RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 RPS27LQ71UM5 84 aaKnown RBP3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 ANAPC11Q9NYG5 84 aa3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 KCNQ1DNQ9H478 68 aa3.03□□□□□ -1.92
TTC39DP-201ENST00000416781 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
TTC39DP-201ENST00000416781 Q96NJ1 140 aa3.02□□□□□ -1.93
TTC39DP-201ENST00000416781 A0A1W2PNN7 141 aa3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 RPL38P63173 70 aaKnown RBP3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 HAMPP81172 84 aa3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 TFF3Q07654 80 aa3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 CCL26Q9Y258 94 aa3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 ETDCA0A1B0GVM5 59 aa3□□□□□ -1.93
TTC39DP-201ENST00000416781 NCR3O14931 201 aa3□□□□□ -1.93
TTC39DP-201ENST00000416781 COX17Q14061 63 aa3□□□□□ -1.93
TTC39DP-201ENST00000416781 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
TTC39DP-201ENST00000416781 TRGV2A0A075B6R0 118 aa2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 IGKV4-1P06312 121 aa2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 RPL37AP61513 92 aaKnown RBP2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 TPRXLQ17RH7 258 aa2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 C5orf56Q8N8D9 126 aa2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 IGKV2-29A2NJV5 120 aaPredicted RBP2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 SPACA4Q8TDM5 124 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 RTTNQ86VV8 2226 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 CADP27708 2225 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 TRGV1A0A0A0MS02 117 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 PDE4DIPQ5VU43 2346 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 ATRXP46100 2492 aa2.97□□□□□ -1.93
TTC39DP-201ENST00000416781 ABCA1O95477 2261 aa2.97□□□□□ -1.93
TTC39DP-201ENST00000416781 COX7BP24311 80 aa2.97□□□□□ -1.93
TTC39DP-201ENST00000416781 LINC00304Q8N9R0 145 aa2.97□□□□□ -1.93
TTC39DP-201ENST00000416781 A0A0G2JQZ4 141 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 IAPPP10997 89 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 LY6EQ16553 131 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 ARHGAP5-AS1Q96IT6 56 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 CNFNQ9BYD5 112 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 COL4A2P08572 1712 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 CPSF4LA6NMK7 179 aaKnown RBP2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 A0A1B0GU69 56 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 HRES1P13985 223 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 SSC5DA1L4H1 1573 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 SORL1Q92673 2214 aa2.94□□□□□ -1.94
TTC39DP-201ENST00000416781 IGLV6-57P01721 117 aa2.93□□□□□ -1.94
TTC39DP-201ENST00000416781 TECTAO75443 2155 aa2.93□□□□□ -1.94
TTC39DP-201ENST00000416781 SHANK1Q9Y566 2161 aa2.93□□□□□ -1.94
TTC39DP-201ENST00000416781 URB1O60287 2271 aaKnown RBP2.92□□□□□ -1.94
TTC39DP-201ENST00000416781 C10orf55Q5SWW7 151 aa2.92□□□□□ -1.94
TTC39DP-201ENST00000416781 LINC01590Q5TEZ4 76 aa2.92□□□□□ -1.94
TTC39DP-201ENST00000416781 KNTC1P50748 2209 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 ALMS1Q8TCU4 4167 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 LINC00315P59091 139 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 FXYD4P59646 89 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 LINC00308Q8TCZ7 52 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 SMIM2Q9BVW6 85 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 TTTY10Q9BZA0 68 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 CEP350Q5VT06 3117 aa2.9□□□□□ -1.95
TTC39DP-201ENST00000416781 PRB2P02812 416 aaPredicted RBP2.9□□□□□ -1.95
TTC39DP-201ENST00000416781 PCNTO95613 3336 aa2.9□□□□□ -1.95
TTC39DP-201ENST00000416781 FN1P02751 2386 aaKnown RBP2.89□□□□□ -1.95
TTC39DP-201ENST00000416781 AHCTF1Q8WYP5 2266 aa2.89□□□□□ -1.95
TTC39DP-201ENST00000416781 ACYP2P14621 99 aa2.88□□□□□ -1.95
TTC39DP-201ENST00000416781 CRIP1P50238 77 aa2.88□□□□□ -1.95
TTC39DP-201ENST00000416781 PTPRQQ9UMZ3 2332 aa2.88□□□□□ -1.95
TTC39DP-201ENST00000416781 CNOT1A5YKK6 2376 aaKnown RBP2.87□□□□□ -1.95
TTC39DP-201ENST00000416781 DEFB131BA0A096LNP1 70 aa2.87□□□□□ -1.95
TTC39DP-201ENST00000416781 COL4A4P53420 1690 aaPredicted RBP2.87□□□□□ -1.95
TTC39DP-201ENST00000416781 NDUFA1O15239 70 aa2.86□□□□□ -1.95
TTC39DP-201ENST00000416781 PRB1P04280 392 aa2.86□□□□□ -1.95
TTC39DP-201ENST00000416781 INE1O15225 51 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 LINC00158P58513 81 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 DEFB134Q4QY38 66 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 H3BRN7 92 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 CCL19Q99731 98 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 ASXL3Q9C0F0 2248 aa2.84□□□□□ -1.95
TTC39DP-201ENST00000416781 Q6ZQY7 126 aa2.84□□□□□ -1.95
TTC39DP-201ENST00000416781 Q8N9L7 120 aa2.84□□□□□ -1.95
TTC39DP-201ENST00000416781 SMIM11BQ8TCY0 68 aa2.84□□□□□ -1.95
TTC39DP-201ENST00000416781 MRPL33O75394 65 aaKnown RBP2.83□□□□□ -1.96
TTC39DP-201ENST00000416781 M0R2N4 97 aa2.82□□□□□ -1.96
TTC39DP-201ENST00000416781 G3V318 75 aa2.82□□□□□ -1.96
TTC39DP-201ENST00000416781 LY6G6CO95867 125 aa2.82□□□□□ -1.96
TTC39DP-201ENST00000416781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.81□□□□□ -1.96
TTC39DP-201ENST00000416781 BRCA2P51587 3418 aa2.81□□□□□ -1.96
TTC39DP-201ENST00000416781 LOC730098B7Z3J9 87 aa2.81□□□□□ -1.96
TTC39DP-201ENST00000416781 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
TTC39DP-201ENST00000416781 GPR179Q6PRD1 2367 aa2.8□□□□□ -1.96
TTC39DP-201ENST00000416781 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 Q8IZM0 81 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 CDKN2A-AS1Q9UH64 79 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 NOTCH2Q04721 2471 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 DOPEY2Q9Y3R5 2298 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 CENPFP49454 3210 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 IGKV2D-24A0A075B6R9 120 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 KNL1Q8NG31 2342 aa2.78□□□□□ -1.96
TTC39DP-201ENST00000416781 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.78□□□□□ -1.96
TTC39DP-201ENST00000416781 HTTP42858 3142 aa2.78□□□□□ -1.96
TTC39DP-201ENST00000416781 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
TTC39DP-201ENST00000416781 H3BSH0 61 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms