-202ENST00000438107 J3KT08 172 aa12.87□□□□□ -0.35
FAM239A-202ENST00000438107 ELOF1P60002 83 aaKnown RBP12.87□□□□□ -0.35
FAM239A-202ENST00000438107 EGFEM1PQ0D2K5 195 aa12.87□□□□□ -0.35
FAM239A-202ENST00000438107 CAMK2N2Q96S95 79 aa12.87□□□□□ -0.35
FAM239A-202ENST00000438107 RPS28P62857 69 aaKnown RBP12.86□□□□□ -0.35
FAM239A-202ENST00000438107 KRTAP26-1Q6PEX3 210 aa12.86□□□□□ -0.35
FAM239A-202ENST00000438107 BCE1O60756 84 aa12.86□□□□□ -0.35
FAM239A-202ENST00000438107 VPREB1P12018 145 aa12.86□□□□□ -0.35
FAM239A-202ENST00000438107 TRRAPQ9Y4A5 3859 aa12.86□□□□□ -0.35
FAM239A-202ENST00000438107 KPRPQ5T749 579 aaPredicted RBP12.84□□□□□ -0.35
FAM239A-202ENST00000438107 WFDC10BQ8IUB3 73 aa12.84□□□□□ -0.35
FAM239A-202ENST00000438107 M0R2N4 97 aa12.83□□□□□ -0.36
FAM239A-202ENST00000438107 M0R378 163 aa12.83□□□□□ -0.36
FAM239A-202ENST00000438107 Q6ZVQ6 151 aa12.83□□□□□ -0.36
FAM239A-202ENST00000438107 F8P00451 2351 aa12.83□□□□□ -0.36
FAM239A-202ENST00000438107 LINC01547P58512 204 aaPredicted RBP12.83□□□□□ -0.36
FAM239A-202ENST00000438107 TRBV7-4A0A0J9YYF1 115 aa12.82□□□□□ -0.36
FAM239A-202ENST00000438107 HIGD2BQ4VC39 106 aa12.82□□□□□ -0.36
FAM239A-202ENST00000438107 CXCL6P80162 114 aa12.81□□□□□ -0.36
FAM239A-202ENST00000438107 F8WDY8 70 aa12.8□□□□□ -0.36
FAM239A-202ENST00000438107 NDUFC2-KCTD14E9PQ53 114 aa12.8□□□□□ -0.36
FAM239A-202ENST00000438107 Q6ZRU5 148 aa12.8□□□□□ -0.36
FAM239A-202ENST00000438107 C15orf56Q8N910 161 aa12.8□□□□□ -0.36
FAM239A-202ENST00000438107 HAMPP81172 84 aa12.77□□□□□ -0.36
FAM239A-202ENST00000438107 LOC107984640A0A0U1RRK4 108 aa12.77□□□□□ -0.37
FAM239A-202ENST00000438107 LINC00528Q8N1L1 170 aa12.76□□□□□ -0.37
FAM239A-202ENST00000438107 DPH3Q96FX2 82 aa12.76□□□□□ -0.37
FAM239A-202ENST00000438107 TRAV7A0A075B6U4 112 aa12.74□□□□□ -0.37
FAM239A-202ENST00000438107 Q6ZTC4 211 aa12.74□□□□□ -0.37
FAM239A-202ENST00000438107 C1orf43Q9BWL3 253 aa12.74□□□□□ -0.37
FAM239A-202ENST00000438107 ESRGQ1W209 222 aa12.73□□□□□ -0.37
FAM239A-202ENST00000438107 RETNQ9HD89 108 aa12.73□□□□□ -0.37
FAM239A-202ENST00000438107 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
FAM239A-202ENST00000438107 Q6ZRP5 223 aa12.7□□□□□ -0.38
FAM239A-202ENST00000438107 OXLD1Q5BKU9 147 aa12.69□□□□□ -0.38
FAM239A-202ENST00000438107 FAM19A5Q7Z5A7 132 aaPredicted RBP12.69□□□□□ -0.38
FAM239A-202ENST00000438107 C20orf197Q8N268 126 aa12.69□□□□□ -0.38
FAM239A-202ENST00000438107 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
FAM239A-202ENST00000438107 SYCNQ0VAF6 134 aa12.68□□□□□ -0.38
FAM239A-202ENST00000438107 IGKV2D-24A0A075B6R9 120 aa12.67□□□□□ -0.38
FAM239A-202ENST00000438107 TRAV10A0A0B4J240 114 aa12.66□□□□□ -0.38
FAM239A-202ENST00000438107 KCNQ1DNQ9H478 68 aa12.66□□□□□ -0.38
FAM239A-202ENST00000438107 FBN1P35555 2871 aaKnown RBP12.65□□□□□ -0.38
FAM239A-202ENST00000438107 DEFB131BA0A096LNP1 70 aa12.63□□□□□ -0.39
FAM239A-202ENST00000438107 KLKP1Q107X0 134 aa12.63□□□□□ -0.39
FAM239A-202ENST00000438107 KRTAP24-1Q3LI83 254 aa12.63□□□□□ -0.39
FAM239A-202ENST00000438107 NKAPP1Q8N9T2 125 aa12.63□□□□□ -0.39
FAM239A-202ENST00000438107 STAB1Q9NY15 2570 aa12.62□□□□□ -0.39
FAM239A-202ENST00000438107 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms