RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 DAND5Q8N907 189 aa3.65□□□□□ -1.83
LINC00342-201ENST00000412393 C20orf203Q8NBC4 194 aa3.65□□□□□ -1.83
LINC00342-201ENST00000412393 RPL39LQ96EH5 51 aaKnown RBP3.65□□□□□ -1.83
LINC00342-201ENST00000412393 C9orf85Q96MD7 179 aa3.65□□□□□ -1.83
LINC00342-201ENST00000412393 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
LINC00342-201ENST00000412393 TEX49A0A1B0GTD5 131 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 NDUFC2-KCTD14E9PQ53 114 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 RS1O15537 224 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 TRACP01848 142 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 COX7CP15954 63 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 HIST1H4AP62805 103 aaKnown RBP3.64□□□□□ -1.83
LINC00342-201ENST00000412393 MIAQ16674 131 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 ANXA2RQ3ZCQ2 193 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 PRR9Q5T870 116 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 GAGE2AQ6NT46 116 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 C2orf82Q6UX34 121 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 Q6ZQT7 251 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 Q6ZR54 194 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 LINC00612Q8N6U2 182 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 COPS9Q8WXC6 57 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 DNAH2Q9P225 4427 aa3.64□□□□□ -1.83
LINC00342-201ENST00000412393 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
LINC00342-201ENST00000412393 IGLV5-45A0A087WSX0 123 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 IGHV1-58A0A0C4DH39 117 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 FAM236AA0A1B0GUQ0 79 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 FAM236BA0A1B0GV22 79 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 TINCRA0A1B0GVN0 87 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 I3L3M4 83 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 RTL8CO15255 209 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 S100A4P26447 101 aaKnown RBP3.63□□□□□ -1.83
LINC00342-201ENST00000412393 CCL18P55774 89 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 TIRAPP58753 221 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 ZNF415Q09FC8 603 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 DAZ2Q13117 558 aaKnown RBP3.63□□□□□ -1.83
LINC00342-201ENST00000412393 DGAT2L7PQ6IED9 249 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 Q6ZTI0 123 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 FAM104AQ969W3 186 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 VSIG2Q96IQ7 327 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 LINC00467Q9BRT7 94 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 TIMM21Q9BVV7 248 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 ICOSQ9Y6W8 199 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 FAT2Q9NYQ8 4349 aa3.63□□□□□ -1.83
LINC00342-201ENST00000412393 IGLV4-3A0A075B6K6 122 aa3.62□□□□□ -1.83
LINC00342-201ENST00000412393 IGHV1OR15-1A0A075B7D0 117 aa3.62□□□□□ -1.83
LINC00342-201ENST00000412393 GNRH2O43555 120 aa3.62□□□□□ -1.83
LINC00342-201ENST00000412393 IGHV3-30-3P0DP02 117 aa3.62□□□□□ -1.83
LINC00342-201ENST00000412393 C1orf134Q5TEV5 83 aa3.62□□□□□ -1.83
LINC00342-201ENST00000412393 LINC00588Q9Y4M8 146 aa3.62□□□□□ -1.83
LINC00342-201ENST00000412393 HECTD4Q9Y4D8 3996 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 DNAH11Q96DT5 4516 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 TRGV2A0A075B6R0 118 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 TRGV1A0A0A0MS02 117 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 IGHV3-16A0A0C4DH30 117 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 NBDYA0A0U1RRE5 68 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 H3BNG1 76 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 COX7A2LO14548 114 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 RPL39P62891 51 aaKnown RBP3.61□□□□□ -1.83
LINC00342-201ENST00000412393 C11orf72Q8NBR9 251 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 C2orf48Q96LS8 159 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 V9GYY9 64 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 HERC2O95714 4834 aa3.61□□□□□ -1.83
LINC00342-201ENST00000412393 A0A0J9YXV3 536 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 NDUFA1O15239 70 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 BCE1O60756 84 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 IGHV3-53P01767 116 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 INAFM2P0DMQ5 153 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 SEC61GP60059 68 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 ZNF56Q15929 161 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 ESRGQ1W209 222 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 ADAMTSL4-AS1Q5T5F5 129 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 SFTA2Q6UW10 78 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 C6orf223Q8N319 242 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 OBSCN-AS1Q96MR7 158 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 Q9H8V8 135 aa3.6□□□□□ -1.83
LINC00342-201ENST00000412393 PKD1P98161 4303 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 A0A096LPF7 62 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 LOC107984640A0A0U1RRK4 108 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 NDUFC2O95298 119 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 MGPP08493 103 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 CIRBPQ14011 172 aaKnown RBP3.59□□□□□ -1.83
LINC00342-201ENST00000412393 CHCHD5Q9BSY4 110 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 UPK3BQ9BT76 320 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 NDUFA12Q9UI09 145 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 PRO0255Q9UI72 69 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 C22orf24Q9Y442 160 aa3.59□□□□□ -1.83
LINC00342-201ENST00000412393 PKHD1P08F94 4074 aa3.59□□□□□ -1.84
LINC00342-201ENST00000412393 A0A087WYN8 130 aa3.58□□□□□ -1.84
LINC00342-201ENST00000412393 TRAV13-1A0A0B4J241 112 aa3.58□□□□□ -1.84
LINC00342-201ENST00000412393 TRGV4A0A0C4DH28 118 aa3.58□□□□□ -1.84
LINC00342-201ENST00000412393 PRSS2P07478 247 aa3.58□□□□□ -1.84
LINC00342-201ENST00000412393 RPL28P46779 137 aaKnown RBP3.58□□□□□ -1.84
LINC00342-201ENST00000412393 JPT2Q9H910 190 aa3.58□□□□□ -1.84
LINC00342-201ENST00000412393 KIAA1109Q2LD37 5005 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 H0YGX0 51 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
LINC00342-201ENST00000412393 NPC2P61916 151 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 Q1RN00 199 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 C6orf226Q5I0X4 101 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 235.3 ms