RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 H3BUA1 57 aa6.03□□□□□ -1.44
CDC42BPA-206ENST00000429440 BRD3OSQ6XYD6 125 aa6.03□□□□□ -1.44
CDC42BPA-206ENST00000429440 ZFYVE26Q68DK2 2539 aa6.03□□□□□ -1.44
CDC42BPA-206ENST00000429440 VPREB1P12018 145 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 Q8N9L7 120 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 CSPG4Q6UVK1 2322 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 CENPEQ02224 2701 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 IGLV4-60A0A075B6I1 120 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 LOC101927531A0A1B0GV80 90 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 PRB1P04280 392 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 PLA2G2AP14555 144 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 CHD6Q8TD26 2715 aa6.02□□□□□ -1.45
CDC42BPA-206ENST00000429440 Q6ZQY7 126 aa6.01□□□□□ -1.45
CDC42BPA-206ENST00000429440 LINC00612Q8N6U2 182 aa6.01□□□□□ -1.45
CDC42BPA-206ENST00000429440 PRR26Q8N8Z3 221 aa6.01□□□□□ -1.45
CDC42BPA-206ENST00000429440 USP24Q9UPU5 2620 aa6.01□□□□□ -1.45
CDC42BPA-206ENST00000429440 USP9YO00507 2555 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-206ENST00000429440 MXRA5Q9NR99 2828 aa6.01□□□□□ -1.45
CDC42BPA-206ENST00000429440 LOC100131303A0A0U1RQF7 123 aa6.01□□□□□ -1.45
CDC42BPA-206ENST00000429440 IGHV4-30-2A0A087WSY4 118 aa6□□□□□ -1.45
CDC42BPA-206ENST00000429440 PRR3P79522 188 aaKnown RBP6□□□□□ -1.45
CDC42BPA-206ENST00000429440 COX17Q14061 63 aa6□□□□□ -1.45
CDC42BPA-206ENST00000429440 PRR15LQ9BU68 103 aa6□□□□□ -1.45
CDC42BPA-206ENST00000429440 POLQO75417 2590 aa6□□□□□ -1.45
CDC42BPA-206ENST00000429440 TRGV2A0A075B6R0 118 aa6□□□□□ -1.45
CDC42BPA-206ENST00000429440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-206ENST00000429440 FAM30AQ9NZY2 134 aa6□□□□□ -1.45
CDC42BPA-206ENST00000429440 ETDCA0A1B0GVM5 59 aa5.99□□□□□ -1.45
CDC42BPA-206ENST00000429440 A6NED7 52 aa5.99□□□□□ -1.45
CDC42BPA-206ENST00000429440 SMIM29Q86T20 159 aa5.99□□□□□ -1.45
CDC42BPA-206ENST00000429440 HTN1P15515 57 aa5.99□□□□□ -1.45
CDC42BPA-206ENST00000429440 B9D2Q9BPU9 175 aa5.99□□□□□ -1.45
CDC42BPA-206ENST00000429440 Q9BRP9 147 aa5.99□□□□□ -1.45
CDC42BPA-206ENST00000429440 ANKRD17O75179 2603 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 LRRK2Q5S007 2527 aa5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 ZNF469Q96JG9 3925 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 A6NDX4 124 aa5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 Q8IZM0 81 aa5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 CCL19Q99731 98 aa5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 UBR5O95071 2799 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 A8MTW9 85 aa5.98□□□□□ -1.45
CDC42BPA-206ENST00000429440 ZNF462Q96JM2 2506 aa5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 H3BUX3 64 aa5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 LY6EQ16553 131 aa5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 KHDC1LQ5JSQ8 128 aa5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 SPANXA2-OT1Q8N9U9 137 aa5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 SETXQ7Z333 2677 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 IGHV3-11P01762 117 aa5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 CELA1Q9UNI1 258 aa5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 FASNP49327 2511 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-206ENST00000429440 MOBPQ13875 183 aa5.96□□□□□ -1.45
