RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 CCL24O00175 119 aa3.99□□□□□ -1.77
R3HDM1-202ENST00000409478 IGLV6-57P01721 117 aa3.99□□□□□ -1.77
R3HDM1-202ENST00000409478 DEFB114Q30KQ6 69 aa3.99□□□□□ -1.77
R3HDM1-202ENST00000409478 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 CD164Q04900 197 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 CD164L2Q6UWJ8 174 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 LRBAP50851 2863 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 DAD1P61803 113 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 KIAA0087Q14695 138 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 HIGD2AQ9BW72 106 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 IGHV4-30-2A0A087WSY4 118 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 DEFB112Q30KQ8 113 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 ODF3L2Q3SX64 289 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 DIRC1Q969H9 104 aa3.98□□□□□ -1.77
R3HDM1-202ENST00000409478 DEFB136Q30KP8 78 aa3.97□□□□□ -1.77
R3HDM1-202ENST00000409478 ZFHX3Q15911 3703 aa3.97□□□□□ -1.77
R3HDM1-202ENST00000409478 C4orf3Q8WVX3 66 aa3.97□□□□□ -1.77
R3HDM1-202ENST00000409478 B4DSR2 109 aa3.97□□□□□ -1.77
R3HDM1-202ENST00000409478 Q6ZRP5 223 aa3.96□□□□□ -1.77
R3HDM1-202ENST00000409478 ZNF702PQ9H963 129 aa3.96□□□□□ -1.77
R3HDM1-202ENST00000409478 Q8NDZ9 215 aa3.96□□□□□ -1.78
R3HDM1-202ENST00000409478 C2CD3Q4AC94 2353 aa3.96□□□□□ -1.78
R3HDM1-202ENST00000409478 DSCR9P59020 149 aa3.96□□□□□ -1.78
R3HDM1-202ENST00000409478 LCE6AA0A183 80 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 SETXQ7Z333 2677 aaKnown RBP3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 LINC00269Q8N2A0 174 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 RELNP78509 3460 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 LYRM9A8MSI8 78 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 CMC4P56277 68 aaPredicted RBP3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 C9orf116Q5BN46 136 aaPredicted RBP3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 C18orf65Q6ZTR6 163 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 HRNRQ86YZ3 2850 aaPredicted RBP3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 SORL1Q92673 2214 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 ELOF1P60002 83 aaKnown RBP3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 Q8N9L7 120 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 C1orf64Q8NEQ6 169 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 LINC01006Q8NI28 216 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 ZNF73O43830 326 aaPredicted RBP3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 HIGD2BQ4VC39 106 aa3.95□□□□□ -1.78
R3HDM1-202ENST00000409478 CLPSL2Q6UWE3 100 aa3.94□□□□□ -1.78
R3HDM1-202ENST00000409478 CHCHD10Q8WYQ3 142 aaPredicted RBP3.94□□□□□ -1.78
R3HDM1-202ENST00000409478 BAHCC1Q9P281 2608 aa3.94□□□□□ -1.78
R3HDM1-202ENST00000409478 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
R3HDM1-202ENST00000409478 A0A0J9YWU9 116 aa3.94□□□□□ -1.78
R3HDM1-202ENST00000409478 IGHV4-30-4P0DP06 118 aa3.94□□□□□ -1.78
R3HDM1-202ENST00000409478 CELA1Q9UNI1 258 aa3.94□□□□□ -1.78
R3HDM1-202ENST00000409478 ATRQ13535 2644 aa3.94□□□□□ -1.78
R3HDM1-202ENST00000409478 A0A1B0GW54 56 aa3.93□□□□□ -1.78
R3HDM1-202ENST00000409478 CYP4F30PQ9H0H9 118 aa3.93□□□□□ -1.78
R3HDM1-202ENST00000409478 ITPR3Q14573 2671 aa3.93□□□□□ -1.78
R3HDM1-202ENST00000409478 GCN1Q92616 2671 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-202ENST00000409478 MAST4O15021 2626 aa3.93□□□□□ -1.78
R3HDM1-202ENST00000409478 KRTAP10-9P60411 292 aa3.93□□□□□ -1.78
R3HDM1-202ENST00000409478 ESM1Q9NQ30 184 aa3.93□□□□□ -1.78
R3HDM1-202ENST00000409478 FLNAP21333 2647 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-202ENST00000409478 PSPHP1O15172 72 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 GYPEP15421 78 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 UBE2BP63146 152 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 Q6YL49 198 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 MRPL55Q7Z7F7 128 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 FAM30AQ9NZY2 134 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 SPAG11BQ08648 103 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 SMIM29Q86T20 159 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 LRCOL1A6NCL2 159 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 NDUFB1O75438 58 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 GIG44P09565 113 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 GVQW2A0A096LPI5 108 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 REG3AQ06141 175 aa3.92□□□□□ -1.78
R3HDM1-202ENST00000409478 UNQ6190/PRO20217Q6UXQ8 127 aa3.91□□□□□ -1.78
R3HDM1-202ENST00000409478 LINC01356Q8N9X3 169 aa3.91□□□□□ -1.78
R3HDM1-202ENST00000409478 RETNQ9HD89 108 aa3.91□□□□□ -1.78
R3HDM1-202ENST00000409478 PSCAO43653 123 aa3.91□□□□□ -1.78
R3HDM1-202ENST00000409478 ETDCA0A1B0GVM5 59 aa3.91□□□□□ -1.78
R3HDM1-202ENST00000409478 ANGP03950 147 aaKnown RBP3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 DEFB113Q30KQ7 82 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 C10orf25Q5T742 122 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 LINC00612Q8N6U2 182 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 IGLV10-54A0A075B6I4 117 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 CYSRT1A8MQ03 144 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 C3orf84H3BNL1 204 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 UBE2AP49459 152 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 CSNK1G2-AS1Q8NCQ2 148 aa3.9□□□□□ -1.78
R3HDM1-202ENST00000409478 SYCNQ0VAF6 134 aa3.9□□□□□ -1.79
R3HDM1-202ENST00000409478 LINC00528Q8N1L1 170 aa3.9□□□□□ -1.79
R3HDM1-202ENST00000409478 PRO0255Q9UI72 69 aa3.9□□□□□ -1.79
R3HDM1-202ENST00000409478 KLK12Q9UKR0 248 aa3.9□□□□□ -1.79
R3HDM1-202ENST00000409478 DEFB130BP0DP73 79 aa3.89□□□□□ -1.79
R3HDM1-202ENST00000409478 DEFB130AP0DP74 79 aa3.89□□□□□ -1.79
R3HDM1-202ENST00000409478 MGAM2Q2M2H8 2515 aa3.89□□□□□ -1.79
R3HDM1-202ENST00000409478 CRYBG3Q68DQ2 2970 aa3.89□□□□□ -1.79
R3HDM1-202ENST00000409478 M0R378 163 aa3.89□□□□□ -1.79
R3HDM1-202ENST00000409478 A8MUN3 132 aa3.88□□□□□ -1.79
R3HDM1-202ENST00000409478 LIMD2Q9BT23 127 aa3.88□□□□□ -1.79
R3HDM1-202ENST00000409478 IGLV5-48A0A075B6I7 105 aa3.88□□□□□ -1.79
R3HDM1-202ENST00000409478 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.88□□□□□ -1.79
R3HDM1-202ENST00000409478 SMR3AQ99954 134 aa3.88□□□□□ -1.79
R3HDM1-202ENST00000409478 NDUFS5O43920 106 aa3.87□□□□□ -1.79
R3HDM1-202ENST00000409478 KPRPQ5T749 579 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms