RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 RANBP2P49792 3224 aaKnown RBP1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 MYMXA0A1B0GTQ4 84 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 SMIM31A0A1B0GVY4 71 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 CFDP00746 253 aaPredicted RBP1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 Q5BKY6 102 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 FDCSPQ8NFU4 85 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 TMEM263Q8WUH6 116 aaKnown RBP1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 IGSF10Q6WRI0 2623 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 CEP170BQ9Y4F5 1589 aaPredicted RBP1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 MROH1Q8NDA8 1641 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 GOLGA4Q13439 2230 aaKnown RBP1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 ZFYVE26Q68DK2 2539 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 PKD1L1Q8TDX9 2849 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 RGPD1P0DJD0 1748 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 GVINP1Q7Z2Y8 2422 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 LEPROTL1O95214 131 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 PLGLAQ15195 96 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 DEFB121Q5J5C9 76 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 UBE2D4Q9Y2X8 147 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 KIAA1109Q2LD37 5005 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 UNC80Q8N2C7 3258 aa1.06□□□□□ -2.24
HMGB3P31-201ENST00000413333 USP9YO00507 2555 aaPredicted RBP1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 ATP7BP35670 1465 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 PIK3C2BO00750 1634 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 A0A0D9SG42 100 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 D6R8Y8 96 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 PDCD5O14737 125 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 GCHFRP30047 84 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 DEFA5Q01523 94 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 C10orf113Q5VZT2 155 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 SPATA8Q6RVD6 105 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 MUSTN1Q8IVN3 82 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 PROK2Q9HC23 129 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 REV3LO60673 3130 aa1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 UBR5O95071 2799 aaPredicted RBP1.05□□□□□ -2.24
HMGB3P31-201ENST00000413333 FLNAP21333 2647 aaKnown RBP1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 INO80Q9ULG1 1556 aaPredicted RBP1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 NBEAL1Q6ZS30 2694 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 LRP6O75581 1613 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 LAMC1P11047 1609 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 ZNF831Q5JPB2 1677 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 PCLOQ9Y6V0 5065 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 CHD9Q3L8U1 2897 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 H0Y9P7 68 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 SPINK7P58062 85 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 DEFB107AQ8IZN7 70 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 UTRNP46939 3433 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 ZFHX4Q86UP3 3567 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 SAMD9Q5K651 1589 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 HIVEP3Q5T1R4 2406 aa1.04□□□□□ -2.24
HMGB3P31-201ENST00000413333 UTP20O75691 2785 aaKnown RBP1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 URB1O60287 2271 aaKnown RBP1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 CREBBPQ92793 2442 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 ACACBO00763 2458 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 CEP290O15078 2479 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 CEBPZOSA8MTT3 80 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 PIN1P1O15428 100 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 Q6JHZ5 121 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 NKTRP30414 1462 aaKnown RBP1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 MAGI3Q5TCQ9 1506 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 MADDQ8WXG6 1647 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 A0A0G2JMZ2 1700 aa1.03□□□□□ -2.24
HMGB3P31-201ENST00000413333 PCNX1Q96RV3 2341 aa1.03□□□□□ -2.25
HMGB3P31-201ENST00000413333 CNOT1A5YKK6 2376 aaKnown RBP1.03□□□□□ -2.25
HMGB3P31-201ENST00000413333 RYR1P21817 5038 aa1.03□□□□□ -2.25
HMGB3P31-201ENST00000413333 TRBV7-4A0A0J9YYF1 115 aa1.02□□□□□ -2.25
HMGB3P31-201ENST00000413333 HEPN1Q6WQI6 88 aa1.02□□□□□ -2.25
HMGB3P31-201ENST00000413333 DUOX2Q9NRD8 1548 aa1.02□□□□□ -2.25
HMGB3P31-201ENST00000413333 PLCE1Q9P212 2302 aa1.02□□□□□ -2.25
HMGB3P31-201ENST00000413333 TEX15Q9BXT5 2789 aa1.02□□□□□ -2.25
HMGB3P31-201ENST00000413333 TLN1Q9Y490 2541 aaKnown RBP1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 CACNA1HO95180 2353 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 BCORQ6W2J9 1755 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 POLR1AO95602 1720 aaPredicted RBP1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 PARP4Q9UKK3 1724 aaKnown RBP1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 PLCH1Q4KWH8 1693 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 KIAA0556O60303 1618 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 CD163L1Q9NR16 1453 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 ITPR1Q14643 2758 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 TRBV6-1A0A0K0K1D8 114 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 DOPEY2Q9Y3R5 2298 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 TENM4Q6N022 2769 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 COL14A1Q05707 1796 aaKnown RBP1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 QSER1Q2KHR3 1735 aa1.01□□□□□ -2.25
HMGB3P31-201ENST00000413333 MTORP42345 2549 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 URB2Q14146 1524 aaKnown RBP1□□□□□ -2.25
HMGB3P31-201ENST00000413333 TULP4Q9NRJ4 1543 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 PDZD2O15018 2839 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 MEGF8Q7Z7M0 2845 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 SMIM13P0DJ93 91 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 HAMPP81172 84 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 C6orf201Q7Z4U5 140 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 FBN2P35556 2912 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 MUC2Q02817 5179 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 TIAM2Q8IVF5 1701 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 WIZO95785 1651 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 CFAP43Q8NDM7 1665 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 USP32Q8NFA0 1604 aa1□□□□□ -2.25
HMGB3P31-201ENST00000413333 CICQ96RK0 1608 aaPredicted RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 306.2 ms