CDC42BPA-206ENST00000429440 C9orf116Q5BN46 136 aaPredicted RBP5.96□□□□□ -1.45
CDC42BPA-206ENST00000429440 LINC00208Q96KT6 92 aa5.96□□□□□ -1.45
CDC42BPA-206ENST00000429440 A0A1B0GW54 56 aa5.96□□□□□ -1.46
CDC42BPA-206ENST00000429440 CCL24O00175 119 aa5.96□□□□□ -1.46
CDC42BPA-206ENST00000429440 IGLV1-40P01703 118 aa5.96□□□□□ -1.46
CDC42BPA-206ENST00000429440 MSMBP08118 114 aa5.96□□□□□ -1.46
CDC42BPA-206ENST00000429440 FAM208BQ5VWN6 2430 aa5.96□□□□□ -1.46
CDC42BPA-206ENST00000429440 PTPN13Q12923 2485 aa5.96□□□□□ -1.46
CDC42BPA-206ENST00000429440 IGHV4-30-4P0DP06 118 aa5.95□□□□□ -1.46
CDC42BPA-206ENST00000429440 HIGD2BQ4VC39 106 aa5.95□□□□□ -1.46
CDC42BPA-206ENST00000429440 UNC79Q9P2D8 2635 aa5.95□□□□□ -1.46
CDC42BPA-206ENST00000429440 NBPF19A0A087WUL8 3843 aa5.95□□□□□ -1.46
CDC42BPA-206ENST00000429440 PRR4Q16378 134 aa5.95□□□□□ -1.46
CDC42BPA-206ENST00000429440 LINC01554Q52M75 96 aa5.95□□□□□ -1.46
CDC42BPA-206ENST00000429440 AKAP9Q99996 3911 aa5.94□□□□□ -1.46
CDC42BPA-206ENST00000429440 IGLV6-57P01721 117 aa5.94□□□□□ -1.46
CDC42BPA-206ENST00000429440 C10orf25Q5T742 122 aa5.94□□□□□ -1.46
CDC42BPA-206ENST00000429440 ABCA12Q86UK0 2595 aa5.94□□□□□ -1.46
CDC42BPA-206ENST00000429440 TEX15Q9BXT5 2789 aa5.94□□□□□ -1.46
CDC42BPA-206ENST00000429440 IGHV4-28A0A0C4DH34 117 aa5.93□□□□□ -1.46
CDC42BPA-206ENST00000429440 IGHV4-59P01825 116 aa5.93□□□□□ -1.46
CDC42BPA-206ENST00000429440 PRM2P04554 102 aa5.92□□□□□ -1.46
CDC42BPA-206ENST00000429440 C10orf99Q6UWK7 81 aa5.92□□□□□ -1.46
CDC42BPA-206ENST00000429440 CR1P17927 2039 aa5.92□□□□□ -1.46
CDC42BPA-206ENST00000429440 B4DSR2 109 aa5.92□□□□□ -1.46
CDC42BPA-206ENST00000429440 IGKV3OR2-268A0A0C4DH90 116 aa5.91□□□□□ -1.46
CDC42BPA-206ENST00000429440 LINC00959A0A1B0GUT2 108 aa5.91□□□□□ -1.46
CDC42BPA-206ENST00000429440 KCNQ1DNQ9H478 68 aa5.91□□□□□ -1.46
CDC42BPA-206ENST00000429440 APCP25054 2843 aa5.91□□□□□ -1.46
CDC42BPA-206ENST00000429440 CYSRT1A8MQ03 144 aa5.9□□□□□ -1.46
CDC42BPA-206ENST00000429440 KIAA0087Q14695 138 aa5.9□□□□□ -1.46
CDC42BPA-206ENST00000429440 DEFB112Q30KQ8 113 aa5.9□□□□□ -1.46
CDC42BPA-206ENST00000429440 ST20-AS1Q8NBB2 130 aa5.9□□□□□ -1.46
CDC42BPA-206ENST00000429440 Q8NDZ9 215 aa5.9□□□□□ -1.46
CDC42BPA-206ENST00000429440 KLK12Q9UKR0 248 aa5.9□□□□□ -1.46
CDC42BPA-206ENST00000429440 C3orf84H3BNL1 204 aa5.9□□□□□ -1.47
CDC42BPA-206ENST00000429440 CREBBPQ92793 2442 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 CUBNO60494 3623 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 TRGV4A0A0C4DH28 118 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 MP68P56378 58 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 LINC00313P59037 77 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 MAPK1IP1LQ8NDC0 245 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 NAV2Q8IVL1 2488 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 MDFIQ99750 246 aa5.89□□□□□ -1.47
CDC42BPA-206ENST00000429440 FSHBP01225 129 aa5.88□□□□□ -1.47
CDC42BPA-206ENST00000429440 MYO9AB2RTY4 2548 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms