RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 LEPROTL1O95214 131 aa3.6□□□□□ -1.83
LINC00396-201ENST00000411690 PPP1R17O96001 155 aa3.6□□□□□ -1.83
LINC00396-201ENST00000411690 PPBPP02775 128 aa3.6□□□□□ -1.83
LINC00396-201ENST00000411690 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
LINC00396-201ENST00000411690 LINC01545Q5VT33 79 aa3.6□□□□□ -1.83
LINC00396-201ENST00000411690 RPL39LQ96EH5 51 aaKnown RBP3.6□□□□□ -1.83
LINC00396-201ENST00000411690 LINC00959A0A1B0GUT2 108 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 LINC01546A6NGU7 62 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 FAM104BQ5XKR9 115 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 SLC25A34Q6PIV7 304 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 FAM19A2Q8N3H0 131 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 URB1-AS1Q96HZ7 61 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 KIR2DL4Q99706 377 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 CNFNQ9BYD5 112 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 ANAPC11Q9NYG5 84 aa3.59□□□□□ -1.83
LINC00396-201ENST00000411690 M0QXV9 152 aa3.58□□□□□ -1.84
LINC00396-201ENST00000411690 COX7A2LO14548 114 aa3.58□□□□□ -1.84
LINC00396-201ENST00000411690 SEC11AP67812 179 aa3.58□□□□□ -1.84
LINC00396-201ENST00000411690 UBE2V1Q13404 147 aa3.58□□□□□ -1.84
LINC00396-201ENST00000411690 CD164L2Q6UWJ8 174 aa3.58□□□□□ -1.84
LINC00396-201ENST00000411690 FP248Q71RG6 208 aaPredicted RBP3.58□□□□□ -1.84
LINC00396-201ENST00000411690 FA2HQ7L5A8 372 aa3.58□□□□□ -1.84
LINC00396-201ENST00000411690 C2orf48Q96LS8 159 aa3.58□□□□□ -1.84
LINC00396-201ENST00000411690 TRAV13-1A0A0B4J241 112 aa3.57□□□□□ -1.84
LINC00396-201ENST00000411690 PRSS47A8MTI9 375 aa3.57□□□□□ -1.84
LINC00396-201ENST00000411690 VCYO14598 125 aa3.57□□□□□ -1.84
LINC00396-201ENST00000411690 COX8AP10176 69 aa3.57□□□□□ -1.84
LINC00396-201ENST00000411690 PCP4P48539 62 aa3.57□□□□□ -1.84
LINC00396-201ENST00000411690 ORMDL3Q8N138 153 aa3.57□□□□□ -1.84
LINC00396-201ENST00000411690 NXT2Q9NPJ8 142 aaKnown RBP3.57□□□□□ -1.84
LINC00396-201ENST00000411690 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
LINC00396-201ENST00000411690 TRBV6-5A0A0K0K1A5 114 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 LINC01549A6NIU2 74 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 HBDP02042 147 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 G0S2P27469 103 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 CKS2P33552 79 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 RPL28P46779 137 aaKnown RBP3.56□□□□□ -1.84
LINC00396-201ENST00000411690 GAGE2EQ4V326 116 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 KRTAP7-1Q8IUC3 87 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 AMN1Q8IY45 258 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 PRELID3AQ96N28 172 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 GAGE2DQ9UEU5 116 aa3.56□□□□□ -1.84
LINC00396-201ENST00000411690 IGKV2D-26A0A0A0MRZ7 120 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 A6NDN8 102 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 SMKR1H3BMG3 65 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 K7EMI3 77 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 NPSP0C0P6 89 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 HINT1P49773 126 aaPredicted RBP3.55□□□□□ -1.84
LINC00396-201ENST00000411690 SUMO2P61956 95 aaKnown RBP3.55□□□□□ -1.84
LINC00396-201ENST00000411690 SPAG11BQ08648 103 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 BATFQ16520 125 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 BVES-AS1Q5T3Y7 98 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 MAP1LC3AQ9H492 121 aa3.55□□□□□ -1.84
LINC00396-201ENST00000411690 MRPL35Q9NZE8 188 aaKnown RBP3.55□□□□□ -1.84
LINC00396-201ENST00000411690 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
LINC00396-201ENST00000411690 TRBV27A0A0K0K1C4 114 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 D6R8Y8 96 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 ATP5LO75964 103 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 HSD52Q0P140 79 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 MRPL51Q4U2R6 128 aaKnown RBP3.54□□□□□ -1.84
LINC00396-201ENST00000411690 RNASE13Q5GAN3 156 aaKnown RBP3.54□□□□□ -1.84
LINC00396-201ENST00000411690 LINC00242Q5T6M2 205 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 C5orf38Q86SI9 138 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 BOD1L2Q8IYS8 172 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 IFI27L1Q96BM0 104 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 CDC42SE2Q9NRR3 84 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 HIGD1BQ9P298 99 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
LINC00396-201ENST00000411690 A0A096LNJ9 63 aa3.53□□□□□ -1.84
LINC00396-201ENST00000411690 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
LINC00396-201ENST00000411690 H3BRM9 83 aa3.53□□□□□ -1.84
LINC00396-201ENST00000411690 TAX1BP3O14907 124 aa3.53□□□□□ -1.84
LINC00396-201ENST00000411690 NDUFA1O15239 70 aa3.53□□□□□ -1.84
LINC00396-201ENST00000411690 IFI27P40305 119 aaPredicted RBP3.53□□□□□ -1.84
LINC00396-201ENST00000411690 FAM229BQ4G0N7 80 aa3.53□□□□□ -1.84
LINC00396-201ENST00000411690 GTF2H5Q6ZYL4 71 aa3.53□□□□□ -1.84
LINC00396-201ENST00000411690 USH2AO75445 5202 aa3.53□□□□□ -1.84
LINC00396-201ENST00000411690 B5MCH6 92 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 PRSS2P07478 247 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
LINC00396-201ENST00000411690 RPL32P62910 135 aaKnown RBP3.52□□□□□ -1.85
LINC00396-201ENST00000411690 VAMP3Q15836 100 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 TAL2Q16559 108 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 SPAG11AQ6PDA7 123 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 Q6ZUT4 128 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 C2orf91Q6ZV80 131 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 Q8N8P6 123 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 DAND5Q8N907 189 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 C20orf78Q9BR46 151 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 SPANXA1Q9NS26 97 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 UBE2D4Q9Y2X8 147 aa3.52□□□□□ -1.85
LINC00396-201ENST00000411690 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
LINC00396-201ENST00000411690 TRAV12-1A0A0B4J245 112 aa3.51□□□□□ -1.85
LINC00396-201ENST00000411690 F8WDY8 70 aa3.51□□□□□ -1.85
LINC00396-201ENST00000411690 BCE1O60756 84 aa3.51□□□□□ -1.85
LINC00396-201ENST00000411690 TNFRSF6BO95407 300 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms