RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 IGLC3P0DOY3 106 aa-0.21□□□□□ -2.44
CLHC1-205ENST00000411884 SMIM11AP58511 58 aa-0.21□□□□□ -2.44
CLHC1-205ENST00000411884 H1FX-AS1Q4G0G2 97 aa-0.21□□□□□ -2.44
CLHC1-205ENST00000411884 MRPL34Q9BQ48 92 aaKnown RBP-0.21□□□□□ -2.44
CLHC1-205ENST00000411884 SLIT1O75093 1534 aa-0.22□□□□□ -2.44
CLHC1-205ENST00000411884 KRTAP6-1Q3LI64 71 aa-0.22□□□□□ -2.44
CLHC1-205ENST00000411884 SNHG12Q9BXW3 62 aa-0.22□□□□□ -2.44
CLHC1-205ENST00000411884 IQSEC2Q5JU85 1478 aa-0.22□□□□□ -2.45
CLHC1-205ENST00000411884 ABCC10Q5T3U5 1492 aa-0.22□□□□□ -2.45
CLHC1-205ENST00000411884 SAMD9Q5K651 1589 aa-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 BSNQ9UPA5 3926 aa-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 ABCA3Q99758 1704 aa-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 HEPN1Q6WQI6 88 aa-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 HIGD1BQ9P298 99 aa-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 PDCD11Q14690 1871 aaKnown RBP-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 ACANP16112 2415 aa-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 CLIP1P30622 1438 aa-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 EPRSP07814 1512 aaKnown RBP-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 HECTD4Q9Y4D8 3996 aa-0.23□□□□□ -2.45
CLHC1-205ENST00000411884 KNDC1Q76NI1 1749 aa-0.24□□□□□ -2.45
CLHC1-205ENST00000411884 DEFB112Q30KQ8 113 aa-0.24□□□□□ -2.45
CLHC1-205ENST00000411884 CDKN2A-AS1Q9UH64 79 aa-0.24□□□□□ -2.45
CLHC1-205ENST00000411884 UBE2D4Q9Y2X8 147 aa-0.24□□□□□ -2.45
CLHC1-205ENST00000411884 DCHS2Q6V1P9 2916 aa-0.25□□□□□ -2.45
CLHC1-205ENST00000411884 HMGN2P05204 90 aaKnown RBP-0.25□□□□□ -2.45
CLHC1-205ENST00000411884 PEA15Q15121 130 aa-0.25□□□□□ -2.45
CLHC1-205ENST00000411884 DEFB135Q30KP9 77 aa-0.25□□□□□ -2.45
CLHC1-205ENST00000411884 CUX1P39880 1505 aa-0.25□□□□□ -2.45
CLHC1-205ENST00000411884 LRRC37AA6NMS7 1700 aa-0.25□□□□□ -2.45
CLHC1-205ENST00000411884 FMN2Q9NZ56 1722 aa-0.26□□□□□ -2.45
CLHC1-205ENST00000411884 TARBP1Q13395 1621 aaKnown RBP-0.26□□□□□ -2.45
CLHC1-205ENST00000411884 FANCAO15360 1455 aa-0.26□□□□□ -2.45
CLHC1-205ENST00000411884 ATP10BO94823 1461 aa-0.26□□□□□ -2.45
CLHC1-205ENST00000411884 C9orf62Q8N4C0 152 aa-0.26□□□□□ -2.45
CLHC1-205ENST00000411884 C20orf78Q9BR46 151 aa-0.26□□□□□ -2.45
CLHC1-205ENST00000411884 SETXQ7Z333 2677 aaKnown RBP-0.26□□□□□ -2.45
CLHC1-205ENST00000411884 LRP1BQ9NZR2 4599 aa-0.27□□□□□ -2.45
CLHC1-205ENST00000411884 CNOT1A5YKK6 2376 aaKnown RBP-0.27□□□□□ -2.45
CLHC1-205ENST00000411884 PLGLAQ15195 96 aa-0.27□□□□□ -2.45
CLHC1-205ENST00000411884 NMSQ5H8A3 153 aa-0.27□□□□□ -2.45
CLHC1-205ENST00000411884 Q9H521 79 aa-0.27□□□□□ -2.45
CLHC1-205ENST00000411884 COX7BP24311 80 aa-0.28□□□□□ -2.45
CLHC1-205ENST00000411884 PAPPA2Q9BXP8 1791 aa-0.28□□□□□ -2.45
CLHC1-205ENST00000411884 MARF1Q9Y4F3 1742 aaKnown RBP-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 ZANQ9Y493 2812 aa-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 COL6A3P12111 3177 aa-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 SHPRHQ149N8 1683 aa-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 A0A1B0GUT8 65 aa-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 CYB5AP00167 134 aa-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 RPL38P63173 70 aaKnown RBP-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 PYY3Q5JQD4 70 aa-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 FLNBO75369 2602 aaKnown RBP-0.29□□□□□ -2.46
CLHC1-205ENST00000411884 CCNB3Q8WWL7 1395 aa-0.3□□□□□ -2.46
CLHC1-205ENST00000411884 LELP1Q5T871 98 aa-0.3□□□□□ -2.46
CLHC1-205ENST00000411884 WFDC13Q8IUB5 93 aa-0.3□□□□□ -2.46
CLHC1-205ENST00000411884 V9GYS6 101 aa-0.3□□□□□ -2.46
CLHC1-205ENST00000411884 MAGI2Q86UL8 1455 aa-0.3□□□□□ -2.46
CLHC1-205ENST00000411884 PRKDCP78527 4128 aaKnown RBP-0.3□□□□□ -2.46
CLHC1-205ENST00000411884 PCNX1Q96RV3 2341 aa-0.31□□□□□ -2.46
CLHC1-205ENST00000411884 IQCF6A8MYZ5 107 aa-0.31□□□□□ -2.46
CLHC1-205ENST00000411884 GAFA1Q96PS6 74 aa-0.31□□□□□ -2.46
CLHC1-205ENST00000411884 TENM2Q9NT68 2774 aa-0.31□□□□□ -2.46
CLHC1-205ENST00000411884 TROQ12816 1431 aaPredicted RBP-0.31□□□□□ -2.46
CLHC1-205ENST00000411884 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.32□□□□□ -2.46
CLHC1-205ENST00000411884 C5P01031 1676 aa-0.32□□□□□ -2.46
CLHC1-205ENST00000411884 COX6B2Q6YFQ2 88 aa-0.32□□□□□ -2.46
CLHC1-205ENST00000411884 MYMXA0A1B0GTQ4 84 aa-0.33□□□□□ -2.46
CLHC1-205ENST00000411884 S100A16Q96FQ6 103 aaKnown RBP-0.33□□□□□ -2.46
CLHC1-205ENST00000411884 CEP162Q5TB80 1403 aa-0.33□□□□□ -2.46
CLHC1-205ENST00000411884 DSTQ03001 7570 aaKnown RBP-0.33□□□□□ -2.46
CLHC1-205ENST00000411884 PLIN4Q96Q06 1357 aa-0.33□□□□□ -2.46
CLHC1-205ENST00000411884 NEXMIFQ5QGS0 1516 aa-0.33□□□□□ -2.46
CLHC1-205ENST00000411884 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.33□□□□□ -2.463e-21■■■■■ 78.4
CLHC1-205ENST00000411884 CLTCQ00610 1675 aaKnown RBP-0.33□□□□□ -2.46
CLHC1-205ENST00000411884 SRRM2Q9UQ35 2752 aaKnown RBP-0.34□□□□□ -2.46
CLHC1-205ENST00000411884 SNRPFP62306 86 aaKnown RBP-0.34□□□□□ -2.46
CLHC1-205ENST00000411884 MON2Q7Z3U7 1717 aa-0.34□□□□□ -2.46
CLHC1-205ENST00000411884 KIAA1551Q9HCM1 1747 aa-0.34□□□□□ -2.46
CLHC1-205ENST00000411884 MUC2Q02817 5179 aa-0.34□□□□□ -2.46
CLHC1-205ENST00000411884 ATP7BP35670 1465 aa-0.35□□□□□ -2.46
CLHC1-205ENST00000411884 PVALEFA0A1B0GWK0 134 aa-0.35□□□□□ -2.47
CLHC1-205ENST00000411884 H0YGG7 62 aa-0.35□□□□□ -2.47
CLHC1-205ENST00000411884 K7EP34 96 aa-0.35□□□□□ -2.47
CLHC1-205ENST00000411884 SPRR2AP35326 72 aa-0.35□□□□□ -2.47
CLHC1-205ENST00000411884 KRTAP19-7Q3SYF9 63 aa-0.35□□□□□ -2.47
CLHC1-205ENST00000411884 LINC00643Q86TS7 51 aa-0.35□□□□□ -2.47
CLHC1-205ENST00000411884 TRAV21A0A0B4J279 112 aa-0.36□□□□□ -2.47
CLHC1-205ENST00000411884 RABAC1Q9UI14 185 aa-0.36□□□□□ -2.47
CLHC1-205ENST00000411884 LRRC9Q6ZRR7 1453 aa-0.36□□□□□ -2.47
CLHC1-205ENST00000411884 CEBPZOSA8MTT3 80 aa-0.37□□□□□ -2.47
CLHC1-205ENST00000411884 NDUFA3O95167 84 aa-0.37□□□□□ -2.47
CLHC1-205ENST00000411884 WFDC9Q8NEX5 89 aa-0.37□□□□□ -2.47
CLHC1-205ENST00000411884 LRRC7Q96NW7 1537 aa-0.38□□□□□ -2.47
CLHC1-205ENST00000411884 CRYBG1Q9Y4K1 1723 aa-0.38□□□□□ -2.47
CLHC1-205ENST00000411884 NDUFB1O75438 58 aa-0.38□□□□□ -2.47
CLHC1-205ENST00000411884 ACYP1P07311 99 aa-0.38□□□□□ -2.47
CLHC1-205ENST00000411884 STAB2Q8WWQ8 2551 aa-0.38□□□□□ -2.47
CLHC1-205ENST00000411884 KRTAP6-2Q3LI66 62 aa-0.39□□□□□ -2.47
CLHC1-205ENST00000411884 PKHD1P08F94 4074 aa-0.39□□□□□ -2.47
CLHC1-205ENST00000411884 KNL1Q8NG31 2342 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms